EY675337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.122e-13 Identity = 42/106 (39.62%), Postives = 56/106 (52.83%), Query Frame = 2 Query: 131 SSGKLNREVALKPVSSSASFKVEAKGEWLPGL---ASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAG 436 ++GK A P SS F + +WL A+P YL G PGD G+D GL+ DPE K Y + EL+++RWAMLG +G PE+ K G W+ AG Sbjct: 17 ATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAG 122
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.264e-13 Identity = 54/155 (34.84%), Postives = 79/155 (50.97%), Query Frame = 2 Query: 59 ATVTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENL------KWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQ-----WYD------AGKAEYFASSSTLF 472 ++++T A AA + S+ +T + + R + PV A+ ++ W S +YL+G LPGD GFDPLGL+ DPE KW E++N R+AMLG G + PE+ K G+I PQ W+ AG Y+A + TLF Sbjct: 10 SSISTSAEAARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQL-----WFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLI--PQETALAWFQTGVIPPAGTYNYWADNYTLF 156
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.271e-13 Identity = 45/104 (43.27%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 212 WLPGLASPTYLNGSLPGDNGFDPLGLAEDPENL------KWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQ-----WYD------AGKAEYFASSSTLF 472 W S +YL+GSLPGD GFDPLGL+ DPE +W E++N R+AMLG VG + PE K+G+I PQ W+ AG Y+A + TLF Sbjct: 58 WFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLI--PQETALAWFQTGVIPPAGTYNYWADNYTLF 158
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.609e-12 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 56 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFRD 478 MA T S+ F A K + +TG+ R+ KPV+SS+ + + ++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ G+A +F + S +F + Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV-------KFGEAVWFKAGSQIFSE 140
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.155e-12 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 56 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFRD 478 MAT T S++ F A K S +TG+ R+ A K P SS + + + ++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ G+A +F + S +F + Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV-------KFGEAVWFKAGSQIFSE 142
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 8.039e-12 Identity = 50/147 (34.01%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 56 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVA--LKPVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLF 472 MA T S++ F A K S +TG+ R+ A KPVSSS+ + + ++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ G+A +F S +F Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV-------KFGEAVWFKGGSQIF 140
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.050e-11 Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 2 Query: 233 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQ--WYDAG 436 P YLNG + GD G+DP GL + PEN Y EL+++RWAMLG G ++PE K G P+ W+ G Sbjct: 82 PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTG 151
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.371e-11 Identity = 45/146 (30.82%), Postives = 73/146 (50.00%), Query Frame = 2 Query: 56 MATVTTQASA----AVFRPCASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLP-GLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFRD 478 MAT T Q SA + +P R + G+ G+++ +K S + + P +P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ K G+ G+A +F + S +F++ Sbjct: 1 MATSTIQQSAFAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGV-------KFGEAVWFKAGSQIFQE 139
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.791e-11 Identity = 50/152 (32.89%), Postives = 80/152 (52.63%), Query Frame = 2 Query: 56 MATVTTQASAAVFRPCASKSRFLTGSSGKL--NREVAL-------KPVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFRD 478 MA TT S+ P A K+ L+ SS ++ N +V + KPVSS + + + ++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ G+A +F + S +F + Sbjct: 1 MAASTTALSS----PFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV-------KFGEAVWFKAGSQIFSE 141
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.791e-11 Identity = 47/148 (31.76%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 56 MATVTTQASAAVFRPCA---SKSRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFRD 478 MA T S++ F A S +TG+ R+ K PVSS + + + ++L + +P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+F + G+ G+A +F + S +F + Sbjct: 1 MAAATMAISSSSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGV-------KFGEAVWFKAGSQIFSE 141 The following BLAST results are available for this feature:
BLAST of EY675337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY675337 ID=EY675337; Name=EY675337; organism=Citrus sinensis; type=EST; length=1017bpback to top |