EY702704

Overview
NameEY702704
Unique NameEY702704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y5079_MYCMM (Uncharacterized tRNA/rRNA methyltransferase MMAR_5079 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_5079 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 56/171 (32.75%), Postives = 86/171 (50.29%), Query Frame = 1
Query:   10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522
            P+L VALD ++DP+NLG I+RS   FG  GV++  + SA ++ V  + SAG+   + +    N+ + L   A+ G RV+G         ++++    P ++V+GSEG GL  LV ++C  +V +P   P                             ESLN SVAAGV+L
Sbjct:  160 PALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARMPVARATNLTRALKDWADRGVRVVGLDAGGDTA-IDDLDGSDPIVVVVGSEGKGLSRLVRQTCDEVVSVPMAGP----------------------------TESLNASVAAGVVL 301          
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y4822_MYCSK (Uncharacterized tRNA/rRNA methyltransferase Mkms_4822 OS=Mycobacterium sp. (strain KMS) GN=Mkms_4822 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 59/171 (34.50%), Postives = 86/171 (50.29%), Query Frame = 1
Query:   10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522
            P+L VALD ++DP+NLG I+RS   FG  GV++  + SA ++ V  + SAG+   + +    N+ + L S A+ G +V+G         L+E+    P ++V+GSEG GL  LV  +C  +V IP   P                             ESLN SVAAGV+L
Sbjct:  164 PALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARLPVARATNLNRTLKSWADGGLQVVGLDADGDTT-LDELDGTGPVVVVVGSEGKGLSRLVRENCDAVVSIPMAGP----------------------------TESLNASVAAGVVL 305          
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y4736_MYCSS (Uncharacterized tRNA/rRNA methyltransferase Mmcs_4736 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_4736 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 59/171 (34.50%), Postives = 86/171 (50.29%), Query Frame = 1
Query:   10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522
            P+L VALD ++DP+NLG I+RS   FG  GV++  + SA ++ V  + SAG+   + +    N+ + L S A+ G +V+G         L+E+    P ++V+GSEG GL  LV  +C  +V IP   P                             ESLN SVAAGV+L
Sbjct:  164 PALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARLPVARATNLNRTLKSWADGGLQVVGLDADGDTT-LDELDGTGPVVVVVGSEGKGLSRLVRENCDAVVSIPMAGP----------------------------TESLNASVAAGVVL 305          
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y4155_MYCUA (Uncharacterized tRNA/rRNA methyltransferase MUL_4155 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_4155 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 56/171 (32.75%), Postives = 86/171 (50.29%), Query Frame = 1
Query:   10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522
            P+L VALD ++DP+NLG I+RS   FG  GV++  + SA ++ V  + SAG+   + +    N+ + L   A+ G RV+G         ++++    P ++V+GSEG GL  LV ++C  +V +P   P                             ESLN SVAAGV+L
Sbjct:  160 PALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARMPVARATNLTRALKDWADRGVRVVGLDAGGDTA-IDDLDGSDPIVVVVGSEGKGLSRLVRQTCDEVVSVPMAGP----------------------------TESLNASVAAGVVL 301          
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y955_SYNY3 (Uncharacterized tRNA/rRNA methyltransferase slr0955 OS=Synechocystis sp. (strain PCC 6803) GN=slr0955 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.545e-16
Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = 1
Query:   22 VALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 384
            + +D +TDP NLG IIR+A  FGA G+VL  +  A ++  V K +AG+LE   +    N+ + L +  E+G+ +  G+V+ K   L++    +P  LV+GSEG GL  L ++ C HL+ IP
Sbjct:  220 IIIDSITDPHNLGAIIRTAEAFGAQGMVLPQRRVAGITSTVMKVAAGALEHFPVARVVNLSRALETLKESGFWIY-GTVAGKQTALHQADLREPMGLVIGSEGEGLSLLTQKHCDHLITIP 339          
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y3644_MYCBP (Uncharacterized tRNA/rRNA methyltransferase BCG_3644c OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=BCG_3644c PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.341e-16
Identity = 58/171 (33.92%), Postives = 86/171 (50.29%), Query Frame = 1
Query:   10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522
            P+L VALD ++DP+NLG I+RS   FG  GV++  + SA ++ V  + SAG+   + +    N+ + L   A+ G RV+G         L+++      ++V+GSEG GL  LV ++C  +V IP                       A Q       ESLN SVAAGV+L
Sbjct:  159 PALLVALDNLSDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRTLKGWADRGVRVIGLDAGG-GTALDDVDGTDSLVVVVGSEGKGLSRLVRQNCDEVVSIP----------------------MAAQ------AESLNASVAAGVVL 300          
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y3618_MYCTA (Uncharacterized tRNA/rRNA methyltransferase MRA_3618 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_3618 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.341e-16
Identity = 58/171 (33.92%), Postives = 86/171 (50.29%), Query Frame = 1
Query:   10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522
            P+L VALD ++DP+NLG I+RS   FG  GV++  + SA ++ V  + SAG+   + +    N+ + L   A+ G RV+G         L+++      ++V+GSEG GL  LV ++C  +V IP                       A Q       ESLN SVAAGV+L
Sbjct:  159 PALLVALDNLSDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRTLKGWADRGVRVIGLDAGG-GTALDDVDGTDSLVVVVGSEGKGLSRLVRQNCDEVVSIP----------------------MAAQ------AESLNASVAAGVVL 300          
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y3579_MYCTU (Uncharacterized tRNA/rRNA methyltransferase Rv3579c/MT3685 OS=Mycobacterium tuberculosis GN=Rv3579c PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.341e-16
Identity = 58/171 (33.92%), Postives = 86/171 (50.29%), Query Frame = 1
Query:   10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522
            P+L VALD ++DP+NLG I+RS   FG  GV++  + SA ++ V  + SAG+   + +    N+ + L   A+ G RV+G         L+++      ++V+GSEG GL  LV ++C  +V IP                       A Q       ESLN SVAAGV+L
Sbjct:  159 PALLVALDNLSDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRTLKGWADRGVRVIGLDAGG-GTALDDVDGTDSLVVVVGSEGKGLSRLVRQNCDEVVSIP----------------------MAAQ------AESLNASVAAGVVL 300          
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y324_MYCLE (Uncharacterized tRNA/rRNA methyltransferase ML0324 OS=Mycobacterium leprae GN=ML0324 PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.341e-16
Identity = 58/171 (33.92%), Postives = 85/171 (49.71%), Query Frame = 1
Query:   10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522
            P+L VALD ++DP+NLG I+RS   F   G+++  + SA ++ V  + SAG+   + +    N+ + L   A+ G RV+G         L+++    P  +V+GSEG GL  LV  SC  +V IP        AG+                     VESLN SVA GV+L
Sbjct:  159 PALLVALDNISDPRNLGAIVRSVAAFSGHGILIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRALKVWADQGLRVIGLDHDGDTA-LDDLDGTDPLAVVVGSEGKGLSRLVRHSCDEVVSIP-------MAGQ---------------------VESLNASVAVGVVL 300          
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y324_MYCLB (Uncharacterized tRNA/rRNA methyltransferase MLBr00324 OS=Mycobacterium leprae (strain Br4923) GN=MLBr00324 PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.341e-16
Identity = 58/171 (33.92%), Postives = 85/171 (49.71%), Query Frame = 1
Query:   10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522
            P+L VALD ++DP+NLG I+RS   F   G+++  + SA ++ V  + SAG+   + +    N+ + L   A+ G RV+G         L+++    P  +V+GSEG GL  LV  SC  +V IP        AG+                     VESLN SVA GV+L
Sbjct:  159 PALLVALDNISDPRNLGAIVRSVAAFSGHGILIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRALKVWADQGLRVIGLDHDGDTA-LDDLDGTDPLAVVVGSEGKGLSRLVRHSCDEVVSIP-------MAGQ---------------------VESLNASVAVGVVL 300          
The following BLAST results are available for this feature:
BLAST of EY702704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
Y5079_MYCMM6.697e-1732.75Uncharacterized tRNA/rRNA methyltransferase MMAR_5... [more]
Y4822_MYCSK6.697e-1734.50Uncharacterized tRNA/rRNA methyltransferase Mkms_4... [more]
Y4736_MYCSS6.697e-1734.50Uncharacterized tRNA/rRNA methyltransferase Mmcs_4... [more]
Y4155_MYCUA6.697e-1732.75Uncharacterized tRNA/rRNA methyltransferase MUL_41... [more]
Y955_SYNY32.545e-1638.84Uncharacterized tRNA/rRNA methyltransferase slr095... [more]
Y3644_MYCBP4.341e-1633.92Uncharacterized tRNA/rRNA methyltransferase BCG_36... [more]
Y3618_MYCTA4.341e-1633.92Uncharacterized tRNA/rRNA methyltransferase MRA_36... [more]
Y3579_MYCTU4.341e-1633.92Uncharacterized tRNA/rRNA methyltransferase Rv3579... [more]
Y324_MYCLE4.341e-1633.92Uncharacterized tRNA/rRNA methyltransferase ML0324... [more]
Y324_MYCLB4.341e-1633.92Uncharacterized tRNA/rRNA methyltransferase MLBr00... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-C09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702704 ID=EY702704; Name=EY702704; organism=Citrus sinensis; type=EST; length=876bp
TGAAGATTCCCCTCTCTTTGGGTAGCACTGGATGAGGTGACAGATCCTCA
AAATTTGGGGGTCATCATTAGGTCTGCTTACTTCTTTGGAGCTTCAGGGG
TGGTTTTGTGTGCAAAAAATTCAGCACCATTGAGTGGTGTTGTGAGCAAG
GCTAGTGCAGGGTCACTTGAATTGGTGGAGCTGAGGTACTGTAACAATAT
GATGCAGTTCTTGGTATCATCAGCTGAAAATGGCTGGCGAGTCCTTGGCG
GTTCAGTTTCTTCAAAAGCAGTTCCCTTGAATGAGATTCCTCCTGGTCAG
CCAACTATTCTAGTTTTGGGCAGTGAGGGCACAGGATTGAGGCCTTTGGT
GGAGAGATCATGTACACATTTGGTTAGGATCCCTGGAAACATTCCAGTTG
ATGTAACTGCTGGAGAAATTGATGATGTGGATGCTAATGGAAATCATGGG
TCAGCAGAACAGTTCCAGTCATTTATGGCTGTGGAGAGCTTGAATGTCAG
TGTTGCTGCTGGTGTGCTGCTTCACCACTTAGTTGGGCACCAGGTCAGTA
ATAACAGCCACATAGAGGATAGTTCGACTGCAACAGTTGATTAAGCAGGG
TGAGCGGGGAAGAAAAGAATCACATTTTGTGGTTCATGCTGCTGGATGCA
AAAATTGGGCAGGGTCTAAAATGATTCACTGAGCTTTTGCAAATTGCGAC
GAAACAGGAGCTACATTCCTCAGGAAATGGCTAAGTCGTTTATTGAAAAC
GCAAGGAGAGCCCGGTTGGGACAACTTGGCAGTATGTCTCAAAGTTTTCA
CAGGCTGAAGGAAGCCCATTTCTTCAAACCTTCCCAAATCTTGGGGAAGG
GAAACAGTTGCTTCCTAAATTAATTC
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