EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PSEAB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sucC PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.069e-20 Identity = 82/273 (30.04%), Postives = 129/273 (47.25%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 E VV Q+ AGGRG GGV +VK KE+ + + + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A P I+KV ID G + LA ++ + D I+Q ++ KLF + D LLE+NPL L DAK+N D NA +RQ + L + ++L+++ ++G ++ G + +HGG A L++GG K R E Sbjct: 42 EWVVKAQVHAGGRGKA-------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKVTIDPLVGAQPYQGRE----LAFQLGLKGDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPK-LRAMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNG--AGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_AZOVD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=sucC PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.069e-20 Identity = 81/276 (29.35%), Postives = 126/276 (45.65%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NWLHGE--------WCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 V +Q+ AGGRG GGV +VK +EE + + LG+ LVT QT G+ V K+ + + E+Y ++DR + + + ++GG +IE +A + P I+K ID G A LA ++ D ++Q ++ KLF E D L+E+NPL L+ DAK+N D NA FRQ R ++ ++H W N++ E ++ G + +HGG A L++GG K R E Sbjct: 44 VAKVQVHAGGRGKA-------GGVKLVKSREEAKVFAVNWLGKRLVTYQTDASGQPVGKILVEACTEIERELYLGAVVDRSSRRIVFMASTEGGVNIEQVAHETPEKILKASIDPLVGAQPFQAR----DLAFRLGLEGDQLKQFTHIFIGLAKLFQEHDLALVEVNPLVVQKDGNLLCLDAKINLDTNALFRQPRLRAMHDPSQ--------DDPREVHAAKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGRPANFLDVGGGATKERVTE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_ALTMD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=sucC PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.069e-20 Identity = 81/272 (29.78%), Postives = 125/272 (45.96%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 +E VV Q+ AGGRG GGV +VK K+++ + LG+ LVT QT G+ VSK+ + + NE+Y ++DR T + + ++GG IE +AE+ P I+K ID G A ++ L + L K+F E D L+EINPL + L DAK+ D NA +RQ + L + + ++L+++ L G ++ G + +HGG A L++GG K R E Sbjct: 41 EEWVVKCQVHAGGRGKA-------GGVKLVKNKDDIRAFAENWLGKNLVTFQTDENGQPVSKILVESCTDIANELYLGAVVDRTTRRVVFMASTEGGVEIETVAEETPEKILKAEIDPIVGPQPYQAREMAFALGLSGVQIKQFTQIFLGLAKMFEELDVALIEINPLVIKTDGNLHCLDAKVGIDGNALYRQPK-LKDMQDPSQEDAREAHAAQWELNYVA----LDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_FRASN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Frankia sp. (strain EAN1pec) GN=sucC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.330e-20 Identity = 54/192 (28.12%), Postives = 97/192 (50.52%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV-VDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 ++VV Q+ AGGRG GGV + ++ + + +LG + +G V V + + ++ E Y + +LDR + + +GG IE++A P + ++ ID G+ A ++ V P+ A ++ VK L+++F ++D TL+E+NPL T +++A D K+ D+NA FR Sbjct: 41 KVVVKAQVKAGGRGKA-------GGVKVADGPDDAFEKASAILGMDI-------KGHTVHSVLVEQASNIAEEYYASFLLDRANRTFLAMASREGGMEIEEVAATNPEALARIHIDPLTGVDAAKAREIAVAAKLPEAAIEGASVLLVK-LWEVFVKADATLVEVNPLILTGDGKVIALDGKVTLDENADFR 217 HSP 2 Score: 40.817 bits (94), Expect = 2.330e-20 Identity = 16/40 (40.00%), Postives = 27/40 (67.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP A + +NY+ L+G++G + NGAGL ++T+D+ Y Sbjct: 231 DPLEQKAKEKGLNYVKLEGQVGIIGNGAGLVMSTLDVVTY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PSEMY (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas mendocina (strain ymp) GN=sucC PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.528e-20 Identity = 81/278 (29.14%), Postives = 126/278 (45.32%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NWLHGE--------WCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 E VV Q+ AGGRG GGV +VK KE+ + + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A + P I+K ID G + LA ++ D ++Q ++ KLF + D LLE+NPL + L DAK+N D NA +RQ + ++ + H W N++ E ++ G + +HGG A L++GG K R E Sbjct: 42 EWVVKAQVHAGGRGKA-------GGVKLVKSKEDAKAFAANWLGKRLVTYQTDANGQPVSKILVESCTDIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPYQGRE----LAFQLGLEGDQVKQFTHIFVGLAKLFQDYDLALLEVNPLVIKADGNLHCLDAKINIDSNAMYRQPKLRAMHDPSQ--------DDPREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVGGGATKERVTE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PSEAE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas aeruginosa GN=sucC PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 6.019e-20 Identity = 81/273 (29.67%), Postives = 128/273 (46.89%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 E VV Q+ AGGRG GGV +VK KE+ + + + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A P I+K ID G + LA ++ + D I+Q ++ KLF + D LLE+NPL L DAK+N D NA +RQ + L + ++L+++ ++G ++ G + +HGG A L++GG K R E Sbjct: 42 EWVVKAQVHAGGRGKA-------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRE----LAFQLGLKGDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPK-LRAMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNG--AGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PSEA8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas aeruginosa (strain LESB58) GN=sucC PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.019e-20 Identity = 81/273 (29.67%), Postives = 128/273 (46.89%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 E VV Q+ AGGRG GGV +VK KE+ + + + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A P I+K ID G + LA ++ + D I+Q ++ KLF + D LLE+NPL L DAK+N D NA +RQ + L + ++L+++ ++G ++ G + +HGG A L++GG K R E Sbjct: 42 EWVVKAQVHAGGRGKA-------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRE----LAFQLGLKGDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPK-LRAMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNG--AGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PSEA7 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas aeruginosa (strain PA7) GN=sucC PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.019e-20 Identity = 81/273 (29.67%), Postives = 128/273 (46.89%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 E VV Q+ AGGRG GGV +VK KE+ + + + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A P I+K ID G + LA ++ + D I+Q ++ KLF + D LLE+NPL L DAK+N D NA +RQ + L + ++L+++ ++G ++ G + +HGG A L++GG K R E Sbjct: 42 EWVVKAQVHAGGRGKA-------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRE----LAFQLGLKGDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPK-LRAMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNG--AGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PSEPW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain W619) GN=sucC PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.861e-20 Identity = 79/273 (28.94%), Postives = 129/273 (47.25%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 E VV Q+ AGGRG GGV +V+ KE+ + + + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A + P I+K ID G + LA ++ ++Q K++ KLF + D LLE+NPL + L DAK+N D NA +RQ + L + ++L+++ ++G ++ G + +HGG A L++GG K R E Sbjct: 42 EWVVKAQVHAGGRGKA-------GGVKLVRSKEDAKAFAAQWLGKNLVTYQTDANGQPVSKILVESCTDIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPFQGRE----LAFQLGLEGKQVQQFAKIFVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPK-LKTFHDPSQDDAREAHAAKFELNYVALEGNIGCMVNG--AGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PSEPK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain KT2440) GN=sucC PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.861e-20 Identity = 79/273 (28.94%), Postives = 129/273 (47.25%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 E VV Q+ AGGRG GGV +V+ KE+ + + + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A + P I+K ID G + LA ++ ++Q K++ KLF + D LLE+NPL + L DAK+N D NA +RQ + L + ++L+++ ++G ++ G + +HGG A L++GG K R E Sbjct: 42 EWVVKAQVHAGGRGKA-------GGVKLVRSKEDAKAFAAQWLGKNLVTYQTDANGQPVSKILVESCTDIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPFQGRE----LAFQLGLEGKQVQQFAKIFVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPK-LKTFHDPSQDDAREAHAAKFELNYVALEGNIGCMVNG--AGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE 300 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |