DR406162

Overview
NameDR406162
Unique NameDR406162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8502 contig Csv1_Contig8502:412..1160. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: Y1459_PYRHO (Uncharacterized sugar kinase PH1459 OS=Pyrococcus horikoshii GN=PH1459 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.720e-20
Identity = 73/247 (29.55%), Postives = 128/247 (51.82%), Query Frame = 1
Query:   10 LKENGVSADGINFDQGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDK-AEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESEALNY 747
            L +  V   GI  D+   T + FV L+      F+ Y +  A   +  +++N +++  AK+ ++GS+ L   P R   ++ +K  K   +L+++D NLRL LW   EE   +++    K A+++K S+ E+ +L     ++ + ++        L  +TLG  GCR         V +++VN +DTTGAGDAF+  LL  ++  + +      L ++ KFAN   A++T K+GA  + P + E L Y
Sbjct:   73 LSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLY-DDVAYFNMTLNDINWDIVEEAKIVNFGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQG-VEVKGSM--------LTAITLGPKGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGL-----DLLKLGKFANLVAALSTQKRGAW-STPRKDELLKY 301          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_BACSK (5-dehydro-2-deoxygluconokinase OS=Bacillus clausii (strain KSM-K16) GN=iolC PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.363e-17
Identity = 68/247 (27.53%), Postives = 116/247 (46.96%), Query Frame = 1
Query:   10 LKENGVSADGINFD-QGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTG-SDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKS---FRGAVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESE 735
            ++E GV    +  D +G +  L F  + +  E   + YR  +AD+ L PDE++   +RSAKV      +L   P R A L+A+  AK AG  + ++ + R   W S EE       +   A ++  +  E + + G S   ++++A  L+    +L+++  G  G   Y  S   FR  V  +  N + T GAGD++    L  L+    +        + L+F +A  +I  +K  +  A+PT SE
Sbjct:   79 MREAGVDTSQLVIDREGHKAGLTFTEILSPEECSILMYREKAADLYLSPDEIDAGYVRSAKVLLISGTALAQSPSREAALKAVSLAKAAGTKVVFELDYRPYTWSSREETSVYYTLLAGMAHIVIGTREEYDIMEGASASGNEQTAKMLFAKEPELVVIKHGVDGSYAYLPSGETFRAGV--YKTNVLKTFGAGDSYASAFLYGLLRGYDI-------DQALRFGSASASIVVSKHSSSEAMPTLSE 316          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_LISMO (5-dehydro-2-deoxygluconokinase OS=Listeria monocytogenes GN=iolC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.037e-17
Identity = 60/245 (24.49%), Postives = 119/245 (48.57%), Query Frame = 1
Query:   10 LKENGVSADGINFD-QGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALS-LWHPNLKLLLVTLGEHGCRYYTKSFRG-AVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESE 735
            +++  ++ DG+  D +G +  LAF  +++  E   + YR   AD+ L P+E++ + I+ A+V      +L   P R A L+A+  A++   +++++ + R   W + EE       + ++A+VI  +  E + +       +E+  + L+    K++++  G  G   YTK+       A+    + T GAGD++    L  L  D+S+          LK+ +A  +I  +K  +  A+PT  E
Sbjct:   79 MRDLAINTDGMVKDTEGRKVGLAFTEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKAVSLARKNDVVVAFELDYRPYTWKNSEETAVYYSLVAEQADVIIGTRDEFDMMENQVGGKNEATKAYLFQHQAKIVVIKHGVEGSFAYTKAGETFQAQAYKTKVLKTFGAGDSYASAFLYGLFSDESI-------ETALKYGSAAASIVVSKHSSSDAMPTADE 316          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_BACHD (5-dehydro-2-deoxygluconokinase OS=Bacillus halodurans GN=iolC PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.180e-17
Identity = 65/244 (26.64%), Postives = 119/244 (48.77%), Query Frame = 1
Query:   22 GVSADGINFDQ-GARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTG-SDKID-DESALSLWHPNLKLLLVTLGEHGCRYYTK---SFRGAVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESE 735
            GV    +  DQ G +T LAF  +++  E   + YR   AD+ L P+E+N   IR +K+      +L   P R A L+A++ AK     + ++ + R   W +PEE       + ++++++  +  E + L   ++K D DE+   L+  + +L+++  G  G   YTK   ++RG   A+    + T GAGD++    L  L+  + +          LK+ +A  +I  +K  +  A+P+  E
Sbjct:   83 GVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSPELIVIKHGVEGSFAYTKAGEAYRGY--AYKTKVLKTFGAGDSYASAFLYALISGKGI-------ETALKYGSASASIVVSKHSSSDAMPSVEE 317          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_GEOKA (5-dehydro-2-deoxygluconokinase OS=Geobacillus kaustophilus GN=iolC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.507e-16
Identity = 66/246 (26.83%), Postives = 115/246 (46.75%), Query Frame = 1
Query:   10 LKENGVSADGINFDQ-GARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSD--KIDDESALSLWHP-NLKLLLVTLGEHGCRYYTK---SFRGAVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPT 726
            LK NG+    +  D+ G+ T LAF  +++  +   + YR+  AD+ L P++++ + IR AK       +L   P R A   A+  A+  G ++ +D + R   W S EE         +K +VI  +  E + +   D  + DDE     W   N K++++  G+ G   YTK   +F G +  F  N V T GAGD++    +  L++D  +        + +++  A  +I  +      A+PT
Sbjct:   80 LKNNGIDTSHVITDKSGSVTGLAFTEIKSPTDCSILMYRDNVADLKLEPNDIDEDYIRRAKCLLISGTALAKSPSREAVFLALDYARRHGTVVVFDLDYRPYTWQSKEETAIYYNLAAEKCDVIIGTREEFDMMERFDGQRRDDEQTARKWFDYNAKIVVIKHGKDGSIAYTKTGETFVGTI--FPANIVKTFGAGDSYAAGFIYGLMNDWPI-------PKAMEYGAAAASIVISSHSCSDAMPT 316          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_LISMH (5-dehydro-2-deoxygluconokinase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=iolC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16
Identity = 58/245 (23.67%), Postives = 117/245 (47.76%), Query Frame = 1
Query:   10 LKENGVSADGINFD-QGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALS-LWHPNLKLLLVTLGEHGCRYYTKSFRG-AVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESE 735
            +++  ++ DG+  D +G +  LAF  +++  E   + YR   AD+ L P+E++ + I+ A+V      +L   P R A L+A+  A++    ++++ + R   W + EE       + ++A+VI  +  E + +       +E+  + L+    +++++  G  G   YTK+       A+    + T GAGD++    L  L   +S+          LK+ +A  +I  +K  +  A+PT  E
Sbjct:   79 MRDLSINTDGMVKDTEGRKVGLAFTEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKAVSLARKNDVAIAFELDYRPYTWTNTEETAVYYSLVAEQADVIIGTRDEFDMMENQVGGKNEATKAHLFQHQAEIVVIKHGVEGSFAYTKAGETFQAKAYKTKVLKTFGAGDSYASAFLYGLFSGESI-------ETALKYGSAAASIVVSKHSSSDAMPTADE 316          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_LISMF (5-dehydro-2-deoxygluconokinase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=iolC PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.276e-15
Identity = 58/245 (23.67%), Postives = 117/245 (47.76%), Query Frame = 1
Query:   10 LKENGVSADGINFD-QGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALS-LWHPNLKLLLVTLGEHGCRYYTKSFRG-AVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESE 735
            +++  ++ DG+  D +G +  LAF  +++  E   + YR   AD+ L P+E++ + I+ A+V      +L   P R A L+A+  A++    ++++ + R   W + EE       + ++A+VI  +  E + +       +E+  + L+    +++++  G  G   YTK+       A+    + T GAGD++    L  L   +S+          LK+ +A  +I  +K  +  A+PT  E
Sbjct:   79 MRDLSINTDGMVKDTEGRKVGLAFTEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKAVSLARKNDVAVAFELDYRPYTWTNTEETAVYYSLVAEQADVIIGTRDEFDMMENQVGGKNEATKAHLFQHQAEIVVIKHGVEGSFAYTKAGETFQAKAYKTKVLKTFGAGDSYASAFLYGLFSGESI-------ETALKYGSAAASIVVSKHSSSDAMPTADE 316          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_LISMC (5-dehydro-2-deoxygluconokinase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=iolC PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.276e-15
Identity = 58/245 (23.67%), Postives = 117/245 (47.76%), Query Frame = 1
Query:   10 LKENGVSADGINFD-QGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALS-LWHPNLKLLLVTLGEHGCRYYTKSFRG-AVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESE 735
            +++  ++ DG+  D +G +  LAF  +++  E   + YR   AD+ L P+E++ + I+ A+V      +L   P R A L+A+  A++    ++++ + R   W + EE       + ++A+VI  +  E + +       +E+  + L+    +++++  G  G   YTK+       A+    + T GAGD++    L  L   +S+          LK+ +A  +I  +K  +  A+PT  E
Sbjct:   79 MRDLSINTDGMVKDTEGRKVGLAFTEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKAVSLARKNDVAVAFELDYRPYTWTNTEETAVYYSLVAEQADVIIGTRDEFDMMENQVGGKNEATKAHLFQHQAEIVVIKHGVEGSFAYTKAGETFQAKAYKTKVLKTFGAGDSYASAFLYGLFSGESI-------ETALKYGSAAASIVVSKHSSSDAMPTADE 316          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: IOLC_LISIN (5-dehydro-2-deoxygluconokinase OS=Listeria innocua GN=iolC PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.276e-15
Identity = 59/247 (23.89%), Postives = 119/247 (48.18%), Query Frame = 1
Query:   10 LKENGVSADGINFDQ-GARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESAL-SLWHPNLKLLLVTLGEHGCRYYTK---SFRGAVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESE 735
            +++  ++ DG+  D  G +  LAF  +++  E   + YR   AD+ L P+E++ + I+  +V      +L   P R A L+A+  A++   +++++ + R   W + EE       + ++A+VI  +  E + +      ++E  + +L+    +++++  G  G   YTK   +FR    A+    + T GAGD++    L  L   +++          LKF +A  +I  +K  +  A+PT  E
Sbjct:   79 MRDLNINTDGMVKDTAGRKVGLAFTEIKSPEECSILMYRENVADLYLTPEEISEDYIKETRVLLVSGTALAQSPSREAVLKAVHLAQKNDVIVAFELDYRPYTWKNTEETAVYYSLVAEQADVIIGTRDEFDMMENQIGGNNEMTIDNLFKHKAEIIVIKHGVEGSFAYTKAGETFR--AQAYKTKVLKTFGAGDSYASAFLYGLFSGENI-------ETALKFGSAAASIVVSKHSSSDAMPTADE 316          
BLAST of DR406162 vs. ExPASy Swiss-Prot
Match: RBSK_HAEIN (Ribokinase OS=Haemophilus influenzae GN=rbsK PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.712e-15
Identity = 62/249 (24.90%), Postives = 112/249 (44.98%), Query Frame = 1
Query:   16 ENGVSADGINFDQGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEA-REQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESAL---SLWHPN-LKLLLVTLGEHGCRYYTKSFRGAVDAFHVNAVDTTGAGDAFVGTLLGKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPALPTESEALNY 747
            + G+    IN      T +AF+ +    E   +     ++ +             S  V       +    C    LE   +  E  A ++    +++ L P+P +   ++++S+ D   +I  ++ E E LTG +  D++SA+   S++H   ++ +++TLG  G     K     +  F V A+DTT AGD F G  +  L++++S         E ++F  A  AI+ TKKGA  ++PT  E L +
Sbjct:   77 QEGIDTTHINTVSQEMTGMAFIQVAKSSENSIVLASGANSHL-------------SEMVVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLNPAPAQILSDELLSLID---IITPNETEAEILTGVEVADEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRIIKGFCVQAIDTTAAGDTFNGGFVTALLEEKS-------FDEAIRFGQAAAAISVTKKGAQSSIPTRQETLEF 302          
The following BLAST results are available for this feature:
BLAST of DR406162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
Y1459_PYRHO1.720e-2029.55Uncharacterized sugar kinase PH1459 OS=Pyrococcus ... [more]
IOLC_BACSK1.363e-1727.535-dehydro-2-deoxygluconokinase OS=Bacillus clausii... [more]
IOLC_LISMO3.037e-1724.495-dehydro-2-deoxygluconokinase OS=Listeria monocyt... [more]
IOLC_BACHD5.180e-1726.645-dehydro-2-deoxygluconokinase OS=Bacillus halodur... [more]
IOLC_GEOKA1.507e-1626.835-dehydro-2-deoxygluconokinase OS=Geobacillus kaus... [more]
IOLC_LISMH9.769e-1623.675-dehydro-2-deoxygluconokinase OS=Listeria monocyt... [more]
IOLC_LISMF1.276e-1523.675-dehydro-2-deoxygluconokinase OS=Listeria monocyt... [more]
IOLC_LISMC1.276e-1523.675-dehydro-2-deoxygluconokinase OS=Listeria monocyt... [more]
IOLC_LISIN1.276e-1523.895-dehydro-2-deoxygluconokinase OS=Listeria innocua... [more]
RBSK_HAEIN3.712e-1524.90Ribokinase OS=Haemophilus influenzae GN=rbsK PE=3 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248O19 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248O19 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406162 ID=DR406162; Name=DR406162; organism=Citrus sinensis; type=EST; length=749bp
GGGGGGATCTTGAAGGAGAACGGAGTCAGCGCTGACGGCATCAACTTTGA
CCAGGGTGCCAGAACTGCCCTTGCATTCGTGACCCTGCGGGCTGACGGCG
AGCGCGAGTTCATGTTTTACAGAAACCCCAGCGCTGATATGCTCTTGAGA
CCCGACGAGCTTAATCTTGAGCTGATCAGATCTGCCAAAGTTTTCCACTA
TGGGTCAATAAGCCTGATAGTGGAGCCATGCCGATCAGCGCACTTGGAGG
CAATGAAAGCAGCCAAGGAAGCAGGAGCCCTTCTCTCATACGACCCCAAC
CTCCGGCTACCGTTGTGGCCCTCGCCGGAGGAGGCGCGCGAGCAGATAAT
GAGCATCTGGGACAAGGCCGAGGTAATCAAAGTCAGTGATGTGGAGCTTG
AATTCCTCACCGGGAGTGACAAGATTGATGATGAATCAGCATTGTCGCTT
TGGCATCCCAACTTGAAACTCCTTTTGGTCACCCTTGGTGAGCATGGCTG
CAGATACTACACCAAGAGTTTCAGAGGAGCAGTGGATGCTTTTCATGTGA
ACGCAGTAGATACAACCGGCGCTGGTGATGCATTTGTTGGTACTCTTTTA
GGGAAGCTTGTTGATGACCAATCTGTTCTTGAGGATGAACCAAGGTTGCG
GGAGATATTGAAATTTGCAAATGCCTGTGGAGCCATCACTACCACCAAGA
AGGGAGCAATTCCAGCTCTACCCACAGAGTCTGAAGCTCTCAACTACTC
back to top