DR406094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2F_DANRE (NEDD8-conjugating enzyme UBE2F OS=Danio rerio GN=ube2f PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.987e-13 Identity = 46/131 (35.11%), Postives = 68/131 (51.91%), Query Frame = 1 Query: 268 KELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTD 636 KE+ +L+ + P++C P + + H+Q I P + + GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL + A + D Sbjct: 39 KEVAELEANLPSTCKVTFPDENKLCHFQLAI-SPDEGYYLGGKFQFEIEVPEAYNMVPPKVKCLTRIWHPNIAETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIDAAEHHLRD 168
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC12_KLULA (NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis GN=UBC12 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.987e-13 Identity = 31/85 (36.47%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 364 PSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 618 P +AGG + ++ YP +PP V +++HPNI+ +G++CL++L+E W+PAL I +++ I L +PN DPL + A Sbjct: 67 PDIGYYAGGTYYFNVFIKDTYPMEPPVVKCMHRIYHPNIDIDGNVCLNLLREDWTPALDIQSIIIGILFLFHEPNGRDPLNKDAA 151
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBCX_PICPA (Ubiquitin-conjugating enzyme E2-24 kDa OS=Pichia pastoris GN=PEX4 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.390e-13 Identity = 52/174 (29.89%), Postives = 79/174 (45.40%), Query Frame = 1 Query: 250 ASKRINKELKDLQKDPPASCSAG-----------PVADDMFH-WQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRT----------------------------------KVFHPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 630 A KR+ +E + + K+ SA PV++D F+ W A + GP+D+ + + + I P +YP +PPK F ++ HPNI N G ICLDIL+ +W+PA T+S L +I LL DP P PL ++A++ K Sbjct: 3 AEKRLLQEYRSILKEQRQKGSASTLSSNGILDLKPVSEDNFYKWTAKLKGPTDTGYQDAFWELQIDIPSNYPTQPPKFTFIVSDDIPRNRRQRQTNQIQDDDEFEGAEKEVLRHCYRMPHPNIAFNTGEICLDILQAKWTPAWTLSSALTAIVLLLNDPEPLSPLDIDMANLMK 176
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2F_BOVIN (NEDD8-conjugating enzyme UBE2F OS=Bos taurus GN=UBE2F PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.552e-13 Identity = 44/141 (31.21%), Postives = 66/141 (46.81%), Query Frame = 1 Query: 235 RNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTD 636 R + + + KE+ +L+ + P +C + H + P + + GG F P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + D Sbjct: 28 RRVSVRDRLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRD 168
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.552e-13 Identity = 38/116 (32.76%), Postives = 59/116 (50.86%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 579 S A+KR+ KE K++ +PP A P D++ W I GP +P+ G + ++ FP DYPF PP + T + N +CL D E W+PA ++ +L + S +T Sbjct: 3 SIQANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMITP--NGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMT 116
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC6_CANGA (Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata GN=UBC6 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.552e-13 Identity = 36/116 (31.03%), Postives = 62/116 (53.45%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 579 ++ A KR+ KE K + ++PP A P +++ W I GP D+P+ GG + ++ FP DYP+KPP + T + N +CL D + W+P +++ +L + S +T Sbjct: 3 TKQAQKRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTLTFPSDYPYKPPAIRMITP--NGRFKENTRLCLSMSDYHPDTWNPGWSVATILNGLLSFMT 116
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UB2J1_MOUSE (Ubiquitin-conjugating enzyme E2 J1 OS=Mus musculus GN=Ube2j1 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.552e-13 Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 250 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLL 576 A KR+ KE +L KDP A P+ D++F W T+ GP DS F GGV+ I PP+YP KPP + T + ICL I E W P+ +I LL+I + Sbjct: 11 AVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTA--NGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM 119
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UB2J1_HUMAN (Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens GN=UBE2J1 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.552e-13 Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 250 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLL 576 A KR+ KE +L KDP A P+ D++F W T+ GP DS F GGV+ I PP+YP KPP + T + ICL I E W P+ +I LL+I + Sbjct: 11 AVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTA--NGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM 119
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UB2FB_MOUSE (NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.288e-12 Identity = 46/141 (32.62%), Postives = 65/141 (46.10%), Query Frame = 1 Query: 235 RNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTD 636 R M K + E+ +L+ + P +C + H + P + + GG F I P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DPL E A + D Sbjct: 28 RRFSMRDKLLVTEVAELEANLPWTCKVHFPDPNKLHCFQLTVSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSADGTGWAPTRTLKDVVWGLNSLFTDLLNFYDPLNIEAAEHHLQD 168
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.682e-12 Identity = 37/116 (31.90%), Postives = 61/116 (52.59%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 579 S+ + KR+ KE K + +PP SA P +++ W I GP +PF G + + FP +YPFKPP ++ T + N +CL D + W+PA +++ +L + S +T Sbjct: 3 SRQSQKRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMITP--NGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFMT 116 The following BLAST results are available for this feature:
BLAST of DR406094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
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Sequences
The
following sequences are available for this feature:
EST sequence >DR406094 ID=DR406094; Name=DR406094; organism=Citrus sinensis; type=EST; length=637bpback to top |