DR406141

Overview
NameDR406141
Unique NameDR406141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR406141_ssr733 microsatellite DR406141_ssr733:733..744. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5704 contig Csv1_Contig5704:54..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.169e-48
Identity = 104/214 (48.60%), Postives = 135/214 (63.08%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIY-NGDCSNDPYYIDHAVLIVGY---GSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYG 633
            E P S+DWR++G VTPVK+QG CGSCW+FS TGA+EG     TG L+SLSEQ LVDC     + GC+GG MD AF +V +NGG+D+E  YPY G D  TCN  K E    +  G+ D+   + AL+ A A   PISV +      FQ Y SGIY + DCS+    +DH VL+VGY   G+++   +WIVKNSWG  WG +GY  + +D +   G
Sbjct:  113 EIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNY-KPECSAANDTGFVDLPQREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKD--LDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCG 323          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 193.356 bits (490), Expect = 1.169e-48
Identity = 102/215 (47.44%), Postives = 134/215 (62.33%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSE----NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYG 633
            + P S+DW K+G VTPVK+QG CGSCW+FS TGA+EG     TG L+SLSEQ LVDC     + GC+GG MD AF+++ +NGG+D+E  YPY   D  +CN  K E    +  G+ D+   + AL+ A A   PISV +    + FQ Y SGI Y+ DCS+    +DH VL+VGYG E    N   +WIVKNSWG  WG +GY  + +D +   G
Sbjct:  113 DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNY-KPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKD--LDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCG 324          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.604e-48
Identity = 95/197 (48.22%), Postives = 124/197 (62.94%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD--TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYF 600
            P + DWR+ GIV+PVK+QG CGSCW+FSTTGA+E      TG  ISLSEQ+LVDC     ++GC+GG    AFE++  NGG+DTE  YPY GV+G C    E   V  +D       ++  L  A  + +P+SV      + F+LY SG+Y  D C   P  ++HAVL VGYG E+G  YW++KNSWG  WG +GYF
Sbjct:  144 PETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVRPVSVAF-EVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYF 339          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.401e-48
Identity = 101/218 (46.33%), Postives = 128/218 (58.72%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYK-DVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGK--CAINAMA 657
            P + DWR+ GIV+PVK+Q  CGSCW+FSTTGA+E      TG  ISLSEQ+LVDC     ++GC+GG    AFE++  NGGIDTE  YPY GV+G C+   E   V  +D     +   D       + +P+SV        F+ Y SG+Y  D C   P  ++HAVL VGYG ENG  YW++KNSWG  WG +GYF       +E GK  CAI   A
Sbjct:  145 PETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAF-QVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYF------KMEMGKNMCAIATCA 355          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.801e-48
Identity = 96/201 (47.76%), Postives = 133/201 (66.17%), Query Frame = 1
Query:   25 SSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL-CAAVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD 615
            + +DWR + +VTPVKDQ  CGSCW+FS TGA+EG + L   +L+SLSEQ+LVDC T   + GC GG+M  AF+++ +NGGIDTES YPY   D +C         +   G  +V+ ++ AL    +   PISV +  S   FQ Y+SG+ Y  +CS  P ++DH VL VGYG+E+ +DYW+VKNSWG+SWG  GY  ++R+
Sbjct:  108 ADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAI-CTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCS--PTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRN 305          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.576e-48
Identity = 97/209 (46.41%), Postives = 127/209 (60.77%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEP-SDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            P  +DWR++G VTPVK+QGSCGSCW+FS    IEGI  + TG+L   SEQEL+DCD  SYGC+GGY   A + ++   GI   + YPY GV   C   ++       DG + V+P ++ ALL +   QP+SV +  +  DFQLY  GI+ G C N    +DHAV  VGY    G +Y ++KNSWGT WG +GY  I R T   YG C +
Sbjct:  135 PEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRRSYGCNGGYPWSALQ-LVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNK---VDHAVAAVGY----GPNYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGL 335          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.894e-48
Identity = 101/209 (48.33%), Postives = 128/209 (61.24%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSE-NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYG 633
            P S+DW K+G VTPVK+QG CGSCW+FS TGA+EG     TG L+SLSEQ LVD      + GC+GG MD AF+++  NGG+D+E  YPY   D +CN  K E       G+ D+   + AL+ A A   PISV +    S FQ Y SGI Y+ DCS+    +DH VL+VGYG E     +WIVKNSWG  WG  GY  + +D +   G
Sbjct:    2 PKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATDTSCNY-KPEYSAAKDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKD--LDHGVLVVGYGFEGTNNKFWIVKNSWGPEWGNKGYVKMAKDQNNHCG 207          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.292e-47
Identity = 101/215 (46.98%), Postives = 133/215 (61.86%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSE----NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYG 633
            + P S+DW K+G VTPVK+QG CGSCW+FS TGA+EG     TG L+SLSEQ LVDC     + GC+GG MD AF+++ +NG +D+E  YPY   D  +CN  K E    +  G+ D+   + AL+ A A   PISV +    + FQ Y SGI Y+ DCS+    +DH VL+VGYG E    N   +WIVKNSWG  WG +GY  + +D +   G
Sbjct:  113 DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCNY-KPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKD--LDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCG 324          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.292e-47
Identity = 97/218 (44.50%), Postives = 139/218 (63.76%), Query Frame = 1
Query:   22 PSSLDWRKRG-IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV--QQPISVGMVGSASDFQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            PSS+DWRK+G +V+PVK+QG+CGSCW+FSTTGA+E   A+ +G +++L+EQ+LVDC  +  ++GC GG    AFE+++ N GI  E  YPY G +G C    E+  V  +    ++  +D A +  AV    P+S        DF +Y SG+Y+ + C   P  ++HAVL VGYG +NG  YWIVKNSWG++WG +GYF I R  ++    C + A A
Sbjct:  115 PSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPEKA-VAFVKNVVNITLNDEAAMVEAVALYNPVSFAF-EVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERGKNM----CGLAACA 326          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.204e-47
Identity = 101/224 (45.09%), Postives = 131/224 (58.48%), Query Frame = 1
Query:    4 VQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYK-DVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIY-NGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGK--CAINAMA 657
            V     P + DWR+ GIV+PVKDQG CGSCW+FSTTGA+E       G  ISLSEQ+LVDC     +YGC+GG    AFE++ +NGG+DTE  YPYTG D TC  + E   V  ++     +   D       + +P+S+      S F+LY SG+Y +  C + P  ++HAVL VGYG E+G  YW++KNSWG  WG  GYF       +E GK  C I   A
Sbjct:  136 VTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDETCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVRPVSIAFEVIHS-FRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYF------KMEMGKNMCGIATCA 352          
The following BLAST results are available for this feature:
BLAST of DR406141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CATL1_CANFA1.169e-4848.60Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATL1_BOVIN1.169e-4847.44Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CYSP2_MAIZE2.604e-4848.22Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
ALEU_HORVU3.401e-4846.33Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP3_HOMAM5.801e-4847.76Digestive cysteine proteinase 3 OS=Homarus america... [more]
PAPA1_CARPA7.576e-4846.41Papain OS=Carica papaya PE=1 SV=1[more]
CATL1_SHEEP9.894e-4848.33Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CATL2_BOVIN1.292e-4746.98Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATH_RAT1.292e-4744.50Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
ALEU_ARATH2.204e-4745.09Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248N22 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248N22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406141 ID=DR406141; Name=DR406141; organism=Citrus sinensis; type=EST; length=758bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGT
TCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGAC
CTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTA
TGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACA
ACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGGT
ACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTA
TAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAAC
AACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATAT
ACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTGA
TCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTATT
GGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTTT
TACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATGC
TATGGCTTCTTATCCAATCGAAGAATCCTATGCACCATCTCCCTATTCAC
CACCATCCGAGCCACCCCCGCTACCGTCACCGCCACCACCACCACCTCCA
TCTCCATC
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