DR406106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: EXOB_AZOBR (UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.173e-22 Identity = 63/162 (38.89%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRD 656 +LVTGGAGYIGSH + L G V +D+L A+ L D+ L+ + + AV+HFAG V ESV KPL Y+ NN ++TLL G +VFSS+A VYG P+ VP E+ P +NPYG +KL E++ RD Sbjct: 11 VLVTGGAGYIGSHVLHALTDAGIPAVTIDDLSAGRREAIPAAVPLVEG----------DIGSAELLDRVMRDHRVDAVMHFAGSIVVPESVVKPLDYYRNNTANSLTLLGACLRAGIDKVVFSSTAAVYGAPESVPIREDAPTVPINPYGASKLMTEQMLRD 162
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.288e-18 Identity = 60/166 (36.14%), Postives = 86/166 (51.81%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSS-ATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHR 665 ILVTGGAG+IGSH V +L+ Y +++DNL ++ N F D+RDK E + K VIH A V SV+ P+ D N++GTI +LE+M + +VF+SS VYG P +P E P+ ++PYG +K EE + +R Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNYDVIILDNLTTGNK----------NNINPKAEFVNADIRDKDLDEKINFK-DVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDENHPINPLSPYGLSKYVGEEYIKLYNR 156
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: GALE_MYCPN (UDP-glucose 4-epimerase OS=Mycoplasma pneumoniae GN=galE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.797e-16 Identity = 62/171 (36.26%), Postives = 88/171 (51.46%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLD-NASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVM-AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLE---AMNPYGRTKLFIEEICRDVHRS 668 +LV GG GYIGS + QLL Y V V +D N + +A+ + + H ++L D+A L A+ V HFA +V ES ++PL YFD+NL+GT+ LL + L FSS+A V+G +P E LE A NPYG +K E + + + RS Sbjct: 8 VLVLGGLGYIGSCFIDQLLKQ-YPDVTVSVIDINHTSLALQLLPR-------QVNVHFVNLLDRAQLTDTIAQINPDVVFHFAAKTSVKESTEQPLTYFDHNLVGTLNLLHALKELQKPIQLFFSSTAAVFGSASTLPIPENLVLEETLASNPYGISKFLSEIVLQTLTRS 170
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: YCL2_ECO11 (Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia coli O111:H- PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 52/154 (33.77%), Postives = 87/154 (56.49%), Query Frame = 3 Query: 174 LVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVK-ELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVP-CTEEFPLEAMNPYGRTK 629 LVTG AG+IG H +LL G++ V +DNL++ ++++ + + EL G FHK+DL D+ + LFA F V AV S++ P Y D+NL G + +LE + ++L+++SS++VYG + +P T++ ++ Y TK Sbjct: 4 LVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPG--FQFHKIDLADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCRHNKIQHLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATK 155
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: TGDS_DICDI (dTDP-D-glucose 4,6-dehydratase OS=Dictyostelium discoideum GN=tgds PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.999e-15 Identity = 58/187 (31.02%), Postives = 87/187 (46.52%), Query Frame = 3 Query: 153 DSMAKNILVTGGAGYIGSHTVLQLL--LGGYKTVVVDNLDNASEI--AVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKV-----------VPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS 668 D + IL+TGGAG+IGSH + L K +V+D LD S I +KEL N F+K ++ D LE +F K K VIH A V S ++ + + +NN++GT LLE + K ++ S+ VYG + E+ L NPY +K E + + ++S Sbjct: 6 DLFIQKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKEL------NFKFYKGNILDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCKNYKLKKFIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKS 186
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: CAPI_STAAU (Protein capI OS=Staphylococcus aureus GN=capI PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14 Identity = 41/130 (31.54%), Postives = 75/130 (57.69%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYG 560 IL+TG AG+IGSH +L+ G+ + VD++++ +++ K L +N TF+K+ L + L +F + V++ A V S++ P Y D+N++G + +LE +NL+++SS++VYG Sbjct: 3 ILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSL-KEDRLKSIGKENFTFNKVKLENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQNLIYASSSSVYG 131
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.781e-13 Identity = 48/146 (32.88%), Postives = 77/146 (52.74%), Query Frame = 3 Query: 165 KNILVTGGAGYIGSHTVLQLLLGGY---KTVVVDNLDNA-SEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEE 590 KNILVTG AG+IG H + + L+ Y K + +DNL+N + + K E+ N +N TF KLD D L + ++H V S+Q P Y +N +GT+ + E + +V++SS++VYG + +P +E+ Sbjct: 4 KNILVTGSAGFIGFH-LSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNY-ENYTFIKLDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRFDIEKVVYASSSSVYGGNRKIPFSED 147
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: GALE_MYCGE (UDP-glucose 4-epimerase OS=Mycoplasma genitalium GN=galE PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.449e-13 Identity = 56/173 (32.37%), Postives = 86/173 (49.71%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMA-AHGCKNLVFSSSATVYGWPKVVPCTEEFPL---EAMNPYGRTKLFIEEICRDVHRSDSE 677 + + GG GYIGS + ++V +DN V K+ + G + F+ DL D+ L + A + V HFA +V ESV PL YFD N+IGT+ L+ ++ L F+SSA VYG +EE + +A NPYG +K F++E+ + +S+ Sbjct: 8 VAIVGGIGYIGS-CFASFIKEQNDKLIVTVIDNNKNNHVIKLLKKIG-----IEFYFADLLDRHKLTEVIAAIQPDVVFHFAAKTSVSESVHNPLKYFDCNVIGTLNLISAISNLQKPIKLFFASSAAVYGQTTNSYISEEIVITETQATNPYGLSK-FLDELILNAVAKNSQ 173
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: TGDS_BOVIN (dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.423e-13 Identity = 52/167 (31.14%), Postives = 76/167 (45.51%), Query Frame = 3 Query: 141 VSPLDSMAKNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIE 641 + P DS AK +LVTGGAG+I SH ++ L+ Y ++ NLD A K E N+ N F + D+ D ++ LF K V+HFA V S + + N+ GT L+ + ++ S+ VYG E P + NPY +K E Sbjct: 10 LGPPDSFAKRVLVTGGAGFIASHMIVS-LVEDYPNYMIINLDKLDYCASLKNLETISNK-QNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAE 174
BLAST of DR406106 vs. ExPASy Swiss-Prot
Match: TGDS_MOUSE (dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.437e-12 Identity = 52/165 (31.52%), Postives = 75/165 (45.45%), Query Frame = 3 Query: 147 PLDSMAKNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIE 641 P S AK +LVTGGAG+I SH ++ L+ Y ++ NLD A K E N+ N F + D+ D ++ LF K V+HFA V S + + N+ GT L+ G + ++ S+ VYG E P + NPY +K E Sbjct: 12 PPGSFAKRVLVTGGAGFIASHVIVSLV-EDYPDYMIVNLDKLDYCASLKNLEPVSNK-QNYKFIQGDICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFIYVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAE 174 The following BLAST results are available for this feature:
BLAST of DR406106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DR406106 ID=DR406106; Name=DR406106; organism=Citrus sinensis; type=EST; length=678bpback to top |