DR406094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.916e-24 Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 1 Query: 232 LRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 627 ++++ SKR++KEL +L SA P +++F W TI GP ++ ++G + +S+ FP YP+ P V F T FHPN++ G+ICLDILK++WS + +LLSI SLL +PN + PL + A M+ Sbjct: 27 VKDNHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMW 158
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.502e-24 Identity = 55/130 (42.31%), Postives = 82/130 (63.08%), Query Frame = 1 Query: 253 SKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 630 + R+ KEL L +PP + D + +A I+G +++P+ GVF + + P YPF+PP+V F T ++HPNI+S+G ICLDIL K W P+L I+ VL SI L+ +PNPDDPL+ +I+ +K Sbjct: 4 ASRLKKELHMLAIEPPPGITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFK 133
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 2.502e-24 Identity = 50/139 (35.97%), Postives = 83/139 (59.71%), Query Frame = 1 Query: 262 INKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 + ++L +L K+P SAG + D D++ W+ I+GP D+ + GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ D Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWRED 148
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 2.502e-24 Identity = 50/139 (35.97%), Postives = 83/139 (59.71%), Query Frame = 1 Query: 262 INKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 + ++L +L K+P SAG + D D++ W+ I+GP D+ + GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ D Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWRED 148
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 2.502e-24 Identity = 50/139 (35.97%), Postives = 83/139 (59.71%), Query Frame = 1 Query: 262 INKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 + ++L +L K+P SAG + D D++ W+ I+GP D+ + GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ D Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWRED 148
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.268e-24 Identity = 52/130 (40.00%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 253 SKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 630 + R+ +EL L +PP + D M +A I+G +++P+ GVF + +H P YPF+PP++ F T ++HPNI+S G ICLD+L K W P+L I+ +L I L+ +PNPDDPL+ +I+ +K Sbjct: 4 TSRLKRELSLLAAEPPPGITCWQDGDRMEDLRAQILGGANTPYEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFK 133
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.268e-24 Identity = 50/139 (35.97%), Postives = 82/139 (58.99%), Query Frame = 1 Query: 262 INKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE-------------QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 + ++L +L K+P SAG + D D++ W+ I+GP D+ + GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL E +W P T+ +++S+ S+L DPN D P + A ++ D Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWRED 148
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.574e-24 Identity = 56/130 (43.08%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 238 NSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 627 +S KR+ EL L SA P D++F W+ TI G D+ F G + +S+ F DYPFK PKV F T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++ Sbjct: 33 DSHSVLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW 162
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.281e-24 Identity = 53/130 (40.77%), Postives = 82/130 (63.08%), Query Frame = 1 Query: 253 SKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 630 + R+ +EL L +PP + D M +A I+G +++P+ GVF + + P YPF+PP++ F T ++HPNI+S G ICLD+L K W P+L I+ VL SI L+++PNPDDPL+ +I+ +K Sbjct: 4 ASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFK 133
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 7.281e-24 Identity = 52/144 (36.11%), Postives = 81/144 (56.25%), Query Frame = 1 Query: 247 MASKRINKELKDLQKDPPASCSAGPV-ADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 MA +R+ KE K+L ++ P +AGP DD F W I GP +PF GG++ ++ FP DYP PP + F + FHPN+ +G++C+ IL E+WSP ++ K+LLS+ S+L +PN + + M++ D Sbjct: 5 MALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWRED 148 The following BLAST results are available for this feature:
BLAST of DR406094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
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Sequences
The
following sequences are available for this feature:
EST sequence >DR406094 ID=DR406094; Name=DR406094; organism=Citrus sinensis; type=EST; length=637bpback to top |