EY675175

Overview
NameEY675175
Unique NameEY675175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length435
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: R27A2_ARATH (60S ribosomal protein L27a-2 OS=Arabidopsis thaliana GN=RPL27AB PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 2.076e-38
Identity = 75/89 (84.27%), Postives = 84/89 (94.38%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MRYFH LRNKF CPIVN+DKLWS+VP++VKAK+SKDNVP+IDVTQ G+FKVLGKG LPEN+P VVKAKL+SKTAEKKIKEAGGAVVLTA
Sbjct:   58 MRYFHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: R27A3_ARATH (60S ribosomal protein L27a-3 OS=Arabidopsis thaliana GN=RPL27AC PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 4.625e-38
Identity = 74/89 (83.15%), Postives = 84/89 (94.38%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MRYFH LRNKF CPIVN+DKLWS+VP++VKAK++KDNVP+IDVTQ G+FKVLGKG LPEN+P VVKAKL+SKTAEKKIKEAGGAVVLTA
Sbjct:   58 MRYFHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_TETTH (60S ribosomal protein L27a OS=Tetrahymena thermophila GN=RPL27A PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 6.484e-24
Identity = 56/91 (61.54%), Postives = 68/91 (74.73%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKD--NVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MR FH  +N  HCP+VN+DKLWS+V    + K ++D   VP+IDVT+ G+FKVLGKG LP NQPVVVKAK  SKTAE++I   GGA VLTA
Sbjct:   60 MRTFHLKKNPLHCPVVNIDKLWSLVSDATRQKYAEDKKKVPVIDVTKAGFFKVLGKGRLP-NQPVVVKAKYFSKTAERRIVAVGGACVLTA 149          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_OSCBR (60S ribosomal protein L27a OS=Oscheius brevesophaga GN=rpl-27a PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.218e-23
Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MR FH  +N  +CP VNVD+LW++VP+E K K S +  P+ID  + GYFKVLGKG+LP+ QP++VKAK  S  AE KIK AGGA +L A
Sbjct:   58 MRVFHLNKNHHYCPTVNVDRLWALVPEEQKTKVSAEKAPVIDCVKAGYFKVLGKGLLPK-QPLIVKAKFFSHEAENKIKAAGGACILVA 145          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_DICDI (60S ribosomal protein L27a OS=Dictyostelium discoideum GN=rpl27a PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.218e-23
Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MR+FH LRN++HCP V+++K+W++VP+ V+   +  N    P++DVTQ G+FKVLG G+LP  QP++VKA+  SK AEKKIK  GGA +L A
Sbjct:   58 MRHFHLLRNQYHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLGHGILP-TQPIIVKARYFSKVAEKKIKAVGGACILVA 148          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_EUPCR (60S ribosomal protein L27a OS=Euplotes crassus GN=RPL27A PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.223e-22
Identity = 52/91 (57.14%), Postives = 70/91 (76.92%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQE--VKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MR+FH +RN+++CP +N+ KLWS+V +E   KA+  K  V +IDV + GY+KVLGKG+LPE  P+VVKAKL + TAEK+IK+ GGA VL A
Sbjct:   58 MRHFHLMRNQYYCPSINLSKLWSLVTEEERQKAQTDKSKVILIDVVKHGYYKVLGKGLLPE-VPLVVKAKLFTPTAEKRIKQVGGACVLRA 147          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_RAT (60S ribosomal protein L27a OS=Rattus norvegicus GN=Rpl27a PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 8.763e-21
Identity = 49/92 (53.26%), Postives = 67/92 (72.83%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MR++H  RN+  CP VN+DKLW++V ++ +  A+K+     P+IDV + GY+KVLGKG LP+ QPV+VKAK  S+ AE+KIK  GGA VL A
Sbjct:   58 MRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_MACFA (60S ribosomal protein L27a OS=Macaca fascicularis GN=RPL27A PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.763e-21
Identity = 49/92 (53.26%), Postives = 67/92 (72.83%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MR++H  RN+  CP VN+DKLW++V ++ +  A+K+     P+IDV + GY+KVLGKG LP+ QPV+VKAK  S+ AE+KIK  GGA VL A
Sbjct:   58 MRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_BOVIN (60S ribosomal protein L27a OS=Bos taurus GN=RPL27A PE=2 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 8.763e-21
Identity = 49/92 (53.26%), Postives = 67/92 (72.83%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MR++H  RN+  CP VN+DKLW++V ++ +  A+K+     P+IDV + GY+KVLGKG LP+ QPV+VKAK  S+ AE+KIK  GGA VL A
Sbjct:   58 MRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_PONAB (60S ribosomal protein L27a OS=Pongo abelii GN=RPL27A PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 1.144e-20
Identity = 48/92 (52.17%), Postives = 67/92 (72.83%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            M+++H  RN+  CP VN+DKLW++V ++ +  A+K+     P+IDV + GY+KVLGKG LP+ QPV+VKAK  S+ AE+KIK  GGA VL A
Sbjct:   58 MKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKSVGGACVLVA 148          
The following BLAST results are available for this feature:
BLAST of EY675175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
R27A2_ARATH2.076e-3884.2760S ribosomal protein L27a-2 OS=Arabidopsis thalia... [more]
R27A3_ARATH4.625e-3883.1560S ribosomal protein L27a-3 OS=Arabidopsis thalia... [more]
RL27A_TETTH6.484e-2461.5460S ribosomal protein L27a OS=Tetrahymena thermoph... [more]
RL27A_OSCBR3.218e-2357.3060S ribosomal protein L27a OS=Oscheius brevesophag... [more]
RL27A_DICDI3.218e-2353.2660S ribosomal protein L27a OS=Dictyostelium discoi... [more]
RL27A_EUPCR1.223e-2257.1460S ribosomal protein L27a OS=Euplotes crassus GN=... [more]
RL27A_RAT8.763e-2153.2660S ribosomal protein L27a OS=Rattus norvegicus GN... [more]
RL27A_MACFA8.763e-2153.2660S ribosomal protein L27a OS=Macaca fascicularis ... [more]
RL27A_BOVIN8.763e-2153.2660S ribosomal protein L27a OS=Bos taurus GN=RPL27A... [more]
RL27A_PONAB1.144e-2052.1760S ribosomal protein L27a OS=Pongo abelii GN=RPL2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-007-B06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675175 ID=EY675175; Name=EY675175; organism=Citrus sinensis; type=EST; length=435bp
ATGAGGTACTTCCACACACTGCGTAATAAATTTCATTGCCCAATTGTGAA
CGTCGACAAGCTTTGGTCGATGGTACCTCAGGAGGTCAAAGCCAAGGCTT
CCAAAGACAATGTGCCAATGATCGATGTGACTCAGTTTGGCTACTTTAAG
GTTTTGGGTAAGGGCGTTTTGCCTGAGAACCAACCCGTTGTGGTGAAGGC
CAAGCTTGTTTCCAAGACAGCCGAGAAGAAAATTAAAGAAGCTGGTGGAG
CTGTTGTGCTTACTGCTTAGGTTTACTGTTATTGTTTTTAGAAAATTTTT
GTGATATTTTGGATTTCAGTTTTTGAATATTTGACTATTTTTACATGTAG
TTTTGGATGTTTATGTTATCATTTGAAACTTTTTGCTTTATATTGAGACC
TGTTATTGATTAAAAAAAAAAAAAAAAAAAAAAAA
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