DR406102
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR406102 vs. ExPASy Swiss-Prot
Match: RLA0_RANSY (60S acidic ribosomal protein P0 OS=Rana sylvatica GN=RPLP0 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.270e-36 Identity = 79/161 (49.07%), Postives = 103/161 (63.98%), Query Frame = 3 Query: 204 KASKAEKKIAYDAKLCQLLEEYTQILVAATDNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI 686 + +A K Y K+ QLL++Y + + DNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N+A L+P ++GNVG +FTK DL A AR G +AP DV VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NSALEKLLPHIKGNVGFVFTKEDLAEVRDMLLANKVPASARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161
BLAST of DR406102 vs. ExPASy Swiss-Prot
Match: RLA0_CHICK (60S acidic ribosomal protein P0 OS=Gallus gallus GN=RPLP0 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.495e-36 Identity = 80/161 (49.69%), Postives = 102/161 (63.35%), Query Frame = 3 Query: 204 KASKAEKKIAYDAKLCQLLEEYTQILVAATDNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI 686 + +A K Y K+ QLL++Y + V DNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP DV VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI Sbjct: 3 REDRATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161
BLAST of DR406102 vs. ExPASy Swiss-Prot
Match: RLA0_NEUCR (60S acidic ribosomal protein P0 OS=Neurospora crassa GN=crpp0 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35 Identity = 73/158 (46.20%), Postives = 101/158 (63.92%), Query Frame = 3 Query: 213 KAEKKIAYDAKLCQLLEEYTQILVAATDNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI 686 K+ K Y KL LLE+Y I + + DNV S Q+ IR+ LRG++VVLMGKNTM++R ++ T + L+P ++GNVG +FT GDL APAR G +AP DV +P GNTG++P +TSFFQ L +PTKI +GT+EI T ++L+ Sbjct: 4 KSANKAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVADTPE--YERLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLV 159
BLAST of DR406102 vs. ExPASy Swiss-Prot
Match: RLA0_RAT (60S acidic ribosomal protein P0 OS=Rattus norvegicus GN=Rplp0 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.608e-35 Identity = 78/161 (48.45%), Postives = 102/161 (63.35%), Query Frame = 3 Query: 204 KASKAEKKIAYDAKLCQLLEEYTQILVAATDNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI 686 + +A K Y K+ QLL++Y + + DNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161
BLAST of DR406102 vs. ExPASy Swiss-Prot
Match: RLA0_PIG (60S acidic ribosomal protein P0 OS=Sus scrofa GN=RPLP0 PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.608e-35 Identity = 78/161 (48.45%), Postives = 102/161 (63.35%), Query Frame = 3 Query: 204 KASKAEKKIAYDAKLCQLLEEYTQILVAATDNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI 686 + +A K Y K+ QLL++Y + + DNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161
BLAST of DR406102 vs. ExPASy Swiss-Prot
Match: RLA0_MOUSE (60S acidic ribosomal protein P0 OS=Mus musculus GN=Rplp0 PE=1 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 3.608e-35 Identity = 78/161 (48.45%), Postives = 102/161 (63.35%), Query Frame = 3 Query: 204 KASKAEKKIAYDAKLCQLLEEYTQILVAATDNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI 686 + +A K Y K+ QLL++Y + + DNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161
BLAST of DR406102 vs. ExPASy Swiss-Prot
Match: RLA0_HUMAN (60S acidic ribosomal protein P0 OS=Homo sapiens GN=RPLP0 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.608e-35 Identity = 78/161 (48.45%), Postives = 102/161 (63.35%), Query Frame = 3 Query: 204 KASKAEKKIAYDAKLCQLLEEYTQILVAATDNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI 686 + +A K Y K+ QLL++Y + + DNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161
BLAST of DR406102 vs. ExPASy Swiss-Prot
Match: RLA0_BOVIN (60S acidic ribosomal protein P0 OS=Bos taurus GN=RPLP0 PE=2 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 3.608e-35 Identity = 78/161 (48.45%), Postives = 102/161 (63.35%), Query Frame = 3 Query: 204 KASKAEKKIAYDAKLCQLLEEYTQILVAATDNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI 686 + +A K Y K+ QLL++Y + + DNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161
BLAST of DR406102 vs. ExPASy Swiss-Prot
Match: RLA0_CAEEL (60S acidic ribosomal protein P0 OS=Caenorhabditis elegans GN=rpa-0 PE=1 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 6.155e-35 Identity = 75/163 (46.01%), Postives = 103/163 (63.19%), Query Frame = 3 Query: 198 VVKASKAEKKIAYDAKLCQLLEEYTQILVAATDNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI 686 +V+ ++ K Y KL +L EEY + L+ DNVGS Q+Q IR+ +RG + +LMGKNTM+++ +R H K N + L+P + NVG +FTK DL GAPA+ G +AP DV +PP NTG+ P +TSFFQ L IPTKI +GT+EI+ V LI Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGK--NPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLI 161
BLAST of DR406102 vs. ExPASy Swiss-Prot
Match: RLA0_ICTPU (60S acidic ribosomal protein P0 OS=Ictalurus punctatus GN=rplp0 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.050e-34 Identity = 77/161 (47.83%), Postives = 101/161 (62.73%), Query Frame = 3 Query: 204 KASKAEKKIAYDAKLCQLLEEYTQILVAATDNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI 686 + +A K Y K+ QLL +Y + + DNVGS Q+Q IR LRG ++VLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI Sbjct: 3 REDRATWKSNYFLKIIQLLNDYPKCFIVGADNVGSKQMQTIRLSLRGKAIVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLPEVRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 The following BLAST results are available for this feature:
BLAST of DR406102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >DR406102 ID=DR406102; Name=DR406102; organism=Citrus sinensis; type=EST; length=686bpback to top |