DR908509
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_DESVM (Serine hydroxymethyltransferase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=glyA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.492e-18 Identity = 49/100 (49.00%), Postives = 63/100 (63.00%), Query Frame = 3 Query: 9 YQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 305 YQ +VV N LA L GY LVSGG+DNHL+L+DL I G E LD A +T NKN+VP + +S V G+R+G+PA+TTRG E E +A +I Sbjct: 281 YQQQVVKNAARLAGCLTAAGYDLVSGGTDNHLMLMDLTAKDITGKDAEHALDKAGMTANKNTVPFETRSPFVTSGVRLGTPALTTRGMKEAEMEKVAAWI 380
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_CAMHC (Serine hydroxymethyltransferase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=glyA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.492e-18 Identity = 48/102 (47.06%), Postives = 65/102 (63.73%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 305 K Y +V +NC+ L L++ G+ LVSGG+DNHL+LV G L+ A IT+NKN+VPG+ +S V GIR+GS A+T+RG EKEF IA+ I Sbjct: 279 KTYAKQVKANCKILGDTLMKRGFDLVSGGTDNHLILVSFLKKDYSGKDASNALENAGITVNKNTVPGETRSPFVTSGIRVGSAALTSRGMKEKEFEWIANKI 380
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA2_VIBVY (Serine hydroxymethyltransferase 2 OS=Vibrio vulnificus (strain YJ016) GN=glyA2 PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.492e-18 Identity = 46/111 (41.44%), Postives = 72/111 (64.86%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE 332 K Y + V++N + LA L G +V+GG+D HL+LVDLRP G+ G + E+ L+ A IT NKN +P D + ++ G+R+G+PA T+RGF +EF I +I + ++ +E Sbjct: 294 KTYIDSVINNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPFDTEKPMITSGVRLGTPAGTSRGFGAEEFKLIGHWIGDVLDGLVE 404
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA2_PSEF5 (Serine hydroxymethyltransferase 2 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=glyA2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.492e-18 Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 305 K YQ +V+ N +A+A ++ GY +VSGG+DNHL LV L G+ G + L A IT+NKN+VP D +S V G+RIG+PA+TTRGF + +A +I Sbjct: 285 KAYQQQVIDNAQAMAGVFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTSGLRIGTPAVTTRGFKVTQCTELAGWI 386
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_STAHJ (Serine hydroxymethyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=glyA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.949e-18 Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR-PMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPI 464 KVYQ +V+ N + L+ L E G+++VSGG+DNHL+ VD++ + + G E LD IT NKN++P D + A V GIR+G+P TTRGF E+ F + G I+L K +KL+ + R RV LT ++P+ Sbjct: 279 KVYQEQVIKNAKVLSQTLQEEGFRIVSGGTDNHLLSVDVKNSVNVTGKEAEATLDSIGITCNKNTIPFDQEKAFVTSGIRLGTPTATTRGFDEEAFKEV------GRIISLALKNPNNDTKLK------------------EARERVSRLTAKYPL 410
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_MOOTA (Serine hydroxymethyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=glyA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.949e-18 Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKL 344 K YQ ++V+N R LA L+ G+ LVSGG+DNHL+LVDLR I G E IL IT+NKN++P D + V GIR+G+ A+T+RG V +A I + + KKL Sbjct: 281 KRYQEQIVTNARTLADALMGYGFNLVSGGTDNHLMLVDLRNKNITGREAEDILASVQITVNKNAIPFDPQKPSVTSGIRLGTAALTSRGMDADAMVQVARAIDLALSYGPDEKKL 395
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_FRAP2 (Serine hydroxymethyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=glyA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.949e-18 Identity = 47/104 (45.19%), Postives = 68/104 (65.38%), Query Frame = 3 Query: 9 YQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 317 YQ +V+ N +A+ L E ++SGG++NHL+L+D+ G G E L A+IT+NKNS+P D +S V G+RIGSPA+TTRGF E E IA+++ + V Sbjct: 287 YQKQVLINAKAMEKVLKERNINIISGGTNNHLLLLDITNTGFSGKEAEAALGRANITVNKNSIPNDPRSPFVTSGLRIGSPAITTRGFKEAECEQIANWLADVV 390
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_CHLP8 (Serine hydroxymethyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=glyA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.949e-18 Identity = 59/161 (36.65%), Postives = 85/161 (52.80%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP-GDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVAD----LRGRVEALTTQFPIPG 470 K Y ++ N A+A++ + Y +VSGG+ NHL+L+DLR ++G E +L A IT+NKN VP DKS V GIR+G+PAMTTRG K+ + K+ +F++ V S + +NVAD +R V L QFP+ G Sbjct: 300 KAYAQQIKDNAAAMAAKFLAADYHIVSGGTKNHLMLLDLRNKNVNGKVAENLLHDAGITVNKNMVPFDDKSPFVTSGIRVGTPAMTTRGM-----------------------KVAEAEKIVEFIDRVISA--ANDDNVADVCKQVRAEVRELCLQFPLNG 435
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_BACSK (Serine hydroxymethyltransferase OS=Bacillus clausii (strain KSM-K16) GN=glyA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.949e-18 Identity = 59/155 (38.06%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPI 464 K Y ++++N + L +L G +VSGG+DNHL+L+DLR + + G EK LD IT NKN++P D + V GIRIG+ A+T+RGF E E D I E + +TL+ N +N+V R RV ALT FP+ Sbjct: 283 KTYAKQIIANAKRLGEKLQAEGVDIVSGGTDNHLLLLDLRSLQLTGKVAEKALDAVGITTNKNAIPFDPEKPFVTSGIRIGTAAVTSRGFGENEM----DEIGELIALTLK-----------------NIDNEEALNSV---RSRVAALTKTFPM 413
BLAST of DR908509 vs. ExPASy Swiss-Prot
Match: GLYA_BACHD (Serine hydroxymethyltransferase OS=Bacillus halodurans GN=glyA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.949e-18 Identity = 58/155 (37.42%), Postives = 80/155 (51.61%), Query Frame = 3 Query: 3 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPI 464 K Y ++ N + L +L G LVSGG+DNHL+L+DLR +G+ G EK LD IT NKN++P D +S V GIRIG+ A+T+RG E+ I G I L K + K+ + R RV+ALT +FP+ Sbjct: 279 KSYGEAIIRNAKRLGEKLTSEGIDLVSGGTDNHLLLLDLRSLGLTGKVAEKALDDVGITTNKNTIPFDPESPFVTSGIRIGTAAVTSRGLDEEAMDEI------GATIALTLKNVDNEEKMN------------------EARERVDALTAKFPM 409 The following BLAST results are available for this feature:
BLAST of DR908509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908509 ID=DR908509; Name=DR908509; organism=Citrus sinensis; type=EST; length=625bpback to top |