EY675175

Overview
NameEY675175
Unique NameEY675175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length435
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_ERYGR (60S ribosomal protein L27a OS=Erysiphe graminis subsp. hordei PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.446e-17
Identity = 45/93 (48.39%), Postives = 63/93 (67.74%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVK----AKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MRYFH   N F  P++N++KLWS++P E +    +  + D +P+ID+   GY KVLGKG +P+  P+VV+A+  SK AE+KI EAGG V L A
Sbjct:   58 MRYFHKQGNHFWKPVLNLEKLWSLIPAEKREAYLSSTNPDVIPVIDLLPLGYSKVLGKGRIPK-VPLVVRARWFSKEAERKITEAGGVVELVA 149          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL28B_SCHPO (60S ribosomal protein L28-B OS=Schizosaccharomyces pombe GN=rpl28b PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.677e-17
Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MR FH ++N    P VN+D+LW++VP E + K    N    P+I+V Q GY KVLGKG LP+  PV+++ + VS+ AE+KIK+AGG V L A
Sbjct:   58 MRRFHLMKNPLWRPTVNLDRLWTLVPNETREKYLGKNTEVAPVINVLQSGYGKVLGKGRLPDT-PVIIQTRYVSRRAEEKIKQAGGVVELIA 148          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL28A_SCHPO (60S ribosomal protein L28-A OS=Schizosaccharomyces pombe GN=rpl28a PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 7.677e-17
Identity = 46/92 (50.00%), Postives = 62/92 (67.39%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MR FH ++N    P VN+D+LW+++P E + K    N    P+I+V Q GY KVLGKG LPE  PV+V+ + VS+ AE+KIK+AGG V L A
Sbjct:   58 MRRFHLMKNPLWRPTVNLDRLWTLLPNEARDKYLGKNTEVAPVINVLQSGYGKVLGKGRLPET-PVIVQTRYVSRRAEEKIKQAGGVVELIA 148          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_DROME (60S ribosomal protein L27a OS=Drosophila melanogaster GN=RpL27A PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.710e-16
Identity = 46/92 (50.00%), Postives = 62/92 (67.39%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MR FH  R     P +N+DKLWS+V  E  A+  K+     P+ID+ +FGY+K+LG+G LP  +PV+VKAK  SK AE KIK+AGG  +L+A
Sbjct:   59 MRNFHLRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPA-RPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_TRYBB (60S ribosomal protein L27a OS=Trypanosoma brucei brucei GN=RPL27A PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.338e-12
Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKASKDNV-PMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            M ++H  +N    P +N+D L  ++ ++   KA K  V P+ID+   GY K+LG G L    P +VKA+ VSK A+KKI++AGGAVVL A
Sbjct:   58 MNHYHKKKNTTWKPTINLDNLTKLMAKDEAMKAKKGEVLPVIDLLANGYSKLLGNGHL--QAPCIVKARWVSKLADKKIRKAGGAVVLQA 145          
BLAST of EY675175 vs. ExPASy Swiss-Prot
Match: RL27A_TENMO (60S ribosomal protein L27a OS=Tenebrio molitor GN=RpL27A PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.295e-11
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 1
Query:    1 MRYFHTLRNKFHCPIVNVDKLWSMVPQEVKAKAS---KDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 267
            MR +H  RN    P +N+DKLW++V ++ ++K     +   P+ID+ + GY+K+LGKG    N   ++K        E KIK  GGA VL+A
Sbjct:   58 MRNYHLRRNSKWAPAINLDKLWTLVSEQTRSKYQNHPEGKAPVIDIVKAGYYKLLGKGACLTNLS-LLKPSFSLNRLEDKIKAVGGACVLSA 148          
The following BLAST results are available for this feature:
BLAST of EY675175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
RL27A_ERYGR3.446e-1748.3960S ribosomal protein L27a OS=Erysiphe graminis su... [more]
RL28B_SCHPO7.677e-1748.9160S ribosomal protein L28-B OS=Schizosaccharomyces... [more]
RL28A_SCHPO7.677e-1750.0060S ribosomal protein L28-A OS=Schizosaccharomyces... [more]
RL27A_DROME1.710e-1650.0060S ribosomal protein L27a OS=Drosophila melanogas... [more]
RL27A_TRYBB3.338e-1244.4460S ribosomal protein L27a OS=Trypanosoma brucei b... [more]
RL27A_TENMO6.295e-1138.0460S ribosomal protein L27a OS=Tenebrio molitor GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-007-B06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675175 ID=EY675175; Name=EY675175; organism=Citrus sinensis; type=EST; length=435bp
ATGAGGTACTTCCACACACTGCGTAATAAATTTCATTGCCCAATTGTGAA
CGTCGACAAGCTTTGGTCGATGGTACCTCAGGAGGTCAAAGCCAAGGCTT
CCAAAGACAATGTGCCAATGATCGATGTGACTCAGTTTGGCTACTTTAAG
GTTTTGGGTAAGGGCGTTTTGCCTGAGAACCAACCCGTTGTGGTGAAGGC
CAAGCTTGTTTCCAAGACAGCCGAGAAGAAAATTAAAGAAGCTGGTGGAG
CTGTTGTGCTTACTGCTTAGGTTTACTGTTATTGTTTTTAGAAAATTTTT
GTGATATTTTGGATTTCAGTTTTTGAATATTTGACTATTTTTACATGTAG
TTTTGGATGTTTATGTTATCATTTGAAACTTTTTGCTTTATATTGAGACC
TGTTATTGATTAAAAAAAAAAAAAAAAAAAAAAAA
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