EY675337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.791e-11 Identity = 50/152 (32.89%), Postives = 80/152 (52.63%), Query Frame = 2 Query: 56 MATVTTQASAAVFRPCASKSRFLTGSSGKL--NREVAL-------KPVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFRD 478 MA TT S+ P A K+ L+ SS ++ N +V + KPVSS + + + ++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ G+A +F + S +F + Sbjct: 1 MAASTTALSS----PFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV-------KFGEAVWFKAGSQIFSE 141
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.791e-11 Identity = 49/147 (33.33%), Postives = 74/147 (50.34%), Query Frame = 2 Query: 56 MATVTTQASAAVF-RPCASKSRFLTGSSGKLNREVALKP---VSSSASFKVEAKGEWLPGLAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFRD 478 MA T S+ V R S S L G + R+ A KP SS + + + +L L+ P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+ G+A +F + S +F + Sbjct: 1 MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV-------KFGEAVWFKAGSQIFSE 140
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.339e-11 Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 2 Query: 203 KGEWLPGLAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVF-TKIGI-INVPQWYDAG 436 + +WL ++ P YL G PGD G+D GL+ DPE K Y + E++++RWA+LG +G+L PE+ T G+ P W+ AG Sbjct: 44 RAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAG 125
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.339e-11 Identity = 46/136 (33.82%), Postives = 70/136 (51.47%), Query Frame = 2 Query: 56 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAG 436 MA T S++ F K S +TG+ R+ A K PVSS + + + ++L + +P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+F + G+ W AG Sbjct: 1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAG 136
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.990e-11 Identity = 50/148 (33.78%), Postives = 75/148 (50.68%), Query Frame = 2 Query: 56 MATVTTQASAAVFRPCASK---SRFLTGSSGKLNREVALKP--VSSSASFKVEAKGEWLPGLAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFRD 478 MA T S++ F A K S L G + R+ A K VSSS+ + + +L L+ P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ G+A +F + S +F D Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV-------KFGEAGWFKAGSQIFSD 141
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.211e-11 Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 56 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFRD 478 MA T S++ F A K S +TG+ R+ K P+SS + + + ++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ G+A +F + S +F + Sbjct: 1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV-------KFGEAVWFKAGSQIFSE 142
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.211e-11 Identity = 46/136 (33.82%), Postives = 70/136 (51.47%), Query Frame = 2 Query: 56 MATVTTQASAAVFRPCA----SKSRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAG 436 MA T S++ F A S S +TG+ R+ K P SSS+ + + ++L + +P+YL G P D G+D GL+ DPE + E+++ RWAMLG +G + PE+F + GI W+ AG Sbjct: 1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAG 136
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.211e-11 Identity = 42/131 (32.06%), Postives = 67/131 (51.15%), Query Frame = 2 Query: 83 AAVFRPCASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPG-----------LASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTK-IGI-INVPQWYDAG 436 AA R +K+ FL+G G+ L+ ++++ + ++ + G +P+YLNG PGD G+D GL+ DPE E+++ RWAMLG +G + PEV K +G+ P W+ AG Sbjct: 7 AAASRAVVAKTPFLSGQ-GRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAG 136
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.211e-11 Identity = 38/112 (33.93%), Postives = 62/112 (55.36%), Query Frame = 2 Query: 149 REVALKPVSSSASFKVEAKGEWLPGLAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFRD 478 R+ A K VSS + + + ++L + P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+ G+A +F + S +F + Sbjct: 16 RKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV-------KFGEASWFKAGSQIFSE 120
BLAST of EY675337 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.211e-11 Identity = 39/121 (32.23%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 122 LTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFRD 478 + G++ R+ A K VSS + + + ++L + P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ ++ G+ G+A +F + S +F + Sbjct: 17 IQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGV-------KFGEAVWFKAGSQIFSE 130 The following BLAST results are available for this feature:
BLAST of EY675337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675337 ID=EY675337; Name=EY675337; organism=Citrus sinensis; type=EST; length=1017bpback to top |