EY675175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_HUMAN (60S ribosomal protein L27a OS=Homo sapiens GN=RPL27A PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.144e-20 Identity = 48/92 (52.17%), Postives = 67/92 (72.83%), Query Frame = 1 Query: 1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267 M+++H RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 58 MKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_PANTR (60S ribosomal protein L27a OS=Pan troglodytes GN=RPL27A PE=2 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 3.330e-20 Identity = 47/90 (52.22%), Postives = 66/90 (73.33%), Query Frame = 1 Query: 1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVL 261 M+++H RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL Sbjct: 58 MKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKSVGGACVL 146
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_MOUSE (60S ribosomal protein L27a OS=Mus musculus GN=Rpl27a PE=2 SV=4) HSP 1 Score: 96.2857 bits (238), Expect = 5.680e-20 Identity = 48/92 (52.17%), Postives = 66/92 (71.74%), Query Frame = 1 Query: 1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267 MR++H RN+ CP VN+DK W++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 58 MRHYHLKRNQSFCPTVNLDKPWTLVSEQTRVNAAKNKTGVAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: R27A2_ENTHI (60S ribosomal protein L27a-2/4 OS=Entamoeba histolytica GN=rpl27a-2 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 7.418e-20 Identity = 48/93 (51.61%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASK----DNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267 MR FH NK++CP +NVD LWS+V ++V+A+ + VP+ID + GYFKVLGKG LP+ QPV+V+A+ S+ A++KIK GGA LTA Sbjct: 58 MRVFHLKANKYYCPSINVDSLWSLVGKDVQAQYKNAKVGEEVPVIDCVKHGYFKVLGKGFLPK-QPVIVRARYFSEKAQQKIKAVGGACELTA 149
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: R27A1_ENTHI (60S ribosomal protein L27a-1 OS=Entamoeba histolytica GN=rpl27a-1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 9.689e-20 Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASK----DNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267 MR FH NK++CP +NVD LWS+V ++++A+ + VP+ID + GYFKVLGKG LP+ QPV+V+A+ S+ A++KIK GGA LTA Sbjct: 58 MRVFHLKANKYYCPSINVDSLWSLVGKDIQAQYKNAKVGEEVPVIDCVKHGYFKVLGKGFLPK-QPVIVRARYFSEKAQQKIKAVGGACELTA 149
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: R27A1_ARATH (Putative 60S ribosomal protein L27a-1 OS=Arabidopsis thaliana GN=RPL27AA PE=5 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 9.689e-20 Identity = 54/92 (58.70%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA*VY 276 MRYFH LRNKF+C IVN+DKLWSMV LGKG LPEN+PVVVKAKLVS T EKKIKEAG AVVLT +Y Sbjct: 39 MRYFHKLRNKFYCQIVNLDKLWSMV--------------------------LGKGFLPENKPVVVKAKLVSNTDEKKIKEAGSAVVLTFLLY 104
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: R27A3_ENTHI (60S ribosomal protein L27a-3 OS=Entamoeba histolytica GN=rpl27a-3 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.158e-19 Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEV----KAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267 MR FH NK++CP +NVD LWS+V ++V K + + VP+ID + GYFKVLGKG LP+ QPV+V+A+ S+ A++KIK GGA LTA Sbjct: 58 MRVFHLKANKYYCPSINVDSLWSLVGKDVQEQYKNAKTGEEVPVIDCVKHGYFKVLGKGFLPK-QPVIVRARYFSEKAQQKIKAVGGACELTA 149
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL28_NEUCR (60S ribosomal protein L28 OS=Neurospora crassa GN=rpl-28 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 6.280e-19 Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAK----ASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267 MR+FH LRN PI+N++KLW++VP E + K A+ + P+ID+ GY K+LGKG LP+ P+VV+A+ VS AE+KIKEAGG + L A Sbjct: 58 MRHFHLLRNHQWAPILNIEKLWTLVPAEAREKYVSGAATETAPVIDLLSHGYAKLLGKGRLPQ-VPIVVRARYVSAEAERKIKEAGGVIELVA 149
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_XENLA (60S ribosomal protein L27a OS=Xenopus laevis GN=rpl27a PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 8.202e-19 Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 1 Query: 1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVK---AKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267 MR++H +N+ CP +N+DKLW++V ++ + AK + P+ID GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 58 MRHYHLKKNQSFCPTINLDKLWTLVSEQTRLNHAKNLEGPAPIIDAVHAGYYKVLGKGKLPK-QPVIVKAKFFSRKAEEKIKSVGGACVLGA 148
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL28_YEAST (60S ribosomal protein L28 OS=Saccharomyces cerevisiae GN=RPL28 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 2.386e-18 Identity = 46/93 (49.46%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAK----ASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267 MRYFH + F P++N+DKLW+++P++ + + ASK+ P+ID GY K+LGKG +P N PV+VKA+ VSK AE+KI+ AGG V L A Sbjct: 58 MRYFHKQQAHFWKPVLNLDKLWTLIPEDKRDQYLKSASKETAPVIDTLAAGYGKILGKGRIP-NVPVIVKARFVSKLAEEKIRAAGGVVELIA 149 The following BLAST results are available for this feature:
BLAST of EY675175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY675175 ID=EY675175; Name=EY675175; organism=Citrus sinensis; type=EST; length=435bpback to top |