EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_CLAM3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=sucC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.865e-22 Identity = 56/194 (28.87%), Postives = 96/194 (49.48%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVE-DLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQV----KKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +VV Q+ GGRG GGV + + + + + +LG + +G V +V + + E YF+I+LDR + + +GG IE+LA P + ++ ID GI DAAK + +A + + I +V ++L+ ++ + D TL+E+NPL T +++A D K+ D+NA R Sbjct: 42 VVVKAQVKTGGRGKA-------GGVKVAQSADAAFEAAEGILGLDI-------KGHTVHRVMVAAGARIAQEFYFSILLDRAERSYLCLASYEGGMEIEELAVTRPEALARIEIDPVAGI---DAAK-AEEIARAASFPEELIAKVAPVFERLWWVYRDEDATLVEVNPLVLTESGEIIALDGKVTLDENAGLR 217 HSP 2 Score: 46.9802 bits (110), Expect = 5.865e-22 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP A ++D+NY+ LDG++G + NGAGL ++T+D+ Y Sbjct: 231 DPLEAKAKESDLNYVKLDGQVGIIGNGAGLVMSTLDVVSY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_METTH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Methanobacterium thermoautotrophicum GN=sucC PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.872e-22 Identity = 62/199 (31.16%), Postives = 104/199 (52.26%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVK----KLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYL 605 ++ V Q+L GGRG GG+ V +++G +L + +G+ V KV + EK+ + E+Y + ++DR P+I+ ++GG IE+LA + P IV+ I+ + +A ++ A K+ ++ I V KLY+LF + D L EINPL SG ++AADAKL DD++ +R ++ Sbjct: 41 DVAVKSQVLTGGRGKA-------GGIRFASPSGVAEVTGDLLSSEV-------RGETVEKVLIEEKIPIDRELYVSAVIDRTAKMPLIMASAEGGVDIEELAARSPEKIVRYHINPLDEFLPYEAREI----ARKMGLESELIPSVGGVIWKLYQLFRKYDARLAEINPLV-ISGDSVIAADAKLEVDDDSIYRHREFM 220 HSP 2 Score: 31.9574 bits (71), Expect = 5.872e-22 Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 1 Query: 667 YIGLDGEIGCMVNGAGLALATMDIFK 744 ++ LDG+I + NGAGL L MD+ K Sbjct: 232 FVKLDGDIAVIGNGAGLTLTAMDLIK 257
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_TERTT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=sucC PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.430e-22 Identity = 88/276 (31.88%), Postives = 130/276 (47.10%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NW--LHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV +VK K E+E+ + + LG+ LVT QT G+ VS++ + + E+Y ++DR T + + ++GG IE +AE+ P I+K ID G A LA K+ I+Q +++ K+F E D LLEINPL T L DAK+N D NA +RQ ++ + + H W N+ L G ++ G +++HGG A L++GG K R VE Sbjct: 44 VVKAQVHAGGRGKA-------GGVKLVKSKAEIEEFAKQWLGKNLVTYQTDENGQPVSRILVETCTDIDQELYLGAVVDRSTRRIVFMASTEGGVEIEKVAEETPEKILKAIIDPLAGAQPYQAR----DLAFKLGLEGKQIKQFTQIFLGLAKMFKEKDLALLEINPLVITKEGDLHCLDAKINIDGNALYRQPALKEMHDPSQ--------EDEREAHAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVGGGATKERVVE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_ALISL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aliivibrio salmonicida (strain LFI1238) GN=sucC PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.430e-22 Identity = 86/276 (31.16%), Postives = 132/276 (47.83%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NW--LHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV + KE V++ + K LG+ LVT QT +G+ V+KV + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I + ID G + LA K+ D I+Q K++ +F + D LLEINPL T+ L+ D K+N D NA +RQ + ++ + + H W N+ L G ++ G + +HGG A L++GG K R E Sbjct: 44 VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTFQTDAKGQPVTKVLVEEASNIANELYLGAVVDRATRRIVFMASTEGGVDIEKIAEETPELIHQAAIDPLVGPQAFQGRE----LAFKLGLEGDQIKQFVKIFLGLGNMFAQYDLALLEINPLVVTAEGNLLCLDGKINIDSNAMYRQPKLREMHDPSQ--------EDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVGGGATKERVTE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_STRGG (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=sucC PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.628e-22 Identity = 60/192 (31.25%), Postives = 95/192 (49.48%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAI-EQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 VV Q+ GGRG GGV + +E + +LG + +G V KV + E + E Y + +LDR + + +GG IE++AEK P + KVP++ +G+ A ++V A AD + + E + L+ F D L+E+NPL KT +++A D K++ D+NA FRQ Sbjct: 43 VVKAQVKVGGRGKA-------GGVKLAADPDEAVARATDILGMDI-------KGHTVHKVMIAELSPEIEAEYYVSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVNAVDGVDIAKAREIV-AQAKFPADVAEGVAEALVTLWDTFVAEDALLVEVNPLVKTKDGRILALDGKVSLDENADFRQ 219 HSP 2 Score: 44.2838 bits (103), Expect = 7.628e-22 Identity = 18/40 (45.00%), Postives = 28/40 (70.00%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 +P AA ++NY+ LDGE+G + NGAGL ++T+D+ Y Sbjct: 232 NPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAY 271
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_STAMF (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=sucC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.633e-22 Identity = 57/197 (28.93%), Postives = 97/197 (49.24%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGIT---DEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRY 602 E+V+ Q+L G RGL GGV L + + + L +K+ +G+ V + + EK+ + E Y ++ +DR + + GG IE+L +KYP+ ++++ +D G AAK + GL ++ I + +Y + D L+E NPL KT ++VA DAK+ DDN+ +R I + Sbjct: 41 EVVLKAQVLVGRRGLA-------GGVLFASNS----LEAEKVARELFSKRV--RGEKVELILVEEKICIDKEYYLSLTIDRSNREIVYLVSPLGGVEIEELVKKYPDKLLRIRVDPVIGYKPYMSRLAAKFL-GLPKELWPSMHKI--MNSMYNIMKNYDADLVEFNPLVKTCSNEIVAVDAKITIDDNSLYRHIEF 221 HSP 2 Score: 43.8986 bits (102), Expect = 7.633e-22 Identity = 20/37 (54.05%), Postives = 25/37 (67.57%), Query Frame = 1 Query: 646 ADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 A K +Y+ LDG+IG M NGAGL +ATMD+ Y G Sbjct: 236 AKKLGFSYVELDGDIGIMCNGAGLTMATMDMVAYYGG 272
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_FRASC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Frankia sp. (strain CcI3) GN=sucC PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 9.926e-22 Identity = 56/190 (29.47%), Postives = 92/190 (48.42%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +VV Q+ GGRG GGV + ++ + +LG + +G V V + E ++ E Y + +LDR + + +GG IE++A P + ++ ID G+ A ++ A + A E + KL+ +F +SD TL+E+NPL T ++VA D K++ DDNA FR Sbjct: 42 VVVKAQVKTGGRGKA-------GGVKVADGPDDAFAKATAILGMDI-------KGHTVHSVLVEEASNIAEEYYASFLLDRANRTFLAMASREGGMEIEEVAATKPEALARIAIDPLKGVDAAKAREIAVAAKLPEAALDGASELLAKLWTVFVKSDATLVEVNPLILTGDGRVVALDGKVSLDDNADFR 217 HSP 2 Score: 41.9726 bits (97), Expect = 9.926e-22 Identity = 17/40 (42.50%), Postives = 27/40 (67.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP A + +NY+ L+GE+G + NGAGL ++T+D+ Y Sbjct: 231 DPLEQKAKEKGLNYVKLEGEVGIIGNGAGLVMSTLDVVTY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_SODGM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sodalis glossinidius (strain morsitans) GN=sucC PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.097e-21 Identity = 83/273 (30.40%), Postives = 130/273 (47.62%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV +VK KEE+ + + LG+ LVT QT G+ V+++ + + E+Y +++DR T + + ++GG IE +AE+ P++I KV +D G + LA K+ + Q K++ LF E D L+EINPL T L+ D KL+ D NA FRQ H++ + +L+++ L G ++ G +++HGG A L++GG K R E Sbjct: 44 VVKCQVHAGGRGKS-------GGVKVVKLKEEIRAFAEQWLGKRLVTYQTDALGQPVNQILVEVATDIAKELYLGVVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPQPYQGRE----LAFKLGLSGKQVSQFSKIFMGLATLFLERDLALVEINPLVITGAGDLICLDGKLSADGNALFRQPELREMRDHSQ-EDEREAHATQLELNYVA----LDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PHOPR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Photobacterium profundum GN=sucC PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.433e-21 Identity = 85/276 (30.80%), Postives = 132/276 (47.83%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NW--LHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV I K+ V++ + K LG+ LVT QT +G+ V+K+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I + ID G + LA K+ D I+Q K++ +F + D LLEINPL T+ L+ D K+N D NA +RQ + ++ + + H W N+ L G ++ G + +HGG A L++GG K R E Sbjct: 44 VVKCQVHAGGRGKA-------GGVEIHDTKDGVKEFAQKWLGKNLVTFQTDAKGQPVTKILVEEASNIANELYLGAVVDRATRRIVFMASTEGGVDIEKIAEETPELIHQAAIDPLVGPQPYQGRE----LAFKLGLVGDQIKQFVKIFLGLGNMFAQYDLALLEINPLVVTAEGNLLCLDGKINIDSNAMYRQPKLREMHDPSQ--------EDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVGGGATKERVTE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_VIBPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio parahaemolyticus GN=sucC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.871e-21 Identity = 85/276 (30.80%), Postives = 131/276 (47.46%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NW--LHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV + KE V++ + K LG+ LVT QT G+ V+K+ + E ++ NE+Y ++DR + + + ++GG IE +AE+ P +I K ID G + LA K+ D I+Q K++ +F + D LLEINPL T+ L+ D K+N D NA +RQ + ++ + + H W N+ L G ++ G + +HGG A L++GG K R E Sbjct: 44 VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYLGAVVDRASRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLEGDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITAEGNLLCLDGKINIDSNALYRQPKLREMHDPSQ--------EDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE 300 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |