DR406094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2W_DICDI (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.278e-16 Identity = 47/110 (42.73%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 253 SKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF-RTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 579 +KR+ KEL DL+ +PP C + D++ W + G S + G F + F YP P+V F T HP+I SNG ICL IL + WSPALT+S V LSI S+L+ Sbjct: 6 AKRLQKELLDLKTNPPP-CISITEGDNLDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSPEVIFIGTPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSMLS 114
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.278e-16 Identity = 43/124 (34.68%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 250 ASKRINKELKDLQKDPPASCS-AGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 618 A RI K++ DL+ S S P+ ++ H + + P + + GG F I +YP PPKV K++HPNI+ G++CL+IL++ W+P L ++ +L+ + L PN +DPL E A Sbjct: 24 AQIRIQKDVTDLEIPSTMSTSWPDPIKLNVLHLE---IRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAA 144
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe GN=ubc8 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.587e-16 Identity = 38/101 (37.62%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 322 VADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIA 618 V D+M + GPS++P++GG++ V + P +YP+K P + F ++FHPNI+ +GS+CLD++ + WSP + + + + LL PN DPL E A Sbjct: 25 VNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAA 125
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.587e-16 Identity = 44/139 (31.65%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 220 SDGLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQA----TIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM 624 S + N A R+ ++L L P + + D Q+ I+ P + + G ++ F YP +PPKV K+FHPNI+ G++CL+IL+E WSPAL + ++ + L +PNP+DPL + A + Sbjct: 18 SSSIQPNLSAARIRLKRDLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKL 156
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UB2L6_RAT (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Rattus norvegicus GN=Ube2l6 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.297e-16 Identity = 46/131 (35.11%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 250 ASKRINKELKDLQKD-PPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 ASKR+ KEL DL K+ PP ++ W ++ P P+ F + I FP +YP KPP + F TK++HPNI+ +G +CL ++ E W P +VL ++ L++ PN ++P+ E+A + D Sbjct: 3 ASKRVAKELDDLSKELPPYLRHLSSDDANVLVWHMLLL-PDQLPYRLKAFGLRIDFPREYPLKPPTLRFTTKIYHPNISEDGLVCLPLISTENWKPYTKAYQVLEALNILVSRPNLEEPVRLELADLLTQD 132
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.245e-15 Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 247 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKTD 636 M+S +E+ DL K + + D M + GP DS + GGV+ V + YP+K P + F K++HPN++ +GS+CLD++ + WSP + + + + LL PNP DPL E A + D Sbjct: 1 MSSPSKRREM-DLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRD 131
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2H_MOUSE (Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.123e-15 Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 361 GPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMY 627 GP +P+ GGV+ V + P YPFK P + F K+FHPNI+ ++G++CLD++ + W+ ++ + S + LL PNP DPL + A MY Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMY 130
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2H_HUMAN (Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.123e-15 Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 361 GPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMY 627 GP +P+ GGV+ V + P YPFK P + F K+FHPNI+ ++G++CLD++ + W+ ++ + S + LL PNP DPL + A MY Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMY 130
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2H_BOVIN (Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.123e-15 Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 361 GPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMY 627 GP +P+ GGV+ V + P YPFK P + F K+FHPNI+ ++G++CLD++ + W+ ++ + S + LL PNP DPL + A MY Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMY 130
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.123e-15 Identity = 40/114 (35.09%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 579 +++A+ R+ KE + Q +PP+ V+D++ W + G + +A + + + FP YP + P+V F+ HP+I SNG ICLD+L + WSPA+ +S + LSI S+L+ Sbjct: 13 TKIATNRLQKEFMEWQTNPPSGFKHR-VSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLS 125 The following BLAST results are available for this feature:
BLAST of DR406094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
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Sequences
The
following sequences are available for this feature:
EST sequence >DR406094 ID=DR406094; Name=DR406094; organism=Citrus sinensis; type=EST; length=637bpback to top |