EY702704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: MRM1_DICDI (Mitochondrial rRNA methyltransferase OS=Dictyostelium discoideum GN=mrm1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.296e-25 Identity = 67/178 (37.64%), Postives = 99/178 (55.62%), Query Frame = 1 Query: 16 LWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSV-----SSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHLV 534 LW+ LDE+ DPQN+G IIR+ FF GVV+ KNS+P++ SK+S+G+ E + ++ FL SS NGW V+G S+ + + +N+I QPTIL+LG+EG GL+P V C ++I G GN+ ++SLNVSV +G+L+H L+ Sbjct: 374 LWLVLDELWDPQNVGAIIRNCSFFNIDGVVISNKNSSPITPAASKSSSGACESFVINRTESIEGFLKSSQRNGWNVVGTSLDDLNENQPCLDINQIKLDQPTILILGNEGFGLKPSVLEICNKTIKIVG-----------------GNY----------KIDSLNVSVTSGILIHTLL 524
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: MRM1_SCHPO (rRNA methyltransferase, mitochondrial OS=Schizosaccharomyces pombe GN=mrm1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.488e-24 Identity = 75/187 (40.11%), Postives = 101/187 (54.01%), Query Frame = 1 Query: 7 FPSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIP-----------PGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHLV 534 +P L+V +D +TDPQN+G +IRSAY GA G++L K++ LS VVSKASAG+LE+ + + N M FL +S GW+V+G + A+P N+ +P ILVLGSE GLR + C+H V IPG V+SLNVSVAAG+LL+ LV Sbjct: 145 YPPLYVYVDGITDPQNMGAVIRSAYILGAKGILLSKKHNTFLSPVVSKASAGALEVFNISHVKNPMVFLRNSVLKGWKVIG---TKPALPDNKDQIYTPHKIKTELMNEPKILVLGSE-KGLRTNILTQCSHYVSIPGGDKY---------------------------VDSLNVSVAAGILLYSLV 300
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: MRM1_HUMAN (rRNA methyltransferase 1, mitochondrial OS=Homo sapiens GN=MRM1 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.393e-22 Identity = 67/182 (36.81%), Postives = 101/182 (55.49%), Query Frame = 1 Query: 16 LWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLG--GSVSSKAVPLNEIPP--------GQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHL 531 LW+ LD + DP+N G ++RSA+F G V+ +NS PL+ VVSK+SAG++E++++ +++ FL + A+ GW V G G S++ +EIP +PT+LVLG+EG+GL V+ SC L+ I + Q +ESLNVSVAAG+LLH + Sbjct: 146 LWLVLDGIQDPRNFGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKSSAGAMEVMDVFSTDDLTGFLQTKAQQGWLVAGTVGCPSTEDPQSSEIPIMSCLEFLWERPTLLVLGNEGSGLSQEVQASCQLLLTI------------------------LPRRQLPPGLESLNVSVAAGILLHSI 303
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: MRM1_MOUSE (rRNA methyltransferase 1, mitochondrial OS=Mus musculus GN=Mrm1 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 7.644e-21 Identity = 70/185 (37.84%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 16 LWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGG--------SVSSKAVPLN---EIPPGQPTILVLGSEGTGLRPLVERSCTHLVRI--PGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHL 531 LW+ L+ + DP+NLG ++RSA+F G V+ +NS PL+ VVSKASAG++E++++ ++ FL + A+ GW V+G S SSK VP+ E +PT+LVLGSEG+GL V SC L+ I ++P +ESLNVSVA G+LLH + Sbjct: 144 LWLVLEGLQDPRNLGAVMRSAHFLGVDRVITSQRNSCPLTPVVSKASAGAMEVMDVFATPDLPGFLQAKAQQGWLVVGTVGCPGPEISQSSK-VPITSCLEFVWDRPTLLVLGSEGSGLSQEVFASCQLLLTILPRRHLP--------------------------PGLESLNVSVATGILLHSI 301
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y479_MYCPA (Uncharacterized tRNA/rRNA methyltransferase MAP_0479 OS=Mycobacterium paratuberculosis GN=MAP_0479 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18 Identity = 59/171 (34.50%), Postives = 89/171 (52.05%), Query Frame = 1 Query: 10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522 P+L VALD ++DP+NLG I+RS FG GV++ + SA ++ V + SAG+ + + N+ + L A+ G RV+G + L+++ P ++V+GSEG GL LV ++C +V IP AG + ESLN SVAAGV+L Sbjct: 159 PALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRTLQDWADRGLRVIGLDAGGDTM-LDDLDGSDPLVVVVGSEGKGLSRLVRQNCDEVVSIP-------MAG---------------------SAESLNASVAAGVVL 300
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y574_MYCA1 (Uncharacterized tRNA/rRNA methyltransferase MAV_0574 OS=Mycobacterium avium (strain 104) GN=MAV_0574 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.911e-18 Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 1 Query: 10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522 P+L VALD ++DP+NLG I+RS FG GV++ + SA ++ V + SAG+ + + N+ + L A+ G RV+G L+++ P ++V+GSEG GL LV ++C +V IP AG + ESLN SVAAGV+L Sbjct: 159 PALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRTLQDWADRGLRVIGLDAGGDTT-LDDLDGSDPLVVVVGSEGKGLSRLVRQNCDEVVSIP-------MAG---------------------SAESLNASVAAGVVL 300
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y1447_MYCGI (Uncharacterized tRNA/rRNA methyltransferase Mflv_1447 OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_1447 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.033e-17 Identity = 62/171 (36.26%), Postives = 85/171 (49.71%), Query Frame = 1 Query: 10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522 P+L VALD ++DP+NLG I+RS FG GVVL + SA ++ V + SAG+ + N+ + L A+ G +V+G ++EI PTI+V+GSEG GL LV +C +V IP P ESLN SVAAGV+L Sbjct: 163 PALLVALDNISDPRNLGAIVRSVAAFGGHGVVLPQRRSASVTAVAWRTSAGAAARTPVARATNLNRTLKQYADAGLQVVGLDAGGDTT-IDEIDGLTPTIVVVGSEGKGLSRLVRENCDRIVSIPMAGP----------------------------TESLNASVAAGVVL 304
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: MRM1_YEAST (rRNA methyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=MRM1 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.762e-17 Identity = 66/190 (34.74%), Postives = 97/190 (51.05%), Query Frame = 1 Query: 4 RFPSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAE-NGWRV----LGGSVSSKAV--------PLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHLV 534 +FP L + LDE+TDP N+G IIRSAYF G +V+ +N +PL+ VVSK S+G+LEL+ + Y + ++F S E GW L + S K LN + P +LV+G+E G+R ++ V IP G I+ GN V+SLNVSVA +L+ +++ Sbjct: 239 KFP-LGLYLDEITDPHNIGAIIRSAYFLGVDFIVMSRRNCSPLTPVVSKTSSGALELLPIFYVDKPLEFFTKSQEMGGWTFITSHLANATSEKYTVGKTISMHDLNGLCNELPVVLVVGNESQGVRTNLKMRSDFFVEIP--------FGGIE----KGNRAPEP------IVDSLNVSVATALLIDNIL 409
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y6073_MYCS2 (Uncharacterized tRNA/rRNA methyltransferase MSMEG_6073 OS=Mycobacterium smegmatis GN=MSMEG_6073 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17 Identity = 60/171 (35.09%), Postives = 85/171 (49.71%), Query Frame = 1 Query: 10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522 P+L VALD ++DP+NLG I+RS F GVV+ + SA ++ V + SAG+ V + N+ + L S A+ G +++G L+E+ PT++V+GSEG GL LV C +V IP P ESLN SVAAGV+L Sbjct: 164 PALLVALDNISDPRNLGAIVRSVAAFAGHGVVIPQRRSASVTAVAWRTSAGAAARVPVARATNLNRTLKSFADAGLQIVGLDAGGDTT-LDELDATGPTVVVVGSEGKGLSRLVREHCDAIVSIPMAGP----------------------------TESLNASVAAGVVL 305
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: Y5122_MYCSJ (Uncharacterized tRNA/rRNA methyltransferase Mjls_5122 OS=Mycobacterium sp. (strain JLS) GN=Mjls_5122 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17 Identity = 59/171 (34.50%), Postives = 86/171 (50.29%), Query Frame = 1 Query: 10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522 P+L VALD ++DP+NLG I+RS FG GV++ + SA ++ V + SAG+ + + N+ + L S A+ G +V+G L+E+ P ++V+GSEG GL LV +C +V IP P ESLN SVAAGV+L Sbjct: 164 PALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARLPVARATNLNRTLKSWADGGLQVVGLDADGDTT-LDELDGTGPVVVVVGSEGKGLSRLVRENCDAVVSIPMAGP----------------------------TESLNASVAAGVVL 305 The following BLAST results are available for this feature:
BLAST of EY702704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702704 ID=EY702704; Name=EY702704; organism=Citrus sinensis; type=EST; length=876bpback to top |