EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_SULDN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=sucC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.555e-43 Identity = 81/192 (42.19%), Postives = 114/192 (59.38%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRND---AIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRGLG GGV + + EEVE LS ++LG LVT QTGP+GK+V K+Y+ E + E+Y ++LDR P+I+ ++GG +IED+A P I+K+ +D G ++V GL + D N+ I KLYKL+ E+D ++EINPL KT + +A D K+ FDD+A R Sbjct: 44 VVKAQIHAGGRGLG-------GGVKLARSLEEVEQLSKEILGMTLVTHQTGPEGKLVQKLYIEEGADIKEELYLGVVLDRAREMPVIMASTEGGMAIEDVAHNTPEKIIKIAVDPAIGFQGFHGRELVFGLG--ITDPNEQKKLISFASKLYKLYMENDAEMIEINPLVKTGSGEFLALDGKMGFDDSALGR 226 HSP 2 Score: 55.0694 bits (131), Expect = 3.555e-43 Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 +++D A K ++Y+ LDGEIGCMVNGAGLA+ TMD YM G Sbjct: 237 SEEDADEREAGKYGLSYVSLDGEIGCMVNGAGLAMGTMDTINYMGG 282
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_BACP2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus pumilus (strain SAFR-032) GN=sucC PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 4.633e-43 Identity = 77/190 (40.53%), Postives = 111/190 (58.42%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 VV QI AGGRG GGV I K K+EV+ + ++LG+ LVT QTGP+G+ + ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P IVKV ID G+ A +V + A++ + LY F E DC++ EINPL T +++A DAKLNFD NA +RQ Sbjct: 44 VVKAQIHAGGRGKA-------GGVKIAKTKDEVKGFAEELLGKTLVTHQTGPEGREIKRLLIEEGCDIQKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVVIDPAIGLQGYQAREVAFKINIPTKLVGQAVKFMTSLYNAFIEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQ 226 HSP 2 Score: 63.1586 bits (152), Expect = 4.633e-43 Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DP+ + A K D++YI LDG IGCMVNGAGLA++TMDI K+ G Sbjct: 237 EEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_BACLD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=sucC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 6.038e-43 Identity = 78/190 (41.05%), Postives = 110/190 (57.89%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 VV QI AGGRG GGV I K KEEV+ + ++LG+ LVT QTGP G+ + ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P IVK ID G+ A K+ + A++ + LYK F E DC++ EINPL T +++A DAKLNFD NA +RQ Sbjct: 44 VVKAQIHAGGRGKA-------GGVKIAKSKEEVKAYAEELLGKTLVTHQTGPDGQQIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKEVIDPAVGLQSYQARKIAFAINIPKELVGQAVKFMMGLYKAFTEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQ 226 HSP 2 Score: 63.1586 bits (152), Expect = 6.038e-43 Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DP+ + A K D++YI LDG IGCMVNGAGLA++TMDI K+ G Sbjct: 237 EEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_GEOSW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus sp. (strain WCH70) GN=sucC PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.867e-43 Identity = 72/189 (38.10%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG GGV + K +EV + ++LG++LVT QTGP+GK V ++ + E + E Y +++DR T+ +++G +GGT IE++A K P I K ID G+ A ++ + N A++ + LY++F + DC++ EINPL T +++A DAKLNFD NA +R Sbjct: 44 VVKAQIHAGGRGKA-------GGVKVAKSLDEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIKKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARRLAFNINIPKELVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYR 225 HSP 2 Score: 68.5514 bits (166), Expect = 7.867e-43 Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DP+ V A K D+NYI LDG IGCMVNGAGLA+ATMDI KY G Sbjct: 237 EEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_DESAA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfatibacillum alkenivorans (strain AK-01) GN=sucC PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.184e-42 Identity = 78/190 (41.05%), Postives = 116/190 (61.05%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +VV QI AGGRG G GGV + + +EV+ ++G++LG LVT QTGP+G+ V K+ + + L + E+YF+I++DR TA +I+ GG IE++A P I+KVP+D G+ + L A I+ V+ LYK+F ++DC+LLEINPL T ++A DAK+NFDD+A +R Sbjct: 43 VVVKAQIHAGGRGKG-------GGVKLAQNIDEVKTIAGEILGMQLVTHQTGPEGQKVQKLLVEQGLDIAKELYFSIIVDRATAKIVIMCSEAGGMDIEEVAASTPEKIIKVPVDPLLGVQGYHCRQAAYRLNLPPAAIKPFIKMVQGLYKMFMDTDCSLLEINPLVLTGDDGIIALDAKINFDDSALYR 225 HSP 2 Score: 53.5286 bits (127), Expect = 1.184e-42 Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744 +++P V A K ++NYI +DG +G MVNGAGLA+ATMDI K Sbjct: 237 EEEPLEVEASKFNLNYIKMDGNVGNMVNGAGLAMATMDIIK 277 HSP 3 Score: 22.3274 bits (46), Expect = 1.184e-42 Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 776 VGGNASEGQVXGGFKL*LS 832 VGG A+ QV GF++ LS Sbjct: 289 VGGGANAEQVENGFRIILS 307
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_RHOCS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=sucC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.740e-42 Identity = 80/191 (41.88%), Postives = 115/191 (60.21%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGL--KGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G FK KGGV +VK ++V + MLG++LVTKQTGP+GK V ++Y+ E + E+Y +++LDR T+ I+ ++GG IE++A P IVKV ID G+ A KV L + + + +YK F + D +L+E+NPL T +++A DAK+NFDDNA +R Sbjct: 44 VVKSQIHAGGRGAGRFKDDPNGKGGVRVVKSIDDVVASTDAMLGKVLVTKQTGPEGKEVKRIYVEEGADIKRELYLSMLLDRATSRITIVASTEGGMEIEEVAHTSPEKIVKVAIDPVQGLQGYHARKVAFALGLEGKQVGACTKFLLGMYKAFTDLDMSLVEVNPLVVTGSGEVLALDAKVNFDDNALYR 234 HSP 2 Score: 53.1434 bits (126), Expect = 1.740e-42 Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++++ A + +NY+ LDG IGCMVNGAGLA+ATMDI K G Sbjct: 245 SEEEASETEATRHGLNYVKLDGNIGCMVNGAGLAMATMDIIKLYGG 290
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_ALKOO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alkaliphilus oremlandii (strain OhILAs) GN=sucC PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.002e-42 Identity = 78/189 (41.27%), Postives = 107/189 (56.61%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG GGV I K EVE S ++LG+ LVT QTG +G++V + + E + E Y A LDR+ + +I +GG IE++A P+ I+K ID G+TD +V L + ND +E +K LY+ F E DC+LLEINPL T +++A DAK+NFD N +R Sbjct: 44 VVKAQIHAGGRGKA-------GGVKIAKSITEVEQFSRELLGKTLVTHQTGQEGRVVKAILIEEGCEIYKEYYIAFTLDRENSKIALIASEEGGMDIEEVAANRPDKILKEIIDPLIGLTDFQGRRVCFNLNIDGSLINDTVELMKNLYRCFIEKDCSLLEINPLVITKNNRVMALDAKINFDGNGLYR 225 HSP 2 Score: 58.151 bits (139), Expect = 2.002e-42 Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++D + + A K +++YI LDG IGCMVNGAGLA+ATMDI K G Sbjct: 237 EEDEKEIEASKYNLSYISLDGNIGCMVNGAGLAMATMDIIKLYGG 281 HSP 3 Score: 23.0978 bits (48), Expect = 2.002e-42 Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 776 VGGNASEGQVXGGFKL*LS 832 VGG ASE +V FK+ LS Sbjct: 289 VGGGASEEKVMNAFKIILS 307
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_STAS1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sucC PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.955e-42 Identity = 76/194 (39.18%), Postives = 108/194 (55.67%), Query Frame = 3 Query: 12 DHKELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 D K VV QI AGGRG GGV I K EVE + ++LG+ LVT QTGP+GK + ++Y+ E + E Y ++DR T ++ +GGT IE++A K P I K ID G+ A ++ + N A + + LY +F E DC+++EINPL T +++A DAK+NFDDNA F+ Sbjct: 39 DSKVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCDIQKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLAPYQARRIAFNINIPKESINKAAKFLVSLYNVFIEKDCSIVEINPLVTTGEGEVLALDAKVNFDDNALFK 225 HSP 2 Score: 61.6178 bits (148), Expect = 2.955e-42 Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DP+ + A K D++YI LDG+IGCMVNGAGLA+ATMD + G Sbjct: 237 EEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MESSB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mesorhizobium sp. (strain BNC1) GN=sucC PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.850e-42 Identity = 79/192 (41.15%), Postives = 110/192 (57.29%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G FK KGGV + K EEV + +MLG LVTKQTGP+GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P I+ + I G+T++D K+ L A D LYK F E D +LLE+NPL +L DAK++FD+NA FR Sbjct: 44 VVKSQIHAGGRGKGKFKELSPDAKGGVRLAKSIEEVVANAKEMLGNTLVTKQTGPEGKQVNRLYIEDGADIARELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKILTLAIAPERGVTNDDVTKLNAALKLDGAAAKDGETLFPILYKAFTEKDMSLLEVNPLIVMQNGRLRVLDAKVSFDNNALFR 235 HSP 2 Score: 59.3066 bits (142), Expect = 3.850e-42 Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744 +++D + + A K D+ Y+ LDG+IGCMVNGAGLA+ATMDI K Sbjct: 246 SEEDEKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIK 287
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_CAUSK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Caulobacter sp. (strain K31) GN=sucC PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 6.537e-42 Identity = 75/192 (39.06%), Postives = 108/192 (56.25%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G FK KGGV +VK E+V+ + +MLG++LVT QTGP+GK V+++Y+ E ++ E Y ++++DR+T+ ++ ++GG IED+A P I ID G+ A + L +A + +LY F D +LEINPL T L DAKL+FD NA +R Sbjct: 44 VVKSQIHAGGRGKGKFKGLGPDAKGGVRVVKSVEDVKTNAAEMLGRVLVTHQTGPKGKQVNRLYVEEGAAIAKEFYLSLLVDRETSMVSVVASTEGGMDIEDVAHATPEKIHSFSIDPATGVWPTHARALAKALGLTGGLAKEAATLLGQLYTAFLAKDMAMLEINPLIVTEDDHLKVLDAKLSFDGNALYR 235 HSP 2 Score: 63.929 bits (154), Expect = 6.537e-42 Identity = 28/42 (66.67%), Postives = 35/42 (83.33%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744 +++DP+ + A K D+ YI LDGEIGCMVNGAGLA+ATMDI K Sbjct: 246 SEEDPKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIIK 287 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |