EY702704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: RLMB_PASMU (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Pasteurella multocida GN=rlmB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11 Identity = 54/180 (30.00%), Postives = 81/180 (45.00%), Query Frame = 1 Query: 16 LWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFL--VSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHLVGHQVS 549 L + LD VTDP NLG +R+A G V++ SA L+ + K + G+ E+V L N+ + L + N W V ++ + ++ G LV+G+EG G+R L C L+ IP AG +V SLNVSVA GV L +V +++ Sbjct: 96 LLLVLDGVTDPHNLGACLRTADAAGVCAVIVPKDKSAQLTAIARKVACGAAEVVPLIRVTNLARTLRELQQKHNIWVVGTAGEATNTLYQTQLTGG--LALVMGAEGEGMRRLTREHCDQLISIP-------MAG---------------------SVSSLNVSVATGVCLFEIVRQRLA 245
BLAST of EY702704 vs. ExPASy Swiss-Prot
Match: RLMB_XANCP (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Xanthomonas campestris pv. campestris GN=rlmB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11 Identity = 58/175 (33.14%), Postives = 76/175 (43.43%), Query Frame = 1 Query: 13 SLWVALDEVTDPQNLGVIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENG-WRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPVDVTAGEIDDVDANGNHGSAEQFQSFMAVESLNVSVAAGVLLHHLV 534 +L + LD V DP NLG +RSA G + VV+ SA ++ V K SAG+ + + + N+ + L + G W L G L + LVLG EG GLR L C LV+IP +P D +ESLNVSVA GV L V Sbjct: 99 ALVLILDGVQDPHNLGACLRSAAAAGVTAVVIPKDKSATVNATVRKTSAGAADRIPVVAVTNLARCLRDLQKQGVW--LYGLAGEAEASLYSVDLRGNVGLVLGGEGDGLRRLTREHCDGLVKIP--MPGD--------------------------IESLNVSVATGVTLFEAV 243 The following BLAST results are available for this feature:
BLAST of EY702704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702704 ID=EY702704; Name=EY702704; organism=Citrus sinensis; type=EST; length=876bpback to top |