DR406094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC6_ASHGO (Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii GN=UBC6 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.682e-12 Identity = 36/116 (31.03%), Postives = 62/116 (53.45%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 579 S+ A KR++KE K + ++PP A P D++ W I GP ++P+ G + ++ FP DYPF PP + T + N +CL D + W+P+ +++ +L + S +T Sbjct: 3 SRQAYKRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTLVFPNDYPFNPPAIRMLTP--NGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMT 116
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC17_CAEEL (Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis elegans GN=ubc-17 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 6.393e-12 Identity = 47/120 (39.17%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 253 SKRINKELKDLQKDPP--ASCSAGPVADD--MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTK-----VFHPNINSNGSICLDIL-------KEQWSPALTISKVLLSI 564 +KRI KEL + P AS S D+ + + I GP D+P+A G+F I FP YPF PPK AF T F+PN+ ++G ICL IL +E+W+P ++ +VL+SI Sbjct: 411 TKRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCSLMQVLVSI 530
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UB2J2_BOVIN (Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus GN=UBE2J2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.424e-11 Identity = 34/127 (26.77%), Postives = 64/127 (50.39%), Query Frame = 1 Query: 220 SDGLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 591 S+ + R A++R+ ++ ++KDP A P+ ++ W + GP +P+ GG + + FP ++PFKPP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 3 SNSVKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11 Identity = 34/110 (30.91%), Postives = 54/110 (49.09%), Query Frame = 1 Query: 343 WQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL--------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 630 W DS +AG + + FP YP +PP + F +K+FHPNI +G +C+ IL K++W+P I +++SI +L PN P + + MY+ Sbjct: 68 WDIYFTLGGDSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYR 177
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UB2J2_MOUSE (Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus GN=Ube2j2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11 Identity = 32/117 (27.35%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 250 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 591 A++R+ ++ ++KDP A P+ ++ W + GP +P+ GG + + FP ++PFKPP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UB2J2_HUMAN (Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens GN=UBE2J2 PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11 Identity = 32/117 (27.35%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 250 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 591 A++R+ ++ ++KDP A P+ ++ W + GP +P+ GG + + FP ++PFKPP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127 The following BLAST results are available for this feature:
BLAST of DR406094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
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Sequences
The
following sequences are available for this feature:
EST sequence >DR406094 ID=DR406094; Name=DR406094; organism=Citrus sinensis; type=EST; length=637bpback to top |