EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCUA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium ulcerans (strain Agy99) GN=sucC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.915e-23 Identity = 57/191 (29.84%), Postives = 95/191 (49.74%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 ++V Q+ GGRG K+G G + ++ + + +LG + +G +V K+ + E + E Y + +LDR + + +GG IE++A P+ + KVP+D G+ A + + L +V D A + KL+ LF D TL+E+NPL +T Q++A D K+ D NA FR Sbjct: 42 VMVKAQVKIGGRG----KAG--GVKYAATPDDAYEHANNILGLDI-------KGHVVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVDAAKGVDLAFARSIAEQGHLPAEVLDA--AAVTISKLWDLFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFR 217 HSP 2 Score: 45.8246 bits (107), Expect = 1.915e-23 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG++G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCMM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=sucC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.915e-23 Identity = 57/191 (29.84%), Postives = 95/191 (49.74%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 ++V Q+ GGRG K+G G + ++ + + +LG + +G +V K+ + E + E Y + +LDR + + +GG IE++A P+ + KVP+D G+ A + + L +V D A + KL+ LF D TL+E+NPL +T Q++A D K+ D NA FR Sbjct: 42 VMVKAQVKIGGRG----KAG--GVKYAATPDDAYEHANNILGLDI-------KGHVVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVDAAKGVDLAFARSIAEQGHLPAEVLDA--AAVTISKLWDLFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFR 217 HSP 2 Score: 45.8246 bits (107), Expect = 1.915e-23 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG++G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_FRATH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. holarctica (strain LVS) GN=sucC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.999e-23 Identity = 81/271 (29.89%), Postives = 134/271 (49.45%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 K VV Q+ AGGRG GGV +VK +E +++ ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + LL + + S ++L+++ ++G ++ IQ++GG A L++GG K R +E Sbjct: 41 KFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGIFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPK-LLALRDKSQENAKELKASEHELNYVALEGNIGCMVNG--AGLAMATMDIIQLYGGKPANFLDVGGGATKERVIE 301
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_FRATF (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=sucC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.999e-23 Identity = 81/271 (29.89%), Postives = 134/271 (49.45%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 K VV Q+ AGGRG GGV +VK +E +++ ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + LL + + S ++L+++ ++G ++ IQ++GG A L++GG K R +E Sbjct: 41 KFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGIFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPK-LLALRDKSQENAKELKASEHELNYVALEGNIGCMVNG--AGLAMATMDIIQLYGGKPANFLDVGGGATKERVIE 301
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_FRATT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. tularensis GN=sucC PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.611e-23 Identity = 81/271 (29.89%), Postives = 134/271 (49.45%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 K VV Q+ AGGRG GGV +VK +E +++ ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + LL + + S ++L+++ ++G ++ IQ++GG A L++GG K R +E Sbjct: 41 KFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPK-LLALRDKSQENAKELKASEHELNYVALEGNIGCMVNG--AGLAMATMDIIQLYGGKPANFLDVGGGATKERVIE 301
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_FRATO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=sucC PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.611e-23 Identity = 80/271 (29.52%), Postives = 134/271 (49.45%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 K V+ Q+ AGGRG GGV +VK +E +++ ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + LL + + S ++L+++ ++G ++ IQ++GG A L++GG K R +E Sbjct: 41 KFAVIKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGIFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPK-LLALRDKSQENAKELKASEHELNYVALEGNIGCMVNG--AGLAMATMDIIQLYGGKPANFLDVGGGATKERVIE 301
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_FRATN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. novicida (strain U112) GN=sucC PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.611e-23 Identity = 81/271 (29.89%), Postives = 134/271 (49.45%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 K VV Q+ AGGRG GGV +VK +E +++ ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + LL + + S ++L+++ ++G ++ IQ++GG A L++GG K R +E Sbjct: 41 KFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPK-LLALRDKSQENAKELKASEHELNYVALEGNIGCMVNG--AGLAMATMDIIQLYGGKPANFLDVGGGATKERVIE 301
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_FRATM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=sucC PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.611e-23 Identity = 81/271 (29.89%), Postives = 134/271 (49.45%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 K VV Q+ AGGRG GGV +VK +E +++ ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + LL + + S ++L+++ ++G ++ IQ++GG A L++GG K R +E Sbjct: 41 KFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPK-LLALRDKSQENAKELKASEHELNYVALEGNIGCMVNG--AGLAMATMDIIQLYGGKPANFLDVGGGATKERVIE 301
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_FRAT1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=sucC PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.611e-23 Identity = 81/271 (29.89%), Postives = 134/271 (49.45%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 K VV Q+ AGGRG GGV +VK +E +++ ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + LL + + S ++L+++ ++G ++ IQ++GG A L++GG K R +E Sbjct: 41 KFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPK-LLALRDKSQENAKELKASEHELNYVALEGNIGCMVNG--AGLAMATMDIIQLYGGKPANFLDVGGGATKERVIE 301
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PYRAE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pyrobaculum aerophilum GN=sucC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.243e-23 Identity = 55/192 (28.65%), Postives = 97/192 (50.52%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPK--VADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +V+ Q++ GRG GG+ + EE +LS +M G + +G IV K+Y+ + + + EMY ++++DR + + + GG IE++A+ P I +V +D G+ D +V L K + A V+ +Y++ + D L+E NPLA T +++ DA++ DDNA F+ Sbjct: 42 VVLKAQVVVAGRGKA-------GGIKVANSPEEAYELSKRMFGMNI-------KGLIVKKLYVTKFVEVEREMYLSLIIDRASRRYLFLASPVGGMDIEEIAKTSPEKIKRVYVDPATGLRDYHVRSIVSWLGFKQGTSQWQQAASIVQAMYRIMVDYDAELVESNPLAVTKEGEVIPLDARVIVDDNALFK 219 HSP 2 Score: 42.3578 bits (98), Expect = 3.243e-23 Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 1 Query: 622 QDDPRYVA-----ADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DPR V A K +Y+ LDG++G + NGAGL +ATMD+ + G Sbjct: 228 EEDPRDVTEFEAYAKKIGFHYVELDGDVGIIGNGAGLTMATMDLVYHFGG 277 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |