EY702704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: RLMB_VIBCH (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Vibrio cholerae GN=rlmB PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.492e-13 Identity = 57/180 (31.67%), Postives = 84/180 (46.67%), Query Frame = 1 Query: 16 LWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENG-WRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHLVGHQVSN 552 L + LD VTDP NLG +R+A G + V++ SAPL+ VSK + G+ E V L N+ + + + E G W V G+ + + +V+G+EG G+R L +C L++IP AG +V SLNVSVA GV L V +++N Sbjct: 97 LLLVLDGVTDPHNLGACLRNADAAGVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFV--GTAGEATHDIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIP-------MAG---------------------SVSSLNVSVACGVCLFEAVRQRMAN 246
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: TRMHL_STAS1 (Putative trmH family tRNA/rRNA methyltransferase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP2224 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.001e-12 Identity = 38/119 (31.93%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 28 LDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 384 LD + DP NLG I+R+A G GV++ + S L+ V+KAS G+++ + + N+ + + +NG+ ++ G+ + + E+ G P +V+GSEG G+ LV+ C + IP Sbjct: 100 LDGLEDPHNLGSILRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHIPVMRVTNLANTIETLKDNGYWIV-GTEAENSTDYREMDAGMPLGIVIGSEGQGMSRLVKEKCDFYINIP 217
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: RLMB_VIBVY (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Vibrio vulnificus (strain YJ016) GN=rlmB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.229e-12 Identity = 55/180 (30.56%), Postives = 84/180 (46.67%), Query Frame = 1 Query: 16 LWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENG-WRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHLVGHQVSN 552 L + LD VTDP NLG +R+A G + V++ SAP++ VSK + G+ E V L N+ + + E G W V G+ + + +V+G+EG G+R L +C L++IP AG AV SLNVSVA+G+ L V ++++ Sbjct: 97 LLLILDGVTDPHNLGACLRNADAAGVAAVIVPKDKSAPMTATVSKVACGAAETVPLVRVTNLARTMRHLQEQGIWIV--GTAGEATHDIYQAKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIP-------MAG---------------------AVSSLNVSVASGICLFEAVRQRLAS 246
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: RLMB_VIBVU (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Vibrio vulnificus GN=rlmB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.229e-12 Identity = 55/180 (30.56%), Postives = 84/180 (46.67%), Query Frame = 1 Query: 16 LWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENG-WRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHLVGHQVSN 552 L + LD VTDP NLG +R+A G + V++ SAP++ VSK + G+ E V L N+ + + E G W V G+ + + +V+G+EG G+R L +C L++IP AG AV SLNVSVA+G+ L V ++++ Sbjct: 97 LLLILDGVTDPHNLGACLRNADAAGVAAVIVPKDKSAPMTATVSKVACGAAETVPLVRVTNLARTMRHLQEQGIWIV--GTAGEATHDIYQAKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIP-------MAG---------------------AVSSLNVSVASGICLFEAVRQRLAS 246
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: RLMB_COXBU (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Coxiella burnetii GN=rlmB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.803e-12 Identity = 54/174 (31.03%), Postives = 81/174 (46.55%), Query Frame = 1 Query: 10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHL 531 P+L + LD V DP NLG +RSA FG V+ + ++ VV K + G+ E+ N+ + + + G ++G +V ++ + + EI +VLGSEG GLR L + C L +IP GS VESLNVSVA G+ L+ + Sbjct: 96 PALLLILDGVKDPHNLGACLRSANAFGVRAVIAPKDRAVGVTPVVRKVACGAAEMTPFIRVTNLSRTIDWLQKEGVWIVGTAVEAETL-IQEIDLTGDIAIVLGSEGAGLRRLTKERCDFLAQIP-------------------LRGS---------VESLNVSVACGICLYEV 240
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: RLMB_NEIMB (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Neisseria meningitidis serogroup B GN=rlmB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.486e-12 Identity = 55/185 (29.73%), Postives = 79/185 (42.70%), Query Frame = 1 Query: 10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHLVGHQVSNNSHI 564 P L + LD +TDP NLG +R+A G V+ SA L+ VSK + G+ E V N+ + L E G ++G +S ++ L V+G+EG G+R L C LV IP F VES+NVSV+AG++L +V N + Sbjct: 95 PPLLLILDGITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVACGAAETVPYITVTNLARTLRELKEYGIWIIGTDMSGES-DLYHCNLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP----------------------------MFGTVESMNVSVSAGMVLSETRRQRVLKNEKV 250
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: RLMB_CHRVO (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Chromobacterium violaceum GN=rlmB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.486e-12 Identity = 55/172 (31.98%), Postives = 74/172 (43.02%), Query Frame = 1 Query: 10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENG-WRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLL 522 P L + LD VTDP NLG +R A GA V+ SA L+ VSK + G+ E+V N+ + L + G W + G+ L P V+G+EG G+R L C LV IP F VESLNVSV++G++L Sbjct: 95 PPLLLILDGVTDPHNLGACLRVADAMGAHAVIAPKDRSATLNATVSKVACGAAEVVPYITVTNLARTLRDLKDAGVW--IAGTTMEADTDLYHFDASGPLAWVMGAEGEGMRRLTREHCDVLVSIP----------------------------MFGTVESLNVSVSSGMVL 236
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: RLMB_SHEON (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Shewanella oneidensis GN=rlmB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12 Identity = 57/170 (33.53%), Postives = 75/170 (44.12%), Query Frame = 1 Query: 28 LDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENG-WRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHLV 534 LD VTDP NLG +R+A G G+++ NS L+ VVSK + G+ E V L N+ + + E G W V G+ L + P + +G+EG GLR L C LV IP + GS V SLNVSVA G+ L V Sbjct: 102 LDGVTDPHNLGACLRNADAAGVQGIIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIV--GTAGEADCELYQADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMS-------------------GS---------VSSLNVSVATGICLFEAV 241
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: RLMB_BURSP (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Burkholderia sp. GN=rlmB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12 Identity = 56/173 (32.37%), Postives = 80/173 (46.24%), Query Frame = 1 Query: 16 LWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHLV 534 L +ALD VTDP NLG +R A GA V+ + +A L+ +KA+ G+ E V N+ + L + G +V+ G+ L +I LV+G+EG G+R L +C +VRIP AG V+SLNVSVA+G+ L V Sbjct: 97 LLLALDGVTDPHNLGACLRVADGAGAHAVIAPRRRAAGLTAAAAKAANGAAETVPYLTVINLARALRALKNAGIQVI-GTADDATTSLFDIQLDGALALVMGAEGAGMRRLTREACDEVVRIP-------LAGH---------------------VQSLNVSVASGICLFEAV 240
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: RLMB_NEIMA (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Neisseria meningitidis serogroup A GN=rlmB PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.106e-11 Identity = 55/182 (30.22%), Postives = 77/182 (42.31%), Query Frame = 1 Query: 10 PSLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHLVGHQVSNN 555 P L + LD +TDP NLG +R+A G V+ SA L+ VSK ++G+ E V N+ + L E G ++G + A L V+G+EG G+R L C LV IP F VES+NVSV+AG++L +V N Sbjct: 95 PPLLLILDGITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVASGAAETVPYITVTNLARTLRELKEYGIWIIGTDMGGNA-DLYHCDLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP----------------------------MFGTVESMNVSVSAGMVLSETRRQRVLKN 247 The following BLAST results are available for this feature:
BLAST of EY702704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702704 ID=EY702704; Name=EY702704; organism=Citrus sinensis; type=EST; length=876bpback to top |