DR406094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.515e-29 Identity = 60/130 (46.15%), Postives = 84/130 (64.62%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 630 S A +R+ ++ K LQ DPPA S P+ +++ WQA I GP DS + G F +S+ F +YP P V F +K+FHPN+ ++GSICLDIL+ QWSP I+ +L SI SLL DPNP+ P E A +++ Sbjct: 2 STAARRRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFR 131
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.515e-29 Identity = 57/130 (43.85%), Postives = 85/130 (65.38%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 630 S A +R+ ++ K +Q+D P+ SA P+ D++ W A I+GP+D+PF G F + + F YP KPP V F +++FHPN+ ++G +CLDIL+ +WSP +S +L SI SLL DPN P E A++YK Sbjct: 2 STPAKRRLMRDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYK 131
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.978e-29 Identity = 61/121 (50.41%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 256 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 618 KRI KE + L DP +A P D++ ++Q TI GP SP+ G+F + ++ P DYP + PKV F TK++HPNI+ G ICLD+LK WSPAL I VLLSI +LL PNP+DPL ++A Sbjct: 6 KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVA 126
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.407e-29 Identity = 60/127 (47.24%), Postives = 82/127 (64.57%), Query Frame = 1 Query: 256 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 +RI KE + L +P A P + ++ I GP DSPF GG F + + P +YP PKV F TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +K++ Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSN 132
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.282e-28 Identity = 58/125 (46.40%), Postives = 82/125 (65.60%), Query Frame = 1 Query: 256 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 630 KRI KE++ L +DPP A P D++ +++ T+ GP S + GG F + + P +YP PP V F TK++HPN++ G ICL LK+ WSPAL I VLLSI +L+ PNPDDPL ++A ++K Sbjct: 5 KRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWK 129
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.675e-28 Identity = 55/130 (42.31%), Postives = 84/130 (64.62%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 630 S A +R+ ++ K +++D P SA P+ D++ W A I+GP+D+P+ G F + + F DYP KPP V F +++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A ++K Sbjct: 2 STPARRRLMRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFK 131
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.675e-28 Identity = 61/130 (46.92%), Postives = 87/130 (66.92%), Query Frame = 1 Query: 253 SKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 +KRI KE++ ++ DP A + V++ D+ H + T +GP +P+ GG F+V I P +YPFKPPK+ F TKV+HPNI+S G+ICLDILK WSP +T+ L+S+ +LL P P+DP E+A Y D Sbjct: 4 AKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRD 133
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.872e-28 Identity = 54/130 (41.54%), Postives = 84/130 (64.62%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 630 S A +R+ ++ K +++D P SA P+ D++ W A I+GP+D+P+ G F + + F +YP KPP V F +++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A ++K Sbjct: 2 STPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFK 131
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.872e-28 Identity = 54/130 (41.54%), Postives = 84/130 (64.62%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 630 S A +R+ ++ K +++D P SA P+ D++ W A I+GP+D+P+ G F + + F +YP KPP V F +++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A ++K Sbjct: 2 STPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFK 131
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.311e-28 Identity = 56/117 (47.86%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 253 SKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 603 SKR+ EL +L P SA P D++F+W TI G D+ + F +S+ FP DYP+KPP V F T+ FHPN+++NG+ICLDILK++WSP + +L+SI SLL +PN + PL Sbjct: 8 SKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPL 124 The following BLAST results are available for this feature:
BLAST of DR406094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
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Sequences
The
following sequences are available for this feature:
EST sequence >DR406094 ID=DR406094; Name=DR406094; organism=Citrus sinensis; type=EST; length=637bpback to top |