EY659243
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_STAA8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain NCTC 8325) GN=sucC PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.539e-42 Identity = 75/189 (39.68%), Postives = 108/189 (57.14%), Query Frame = 3
Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590
VV QI AGGRG GGV I K EVE + ++LG+ LVT QTGP+GK + ++Y+ E ++ E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T+ ++A DAK+NFDDNA FR
Sbjct: 44 VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFR 225 HSP 2 Score: 61.6178 bits (148), Expect = 6.539e-42 Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756
++DP+ + A K D++YI LDG+IGCMVNGAGLA+ATMD + G
Sbjct: 237 EEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_STAA3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain USA300) GN=sucC PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.539e-42 Identity = 75/189 (39.68%), Postives = 108/189 (57.14%), Query Frame = 3
Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590
VV QI AGGRG GGV I K EVE + ++LG+ LVT QTGP+GK + ++Y+ E ++ E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T+ ++A DAK+NFDDNA FR
Sbjct: 44 VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFR 225 HSP 2 Score: 61.6178 bits (148), Expect = 6.539e-42 Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756
++DP+ + A K D++YI LDG+IGCMVNGAGLA+ATMD + G
Sbjct: 237 EEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_STAA2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain JH1) GN=sucC PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.539e-42 Identity = 75/189 (39.68%), Postives = 108/189 (57.14%), Query Frame = 3
Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590
VV QI AGGRG GGV I K EVE + ++LG+ LVT QTGP+GK + ++Y+ E ++ E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T+ ++A DAK+NFDDNA FR
Sbjct: 44 VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFR 225 HSP 2 Score: 61.6178 bits (148), Expect = 6.539e-42 Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756
++DP+ + A K D++YI LDG+IGCMVNGAGLA+ATMD + G
Sbjct: 237 EEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_STAA1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=sucC PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.539e-42 Identity = 75/189 (39.68%), Postives = 108/189 (57.14%), Query Frame = 3
Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590
VV QI AGGRG GGV I K EVE + ++LG+ LVT QTGP+GK + ++Y+ E ++ E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T+ ++A DAK+NFDDNA FR
Sbjct: 44 VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFR 225 HSP 2 Score: 61.6178 bits (148), Expect = 6.539e-42 Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756
++DP+ + A K D++YI LDG+IGCMVNGAGLA+ATMD + G
Sbjct: 237 EEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_BACA2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus amyloliquefaciens (strain FZB42) GN=sucC PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 6.539e-42 Identity = 75/190 (39.47%), Postives = 109/190 (57.37%), Query Frame = 3
Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593
VV QI AGGRG GGV I K K+EV++ + ++LG+ LVT QTGP G+++ ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P I K ID G+ A ++ + A + + LYK F E DC++ EINPL T ++A DAKLNFD NA +RQ
Sbjct: 44 VVKAQIHAGGRGKA-------GGVKIAKTKDEVKEYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQ 226 HSP 2 Score: 63.1586 bits (152), Expect = 6.539e-42 Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756
++DP+ + A K D++YI LDG IGCMVNGAGLA++TMDI K+ G
Sbjct: 237 EEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_BACHD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus halodurans GN=sucC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 6.539e-42 Identity = 75/190 (39.47%), Postives = 109/190 (57.37%), Query Frame = 3
Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593
VV QI AGGRG GGV + K +EV + ++LG+ LVT QTGP+GK V ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P I K ID G+ A ++ + A++ + LYK+F E DC++ EINPL T +++A DAKLNFD NA +RQ
Sbjct: 44 VVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYADEILGKTLVTHQTGPEGKEVKRLLIEEGCDIQKEYYVGLVLDRATSRVVMMASEEGGTEIEEVAEKTPEKIFKEIIDPVVGLQGFQARRLAFNINIPKELVGQAVKFMLGLYKVFVEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRQ 226 HSP 2 Score: 64.3142 bits (155), Expect = 6.539e-42 Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756
++DP+ + A K D++YI LDG IGCMVNGAGLA+ATMDI K+ G
Sbjct: 237 EEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYNG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_ACIC5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=sucC PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.519e-42 Identity = 79/192 (41.15%), Postives = 108/192 (56.25%), Query Frame = 3
Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590
K +VV QI AGGRG G GGV + K EE E + ++LG LVT QTGPQG+ V ++ + E ++ E+Y I+LDR A + + GG IE++A K P+ I K ID G A ++ L K NDA++ + LYK + ++D +LLEINP T +L A D K+NFDDNA FR
Sbjct: 44 KGVVVKAQIHAGGRGKG-------GGVKVAKTLEEAEQYAKQILGMQLVTHQTGPQGQKVQRLLIEETAAIDRELYLGIVLDRAAAKLVFMASQAGGMEIEEVAAKDPSAIFKAYIDPAVGFQAYQARQLAFALGLKPTQINDAVKFMMGLYKAYMDTDASLLEINPFITTKDDKLFALDCKINFDDNAMFR 228 HSP 2 Score: 60.077 bits (144), Expect = 8.519e-42 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVGL 759
++DP V A K +NYI LDG I CMVNGAGLA+ATMDI +Y G+
Sbjct: 240 EEDPLEVEASKYALNYIKLDGNIACMVNGAGLAMATMDIIQYAGGM 285
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_SINMW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sinorhizobium medicae (strain WSM419) GN=sucC PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.110e-41 Identity = 79/192 (41.15%), Postives = 110/192 (57.29%), Query Frame = 3
Query: 27 VVNIQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590
VV QI AGGRG G FK + KGGV + K +EV + +MLG LVTKQTGP GK V+++Y+ + + E+Y +I++DR + ++GG IE +AE P IV V ID G+T +D + + L R DA + LYK F E D +LLE+NPL + ++ DAK++FD NA FR
Sbjct: 44 VVKSQIHAGGRGKGKFKELGADAKGGVRLAKSADEVVAHAREMLGNTLVTKQTGPSGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPDKGVTADDLKTLTEALKLDGEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFR 235 HSP 2 Score: 60.077 bits (144), Expect = 1.110e-41 Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 1
Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744
T++D + + A K D+ Y+ LDG IGCMVNGAGLA+ATMDI K
Sbjct: 246 TEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIK 287
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_RHIME (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhizobium meliloti GN=sucC PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.110e-41 Identity = 80/192 (41.67%), Postives = 109/192 (56.77%), Query Frame = 3
Query: 27 VVNIQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590
VV QI AGGRG G FK KGGV + K +EV + MLG LVTKQTGP GK V+++Y+ + + E+Y +I++DR + ++GG IE +AE P IV V ID G+T E+ + D L + R DA + LYK F E D +LLE+NPL + ++ DAK++FD NA FR
Sbjct: 44 VVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVDEVVANAKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPEKGVTAENLKTLADALKLEGEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFR 235 HSP 2 Score: 60.077 bits (144), Expect = 1.110e-41 Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 1
Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744
T++D + + A K D+ Y+ LDG IGCMVNGAGLA+ATMDI K
Sbjct: 246 TEEDDKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIK 287
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_BRAJA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bradyrhizobium japonicum GN=sucC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.110e-41 Identity = 78/192 (40.62%), Postives = 107/192 (55.73%), Query Frame = 3
Query: 27 VVNIQILAGGRGLGTFK---SGLKGGVHIVKKE-EVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590
VV QI AGGRG G FK +G KGGV I K EV + + +MLG LVT QTGP GK V+++Y+ + + E Y ++++DR+T+ + ++GG +IED+A P IV +D GI V + L A + +LY F D ++LEINPL T QL DAK++FDDNA FR
Sbjct: 44 VVKSQIHAGGRGKGKFKEASAGDKGGVRIAKSAAEVSEFAKQMLGATLVTIQTGPAGKQVNRLYIEDGSDIDKEFYLSLLVDRETSRVSFVVSTEGGVNIEDVAHNTPEKIVTFSVDPATGIMGHHGRTVANALKLSGDLAKQAEKLTAQLYAAFVAKDMSMLEINPLVVTKQGQLRVLDAKVSFDDNALFR 235 HSP 2 Score: 63.5438 bits (153), Expect = 1.110e-41 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVGLLP 765
T++D + + A K D+NY+ LDG IGCMVNGAGLA+ATMDI K + G+ P
Sbjct: 246 TEEDAKEIEASKYDLNYVTLDGNIGCMVNGAGLAMATMDIIK-LYGMAP 293 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |