DR908509
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYM_RABIT (Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 1.812e-40 Identity = 84/155 (54.19%), Postives = 113/155 (72.90%), Query Frame = 3 Query: 9 YQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNF-VTSPNFSLMNNVADLRGRVEALTTQFPIPG 470 Y +V+ N RA+A L+E GY LVSGG+DNHLVLVDLRP G+DGAR E++L++ SIT NKN+ PGD+SA+ PGG+R+G+PA+T+R F E +F + DFI EGV I LE K+ + +KLQDF +F + P S ++ADLR RV+ FP+PG Sbjct: 350 YSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKR--KTAKLQDFKSFLLKDPETS--QHLADLRRRVQQFARAFPMPG 500
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 4.036e-40 Identity = 82/154 (53.25%), Postives = 110/154 (71.43%), Query Frame = 3 Query: 9 YQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 470 Y +V+ N RA+A L+E GY LVSGG+DNHLVLVDLRP G+DGAR E++L++ SIT NKN+ PGD+SA+ PGG+R+G+PA+T+R F E +F + DFI EGV I LE K + +KLQDF +F+ + +A+LR RVE FP+PG Sbjct: 350 YSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKS--KTAKLQDFKSFLLKDS-ETSQRLANLRQRVEQFARAFPMPG 500
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.036e-40 Identity = 83/155 (53.55%), Postives = 113/155 (72.90%), Query Frame = 3 Query: 9 YQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNF-VTSPNFSLMNNVADLRGRVEALTTQFPIPG 470 Y +++ N +A+A+ L+E GY LVSGG+DNHLVLVDLRP G+DGAR E++L++ SIT NKN+ PGD+SA+ PGG+R+G+PA+T+RGF E +F + FI EGV I LE K + +KLQDF +F + P S + +ADLR RVE FP+PG Sbjct: 350 YSLQILKNAQAMANALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRGFLEDDFRKVVGFIDEGVNIGLEVKS--KTTKLQDFKSFLLKDPETS--HQLADLRQRVEQFARAFPMPG 500
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 8.991e-40 Identity = 80/156 (51.28%), Postives = 113/156 (72.44%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 470 K YQ +V+SN A L+E GY+LVSGG+DNHLVLV+L+P GIDG+RVEK+L+ I NKN+VPGD SA+VPGGIR+G+PA+T+RGF E++F +A++ + V I L+ K QG+KL+DF++ + S + ++ + +A LR VE QFP G Sbjct: 353 KAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSS-TIQSEIAKLRHEVEEFAKQFPTIG 507
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYC_PONAB (Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 7.612e-39 Identity = 79/158 (50.00%), Postives = 111/158 (70.25%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKK-LVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 473 KVYQ++VV+NCRAL+ L ELGYK+V+GGSDNHL+LVDLR G DG R EK+L+ SI NKN+ PGD+SAL P G+R+G+PA+T+RG EK+F +A FIH G+E+TL+ + + L++F + + V LR +VE+ + FP+PG+ Sbjct: 325 KVYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVRATLKEFKERLAGDKY--QGAVQALREKVESFASLFPLPGL 480
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 7.612e-39 Identity = 83/156 (53.21%), Postives = 110/156 (70.51%), Query Frame = 3 Query: 9 YQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKK--LVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 470 Y +V+ N + LA R+ + GY L +GG+DNHL+LVDLRP+G++GAR E +LD+A I NKN+ PGD SAL PGGIR+G+PA+T+RGF E++F + DFIHEGV+I AKK G L+DF +F T N +VADL RVE +T+F IPG Sbjct: 352 YGEQVLKNAKTLAERMKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQI---AKKYNAEAGKTLKDFKSF-TETNEPFKKDVADLAKRVEEFSTKFEIPG 503
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYC_HUMAN (Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens GN=SHMT1 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.298e-38 Identity = 79/158 (50.00%), Postives = 110/158 (69.62%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKK-LVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 473 KVYQ++VV+NCRAL+ L ELGYK+V+GGSDNHL+LVDLR G DG R EK+L+ SI NKN+ PGD+SAL P G+R+G+PA+T+RG EK+F +A FIH G+E+TL+ + + L++F + + V LR VE+ + FP+PG+ Sbjct: 325 KVYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVRATLKEFKERLAGDKYQAA--VQALREEVESFASLFPLPGL 480
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYC_BOVIN (Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1 PE=2 SV=3) HSP 1 Score: 159.458 bits (402), Expect = 1.298e-38 Identity = 80/158 (50.63%), Postives = 110/158 (69.62%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLV-QGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 473 + YQ +VV+NCRALA L+ LGY++V+GGSDNHL+LVDLR G DG R EK+L+ SI NKN+ PGDKSAL P G+R+G+PA+T+RG E++F +A FIH G+E+TL+ + V + L++FM + VA LR VE+ T FP+PG+ Sbjct: 325 RAYQRQVVANCRALAEALMGLGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQDAVGVKATLKEFMEKLAGAE-EHHRAVAALRAEVESFATLFPLPGL 481
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYC_SHEEP (Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1 PE=1 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 2.892e-38 Identity = 79/158 (50.00%), Postives = 109/158 (68.99%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLV-QGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 473 + YQ +VV+NCRALA L+ LGY++V+GGSDNHL+LVDLR G DG R EK+L+ SI NKN+ PGDKSAL P G+R+G+PA+T+RG E++F +A FIH G+E+TL+ + V + L++FM + V LR VE+ T FP+PG+ Sbjct: 325 RAYQRQVVANCRALAEALMGLGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFRKVAHFIHRGIELTLQIQDAVGVKATLKEFMEKLAGAE-EHQRAVTALRAEVESFATLFPLPGL 481
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYC_MOUSE (Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 8.416e-38 Identity = 76/158 (48.10%), Postives = 110/158 (69.62%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKK-LVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 473 K+YQ +V++NCRAL+ L ELGYK+V+GGSDNHL+L+DLR G DG R EK+L+ SI NKN+ PGDKSAL P G+R+G+PA+T+RG E++F +A FIH G+E+TL+ + + + L++F + + + VA LR VE + F +PG+ Sbjct: 319 KIYQLQVLANCRALSDALTELGYKIVTGGSDNHLILMDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQSHMATKATLKEFKEKLAGDE-KIQSAVATLREEVENFASNFSLPGL 475 The following BLAST results are available for this feature:
BLAST of DR908509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908509 ID=DR908509; Name=DR908509; organism=Citrus sinensis; type=EST; length=625bpback to top |