DR908509
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_CHLTE (Serine hydroxymethyltransferase OS=Chlorobium tepidum GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.302e-19 Identity = 50/112 (44.64%), Postives = 68/112 (60.71%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP-GDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA 335 K Y ++ N A+A++ + GY +VSGG+ NHL+L+DLR ++G E +L A IT+NKN VP DKS V GIRIG+PAMTTRG E I +FI + +A Sbjct: 300 KAYAQQIKDNAAAMAAKFLAAGYHIVSGGTKNHLMLLDLRNKNVNGKVAENLLHEAGITVNKNMVPFDDKSPFVTSGIRIGTPAMTTRGMKVAEAEKIVEFIDRVISAANDA 411
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_AQUAE (Serine hydroxymethyltransferase OS=Aquifex aeolicus GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.302e-19 Identity = 55/117 (47.01%), Postives = 74/117 (63.25%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQ 350 K Y +VV N R LA L + G+K+V+GG+D+H+VLVDLR I G EK L+ A IT+NKN+VP D GIRIG+ A+TTRG E E IA +I+E V ++ +K +Q Sbjct: 279 KEYAKQVVENARVLAEELKKYGFKIVTGGTDSHIVLVDLRNKNIIGKDAEKALEKAGITVNKNAVPFDPLPPTKTSGIRIGTAALTTRGMKEDEMRKIAGWINE-VLSNMDDEKTIQ 394
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_ACISJ (Serine hydroxymethyltransferase OS=Acidovorax sp. (strain JS42) GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.302e-19 Identity = 54/155 (34.84%), Postives = 87/155 (56.13%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPI 464 K YQ +V N + A L++ G ++VSG +++H++LVDLR GI G E L A IT+NKN++P D + +V GIR+G+PA+TTRGF E+E A+ + + ++ +P+ N+ +R +V ALT++FP+ Sbjct: 282 KQYQQQVTKNAKVFAETLIQRGLRIVSGRTESHVMLVDLRAKGITGKEAEAALGKAHITINKNAIPNDPEKPMVTSGIRVGTPAITTRGFKEEETRLTANLVADVLD----------------------NPHDEA--NLEAVRAKVHALTSRFPV 412
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_ACIRA (Serine hydroxymethyltransferase OS=Acinetobacter radioresistens GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.302e-19 Identity = 52/102 (50.98%), Postives = 66/102 (64.71%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 305 K YQ +VV N +A+A L+E GY +VSGG+ NHL L+ L I G + L A IT+NKNSVP D +S V GIRIG+PA+TTRGF E E +A +I Sbjct: 284 KAYQQQVVKNAQAMAEVLIERGYDVVSGGTKNHLFLLSLIKQDITGKDADAWLGAAHITVNKNSVPNDPRSPFVTSGIRIGTPAVTTRGFGEAEVRDLASWI 385
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBL (Serine hydroxymethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.302e-19 Identity = 46/106 (43.40%), Postives = 71/106 (66.98%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKS-ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 317 K Y N+VV+N + LA L + G++++SGG+D HL+L+D+ G+ G+ EK L A IT+NKN++P D + + P G+RIG+PA+TTRG E E + +I E + Sbjct: 284 KDYANQVVANAKVLAQSLADQGFRIISGGTDTHLMLIDVFAAGMLGSEAEKALGEAGITVNKNAIPFDTNPPMKPSGVRIGTPALTTRGMKEPEMRQVGIWIAESL 389
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA1_BURS3 (Serine hydroxymethyltransferase 1 OS=Burkholderia sp. (strain 383) GN=glyA1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.302e-19 Identity = 52/104 (50.00%), Postives = 67/104 (64.42%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 311 K Y + V++N +AL L G LV+GG+DNHL+LVDLRP G+ GA VE+ L+ A IT NKN +P D + V GIR+G+PA TTRGF EF + I E Sbjct: 288 KTYIDNVLANAQALGEVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAPVEQALERAGITCNKNGIPFDTEKPTVTSGIRLGTPAGTTRGFGVAEFREVGRLILE 391
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA1_AGRT5 (Serine hydroxymethyltransferase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glyA1 PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.302e-19 Identity = 53/104 (50.96%), Postives = 64/104 (61.54%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 311 K Y +VV N +ALA L+E G +VSGG+DNHL+LVDLR G R E L A IT NKN +P D + V G+R+G+PA TTRGF E EF I I E Sbjct: 288 KDYAAQVVKNAKALAETLIEGGLDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYITCNKNGIPFDPEKPFVTSGVRLGTPAGTTRGFKEAEFREIGKLIVE 391
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_THEEB (Serine hydroxymethyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=glyA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.007e-19 Identity = 46/104 (44.23%), Postives = 70/104 (67.31%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 311 K Y +V+ N +ALA+ L +LVSGG+DNHL+L+DLR + + G ++++ IT NKN++P D S V G+R+G+PA+TTRGF+E EF +A+ I + Sbjct: 283 KAYCGQVIRNAQALAAGLQARQLRLVSGGTDNHLMLIDLRSVNLTGKEADRLMGEIHITTNKNTIPFDPASPFVTSGLRLGTPALTTRGFTEVEFAEVAEIISD 386
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_PSYCK (Serine hydroxymethyltransferase OS=Psychrobacter cryohalolentis (strain K5) GN=glyA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.007e-19 Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPI 464 K YQ +VV N +A+A + + GY+++SGG++NHL+L+ L + G +K L A IT+NKN+VP D KS V GIRIG+PA+TTRGF+E + +A +I + V S+ + + A++RG+VEA+ + P+ Sbjct: 283 KTYQQQVVKNAQAMAKVIQDRGYEIISGGTENHLMLISLVKQEMTGKEADKWLGDAHITVNKNAVPNDPKSPFVTSGIRIGTPAITTRGFNEAQAGDLAGWICD-----------VLDSRGDEAV-------------TAEVRGKVEAICKELPV 413
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_PROMM (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=glyA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.007e-19 Identity = 48/102 (47.06%), Postives = 71/102 (69.61%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 305 +VY +VV+N + LA R+ E G +VSGG+DNHLVL+DLR +G+ G + ++ +IT NKN+VP D +S V G+R+G+ A+TTRGF ++ F +AD I Sbjct: 289 QVYSCQVVANAQVLAGRIQERGIAVVSGGTDNHLVLLDLRSIGMTGKVADLLVSEVNITANKNTVPFDPESPFVTSGLRLGTAALTTRGFDDEAFREVADVI 390 The following BLAST results are available for this feature:
BLAST of DR908509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908509 ID=DR908509; Name=DR908509; organism=Citrus sinensis; type=EST; length=625bpback to top |