DR406106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: ARAE1_ARATH (UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.928e-33 Identity = 74/167 (44.31%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 168 NILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS 668 ++LVTGGAGYIGSH L+LL Y+ +VDNL + AV ++EL G + F DL D A+ +F + F AV+HFA + VGES Q PL Y+ N T+ +LE MAAHG K L++SS+ YG P ++P TEE P +NPYG+ K E+I D ++ Sbjct: 72 HVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPG-RLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKN 237
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: GALE_PASHA (UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.296e-33 Identity = 73/163 (44.79%), Postives = 109/163 (66.87%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRD 656 ILVTGGAGYIGSHT+++LL + VV+DNL N+SE+++ +VK++ G ++ F++ D+ D+ L +FA+ + +VIHFAGL+AVGE+ + + NN+ G+I L+E M +VFSSSATVYG P+++P E P+ NPYG +K +E I D Sbjct: 3 ILVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERVKQITGK---SVKFYQGDILDRDILRKIFAENQIESVIHFAGLKAVGETSENRYVTIKNNVTGSIVLVEEMLKANVNTIVFSSSATVYGDPQIIPIVESCPVGGTTNPYGTSKYMVERILED 162
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: ARAE2_ARATH (Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana GN=At2g34850 PE=2 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32 Identity = 73/167 (43.71%), Postives = 102/167 (61.08%), Query Frame = 3 Query: 168 NILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS 668 ++LVTGGAGYIGSH L+LL Y+ +VDNL + AV +++L G + F DL D A+ +F++ F AV+HFA + VGES Q PL Y+ N T+ +LE MAAHG K L++SS+ YG P+ +P TEE P +NPYG+ K E+I D ++ Sbjct: 71 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKILQQLFPEPG-KLQFIYADLGDANAVNKIFSENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHGVKTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDFSKN 236
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: GALE_BACHD (UDP-glucose 4-epimerase OS=Bacillus halodurans GN=galE PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31 Identity = 75/159 (47.17%), Postives = 96/159 (60.38%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEI 647 ILVTGGAGYIGSHTVL LL G + +V+DNL A++ V TF+ D+RD L+ +F VIHFA VGESV++P+ Y++NN+IGT TLL+ M H K +VFSS+A YG P +P E P NPYG TKL IE++ Sbjct: 3 ILVTGGAGYIGSHTVLFLLEQGEQVIVLDNLQKGHAGALSDV-----------TFYHGDIRDDQLLDTIFTTHSIDTVIHFAANSLVGESVKQPIEYYENNVIGTHTLLKKMLEHDVKKIVFSSTAATYGEPVQIPIQESDPTIPTNPYGETKLAIEKM 150
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: ARAE2_ORYSJ (Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UEL-2 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.858e-31 Identity = 70/163 (42.94%), Postives = 97/163 (59.51%), Query Frame = 3 Query: 168 NILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRD 656 ++LVTGGAGYIGSH L+LL Y+ +VDNL + AV ++ L G + F DL D A+ +F++ F AV+HFA + VGES +PL Y+ N T+T+LE MAA+ K L++SS+ YG P +P TE P +NPYG+ K E+I D Sbjct: 51 HVLVTGGAGYIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPG-RLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKTLIYSSTCATYGEPDTMPITEATPQNPINPYGKAKKMAEDIILD 212
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: ARAE1_ORYSJ (Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UEL-1 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.170e-30 Identity = 69/167 (41.32%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 168 NILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS 668 ++LVTGGAGYIGSH L+LL ++ +VDNL + A+ ++ L G + F DL D A+ +FA+ F AV+HFA + VGES +PL Y+ N T+ +LE MAAH + L++SS+ YG P+ +P TE P +NPYG+ K E+I D +S Sbjct: 74 HVLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLFSEPG-RLQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHNVRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKS 239
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: EXOB_RHIME (UDP-glucose 4-epimerase OS=Rhizobium meliloti GN=exoB PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.606e-30 Identity = 74/163 (45.40%), Postives = 92/163 (56.44%), Query Frame = 3 Query: 168 NILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRD 656 NILV GGAGYIGSHT LQL GY+ VV DNL N E V K D+RD+ L+ + A+ K A++HFA + VGESV+ P ++DNN+IGT+TLL A G VFSS+ YG P VP E +NPYGRTK E+ +D Sbjct: 5 NILVVGGAGYIGSHTCLQLAAKGYQPVVYDNLSNGHEEFVKWG-----------VLEKGDIRDRQRLDEVLARHKPRAILHFAAMIEVGESVKDPAAFYDNNVIGTLTLLSAALAAGIDAFVFSSTCATYGLPDSVPMDESHKQAPINPYGRTKWICEQALKD 156
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: ARAE4_ARATH (Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana GN=At5g44480 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.606e-30 Identity = 69/167 (41.32%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 168 NILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS 668 ++LVTGGAGYIGSH L+LL Y+ +VDNL + AV +++L G + F DL D A+E +F++ F AV+HFA + VGES PL Y+ N T+ +LE MA H K L++SS+ YG P+ +P TE+ P +NPYG+ K E++ D ++ Sbjct: 96 HVLVTGGAGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTG-RLQFIYADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKVKKLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMAEDMILDFSKN 261
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: GALE_KLEPN (UDP-glucose 4-epimerase (Fragment) OS=Klebsiella pneumoniae GN=galE PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.583e-30 Identity = 68/139 (48.92%), Postives = 93/139 (66.91%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTE 587 +LVTGG+GYIGSHT +QLL G++ V++DNL N+ + ++ L G + TF + D+R++A + + AVIHFAGL+AVGESV KPL Y+DNN+ GT+ L+ M A G KN +FSSSATVYG +P E Sbjct: 3 VLVTGGSGYIGSHTCVQLLQRGHEVVILDNLCNSKRRILPVIERLGGKEA---TFIEGDIRNEARMTEILHDHAIEAVIHFAGLKAVGESVAKPLEYYDNNVTGTLKLVSAMRAAGVKNFIFSSSATVYGDQPKIPYVE 138
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: ARAE3_ORYSJ (Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UEL-3 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.583e-30 Identity = 69/163 (42.33%), Postives = 97/163 (59.51%), Query Frame = 3 Query: 168 NILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRD 656 ++LVTGGAGYIGSH L+LL Y+ +VDNL + AV ++EL G + F DL D+ + +FA+ F AV+HFA + VGES +PL Y+ N T+ +LE MA+HG K L++SS+ YG P+ +P E +NPYG+ K E+I D Sbjct: 65 HVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPG-RLQFIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHGVKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILD 226 The following BLAST results are available for this feature:
BLAST of DR406106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DR406106 ID=DR406106; Name=DR406106; organism=Citrus sinensis; type=EST; length=678bpback to top |