DR406093

Overview
NameDR406093
Unique NameDR406093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13714 contig Csv1_Contig13714:427..1177. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.209e-15
Identity = 51/125 (40.80%), Postives = 68/125 (54.40%), Query Frame = 1
Query:  136 LDVWDPFDGFLSSALTNAPSSA-----RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            LDV D   G      T +  SA     R+    A    D KE P A+ F  D+PGL            R+L++SGER +E+ E + K+ R+ER  GKF+R+F LPDNA V++V A   +GVLTVT
Sbjct:   20 LDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVT 144          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.885e-15
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 1
Query:  220 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKNDKWHRVERSS-----GKFLRRFRLPDNAKVEQVKASMENGVLTV 492
            + A IDW E+  +H+FK ++PG            G +L I GE  KE++++N  WH  ER +      +FLRR  LP+N KV+QVKA +ENGVLTV
Sbjct:   20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTV 115          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.767e-15
Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 1
Query:  184 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            NAP+    R+    A    D KE P ++VF  D+PG++            +LLISGER +E+E++  K+ ++ER  GK +R+F LP+NA +E + A  ++GVLTVT
Sbjct:   27 NAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVT 132          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.432e-14
Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 1
Query:  157 DGFLSSALTNAP--SSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            DG   +   NAP  S  R+    A    D KE P ++VF+ D+PGL+            +LLI GER +++E++  K+ R+ER  GK +R+F LP+NA  + + A  ++GVL+VT
Sbjct:   25 DGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVT 139          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 40/106 (37.74%), Postives = 66/106 (62.26%), Query Frame = 1
Query:  184 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            + PS A  R+    A    D KE P ++VF  D+PGL+            +L+ISG+R++E+E++  K+ R+ER  GKF+++F LP++A  +++ A  ++GVLTVT
Sbjct:   35 SGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVT 140          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 45/111 (40.54%), Postives = 67/111 (60.36%), Query Frame = 1
Query:  181 TNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSK----EQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            T  P+ A  R+    A    D K+ P A+ F  D+PGL+           R+L+ISGER +    E++E++ K+ R+ER  GKF+R+F LPDNA V+++ A  ++GVLTVT
Sbjct:   36 TGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVT 146          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.212e-13
Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:  202 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKND--KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            R+    A    D KE P ++VF AD+PG++            +L++SGER++ ++++ D  K+ R+ER  GKF+R+F LP+NA VE + A  ++GVL VT
Sbjct:   48 RDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVT 147          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.700e-13
Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 1
Query:  202 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            R+    A    D KE   A+ F  D+PGL            R+L+ISGER +E+ E + K+ R+ER  GKF+R+F LPDNA V++V A   +GVLTVT
Sbjct:   38 RDARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRREERE-DAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVT 134          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.700e-13
Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = 1
Query:  235 DWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            D KE P A+ F  D+PGL            R+L+ISGER +E+ E + K+ R+ER  GKF+R+F LPDNA ++++ A   +GVLTVT
Sbjct:   56 DVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERRREERE-DAKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVT 141          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.700e-13
Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 1
Query:  184 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            N PS A  R+    A    D  E P A+VF  D+PG++            +L++SG+R ++ +E    K+ R+ER  GKF+R+F+LPDNA +E++ A+  +GVL VT
Sbjct:   30 NNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVT 136          
The following BLAST results are available for this feature:
BLAST of DR406093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HSP22_MAIZE2.209e-1540.8017.8 kDa class II heat shock protein OS=Zea mays P... [more]
HS157_ARATH2.885e-1543.7515.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP21_PEA3.767e-1539.6217.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_SOYBN1.432e-1437.3917.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP21_HELAN1.870e-1437.7417.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP18_ORYSJ1.870e-1440.5418.0 kDa class II heat shock protein OS=Oryza sati... [more]
HSP22_IPONI1.212e-1339.0018.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP23_MAIZE2.700e-1343.8817.0 kDa class II heat shock protein OS=Zea mays G... [more]
HSP21_MAIZE2.700e-1345.9817.5 kDa class II heat shock protein OS=Zea mays P... [more]
HS177_ARATH2.700e-1338.3217.7 kDa class II heat shock protein OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248L03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248L03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406093 ID=DR406093; Name=DR406093; organism=Citrus sinensis; type=EST; length=753bp
GGGGGATCTTCAAATTGATTGATCAAAGCATTTCCGAAGTTGTTGAGCAT
TTAATTAGCGTCCCAGTTTGCCATAATGTCACTCATTCCAAGCATCTTCG
GTGGCCGAAGAACCAACGTGTTCGATCCAGTTTCATTAGATGTATGGGAT
CCTTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGCCGTCTTCGGC
TAGGGAAACATCCCAATTCGCCAATGCAAGAATTGACTGGAAAGAGACTC
CTCAGGCTCACGTATTCAAAGCTGATCTTCCAGGGCTGAGGAAAGAAGAA
GTAAAAGTTGAGGTTGAAGAGGGCAGGATTCTGCTGATAAGCGGAGAGAG
GAGCAAGGAGCAGGAAGAGAAGAATGACAAGTGGCATCGCGTCGAGAGGA
GCAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGCTAAGGTG
GAACAGGTTAAGGCCAGCATGGAGAATGGTGTGCTCACAGTCACCGTTCC
TAAACAGGAGGAGAAGAAACCTGAAGTTAAGGCTATTGAGATCTCTGGCT
AAGTGATAACTGTAGATGTTTTCAAGATAGTGTCTTTGGTTTGCTAATAA
ATTTGGTACGAAAGCAAAGCCCTTGTGTGTTTGTATGTNGTGTGTNGTGT
TCGTTTTCTTCCCTTCCCCCTGTTTAATTTNNNGTGANNNTGTTTGTGTG
TTTGCAAGAGCTTCAGGAGCCAGTCTCAAGCGTTGTAACTAGTTTTTTAA
TGA
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