DR908509
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_PROVI (Serine hydroxymethyltransferase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=glyA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.749e-19 Identity = 52/100 (52.00%), Postives = 65/100 (65.00%), Query Frame = 3 Query: 9 YQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP-GDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 305 Y +V SN A++ R + LGY +VSGG+ NHL+L+DLR I G VE L A IT+NKN VP DKS V GIRIG+ AMTTRG +E + IA+ I Sbjct: 302 YAMQVRSNAAAMSERFLSLGYNIVSGGTKNHLMLLDLRNKDITGKVVENTLHEAGITVNKNMVPFDDKSPFVTSGIRIGTAAMTTRGMNEDDSRLIAELI 401
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_JANMA (Serine hydroxymethyltransferase OS=Janthinobacterium sp. (strain Marseille) GN=glyA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.749e-19 Identity = 49/107 (45.79%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 320 K YQ +VV N ALA L+ G ++VS +++H++LVDLR I G E +L A IT NKN++P D + V GIR+GSPAMTTRGF E E + + I + +E Sbjct: 282 KTYQQQVVKNADALAKALIARGLRIVSNRTESHVMLVDLRAKKITGKDAENLLGSAHITCNKNAIPNDPEKPFVTSGIRLGSPAMTTRGFKEAEATKVGNLIADVLE 388
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_HALWD (Serine hydroxymethyltransferase OS=Haloquadratum walsbyi (strain DSM 16790) GN=glyA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.749e-19 Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGID--GARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 320 + Y + V N LA+ L + G +VSGG+DNHLVLVDLRP + G VE L+ A I +N N+VPG+ +SA P GIR+G+PA+TTRGF+E + + + E ++ Sbjct: 281 EAYAEQTVKNAEELANTLTDAGLSVVSGGTDNHLVLVDLRPSHPETTGKEVEAALESAGIIMNANTVPGETRSAFNPSGIRVGTPALTTRGFTESTVREVGELMIELID 389
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_AYWBP (Serine hydroxymethyltransferase OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=glyA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.749e-19 Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGID--GARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 317 K YQ +V+ N A + GY++VSG +DNHL L+D++ + GA++ +L+ +I +NKN++P D + V GIRIG+PAMTT GF E +FVA+AD + + + Sbjct: 297 KEYQKQVIKNANTFAKAFQQKGYRIVSGSTDNHLFLIDVKHKNTEFTGAKIANMLEKINIVVNKNTIPFDQEKPFVTSGIRIGTPAMTTVGFRENDFVAVADLMDKAI 404
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_ALISL (Serine hydroxymethyltransferase OS=Aliivibrio salmonicida (strain LFI1238) GN=glyA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.749e-19 Identity = 52/119 (43.70%), Postives = 75/119 (63.03%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI-----HEGVEITLEAKK 341 K YQ +VV+N +A+ + + GY +VSG ++NHL LVDL I G + L A+IT+NKNSVP D +S V GIR+GSP++T RGFSE++ +A ++ + G E +EA K Sbjct: 284 KEYQVRVVANAKAMVAEFLARGYNIVSGSTENHLFLVDLIDKDITGKEADAALGSANITVNKNSVPNDPRSPFVTSGIRVGSPSITRRGFSEEDAKNLAGWMCDILDNMGDESVIEATK 402
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA2_VIBPA (Serine hydroxymethyltransferase 2 OS=Vibrio parahaemolyticus GN=glyA2 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.749e-19 Identity = 46/102 (45.10%), Postives = 68/102 (66.67%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 305 K Y + V++N + LA L G +V+GG+D HL+LVDLRP G+ G + E+ L+ A IT NKN +P D + ++ GIR+G+PA T+RGF +EF I ++I Sbjct: 294 KTYIDSVINNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPFDTEKPMITSGIRLGTPAGTSRGFGAEEFKLIGNWI 395
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA2_PSEAE (Serine hydroxymethyltransferase 2 OS=Pseudomonas aeruginosa GN=glyA2 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.749e-19 Identity = 49/102 (48.04%), Postives = 67/102 (65.69%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 305 K YQ +V+ N +A+A + GY +VSGG+DNHL+L+ L G+ G + L A IT+NKN+VP D +S V GIRIG+PA+TTRGF E E +A +I Sbjct: 285 KDYQAQVIRNAKAMAEVFIGRGYDVVSGGTDNHLMLISLVKQGLTGKAADAALGAAHITVNKNAVPNDPQSPFVTSGIRIGTPAVTTRGFREGECRELAGWI 386
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA2_HAHCH (Serine hydroxymethyltransferase 2 OS=Hahella chejuensis (strain KCTC 2396) GN=glyA2 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.749e-19 Identity = 52/122 (42.62%), Postives = 76/122 (62.30%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQ 365 K YQ +VV N R +A ++ GY +VSGG+D+HL LVDL I G + L A+IT+NKN+VP D +S V G+RIG+PA+T RG E E + D+I + ++ +E ++ +Q K Q Sbjct: 285 KQYQAQVVKNARVMADTFIQRGYDIVSGGTDDHLFLVDLIKKDITGKDADAALGRANITVNKNAVPNDPRSPFVTSGLRIGTPAITRRGMGEVEAKELTDWICDVLD-DIENEETIQRVKQQ 405
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA1_PSESM (Serine hydroxymethyltransferase 1 OS=Pseudomonas syringae pv. tomato GN=glyA1 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.749e-19 Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 305 K YQ +V+ N +A+A + G+ +VSGG+DNHL LV L G+ G + L A IT+NKNSVP D +S V G+RIG+PA+TTRGF + + +A +I Sbjct: 285 KTYQQQVIDNAQAMAQVFITRGFDVVSGGTDNHLFLVSLIRQGLTGKEADAALGRAHITVNKNSVPNDPQSPFVTSGLRIGTPAVTTRGFKVTQCIELAGWI 386
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_VIBFM (Serine hydroxymethyltransferase OS=Vibrio fischeri (strain MJ11) GN=glyA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.143e-18 Identity = 52/119 (43.70%), Postives = 75/119 (63.03%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI-----HEGVEITLEAKK 341 K YQ +VV+N +A+ + + GY +VSG ++NHL LVDL I G + L A+IT+NKNSVP D +S V GIRIGSP++T RGF+E++ +A ++ + G E +EA K Sbjct: 284 KEYQARVVANAKAMVAEFLARGYNIVSGSTENHLFLVDLIDKDITGKEADAALGSANITVNKNSVPNDPRSPFVTSGIRIGSPSITRRGFTEEDAKNLAGWMCDILDNMGDESVIEATK 402 The following BLAST results are available for this feature:
BLAST of DR908509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908509 ID=DR908509; Name=DR908509; organism=Citrus sinensis; type=EST; length=625bpback to top |