DR406020

Overview
NameDR406020
Unique NameDR406020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.697e-39
Identity = 82/205 (40.00%), Postives = 125/205 (60.98%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDG-YKDVEPSDSAL--LCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTS 621
            + P   DWR++  VT +K+QG+CG+CW+F+T  ++E   A+    LI LSEQ+L+DCD+   GC+GG +  AFE ++  GG+ TE DYP+ G +  C + +    VVS+ G Y+ V  ++  L  L  AV     + M   A+D   Y  G+ +  C N+   ++HAVL+VGYG ENG  YW+ KN+WG  WG +GYF + ++ +
Sbjct:  143 KGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCDSVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVG---PIPMAIDAADIVNYYRGVIS-SCENNG--LNHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQNVN 341          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.523e-39
Identity = 85/201 (42.29%), Postives = 122/201 (60.70%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTG---DLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQP-ISVGMVGSASDFQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGY 597
            +AP S+DWR +G VTP++DQ  CGSC++F +  A+EG   +  G   + + LSE+ LV C  D  + GC+GG     ++++I NG +  ESDYPYTG D TC    +      I GY  V  ++ A L AA+ Q  + V +  S++ FQLY SG Y+   C N+ + ++H V  VGYG  +G++ WIV+NSWGT WG  GY
Sbjct:   86 QAPESVDWRAQGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRDNGNNGCNGGLGSNVYDYIIQNG-VAKESDYPYTGTDSTCKTNVKA--FAKITGYNKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYSDTKCKNNFFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGY 283          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.523e-39
Identity = 90/210 (42.86%), Postives = 123/210 (58.57%), Query Frame = 1
Query:   10 SCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYG----SENGEDYWIVKNSWGTSWGIDGYFYITRD 615
            S   P  ++W+KRG VTPV+ QG C SCW+FS TGAIEG     TG LI LS Q LVDC     ++GC  G    A  +V+ NGG+++E+ YPY   DG+C  + E +   +I G++ V  ++ AL+ A     PISV +    + F  Y  GI Y  +CS+    + H++L+VGYG      +G  YW+VKNS GT WG  GY  I+RD
Sbjct:  111 SVNLPKFINWKKRGYVTPVQTQGRCNSCWAFSVTGAIEGQMFRKTGQLIPLSVQNLVDCSRPQGNWGCYLGNTYLALHYVMENGGLESEATYPYEEKDGSCRYSPENS-TANITGFEFVPKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSS--CVVTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRD 317          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.601e-39
Identity = 84/203 (41.38%), Postives = 120/203 (59.11%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV---EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD 615
            + P   DWR+   VT VK+QG+CG+CW+F+T G++E   A+    LI+LSEQ+L+DCD    GCDGG +  A+E V+N GGI  E+DYPY   +G C +   +  V     Y+ V   E     LL      P+++     ASD   Y  G+    C+N  + ++HAVL+VGY  ENG  +WI+KN+WGT WG  GYF + ++
Sbjct:  112 KGPLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGDCRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAI----DASDIVNYKRGVIR-YCAN--HGLNHAVLLVGYAVENGVPFWILKNTWGTDWGEQGYFRVQQN 307          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 6.009e-39
Identity = 90/181 (49.72%), Postives = 116/181 (64.09%), Query Frame = 1
Query:   10 SCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTG---DLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV-EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGS 531
            S  AP+ +DWR +G VTP+K+QG CG CWSFSTTG+ EG + + +G   DL+SLSEQ L+DC  +  + GC+GG M  AFE++INN GIDTES YPYT  DG     K       I  Y++V   S+++L  A+   P+SV +  S   FQLY SGI Y   CS  P  +DH VL+VGYGS
Sbjct:  109 STPAPT-VDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKECKFKTSNIGAQIVSYQNVTSGSEASLQSASNNAPVSVAIDASNESFQLYESGIYYEPACS--PTQLDHGVLVVGYGS 286          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.009e-39
Identity = 88/203 (43.35%), Postives = 118/203 (58.13%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTC--NITKEETKVVSIDGYKDV-EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD 615
            + P   DWR+   VT VK+QG CG+CW+F+T G++E   A+     I+LSEQ+L+DCD    GCDGG +  AFE V+N GGI  ESDYPY   +G C  N  K   KV     Y  V E     LL +    P+++     ASD   Y  GI    C+N  + ++HAVL+VGY  ENG  +WI+KN+WG  WG  GYF + ++
Sbjct:  112 KGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDFVDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAI----DASDIVNYKRGIMK-YCAN--HGLNHAVLLVGYAVENGVPFWILKNTWGADWGEQGYFRVQQN 307          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.009e-39
Identity = 85/201 (42.29%), Postives = 118/201 (58.71%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL-CAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD 615
            + P   DWR+   VT VK+QG CG+CW+F+T G++E   A+    LI+LSEQ+L+DCD    GCDGG +  A+E V+N GGI  E+DYPY   +G C +   +  V     Y+ V   +  L     +  PI V +   ASD   Y  GI    C N  + ++HAVL+VGYG ENG  +WI+KN+WG  WG  GYF + ++
Sbjct:  112 KGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAI--DASDIVGYKRGIIR-YCEN--HGLNHAVLLVGYGVENGIPFWILKNTWGADWGEQGYFRVQQN 307          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.848e-39
Identity = 84/201 (41.79%), Postives = 116/201 (57.71%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL-CAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD 615
            + P   DWR+   VT VK+QG CG+CW+F+T  ++E   A+    LI+LSEQ+L+DCD    GC+GG +  A+E V+  GG+  E+DYPY G DG C +   +  V     Y+ +   +  L     +  PI V +   ASD   Y  GI    CSN  Y  +HAVL+VGYG EN   YWI+KN+WG  WG  GYF + ++
Sbjct:  112 KGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDYVDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAI--DASDIVNYRRGIMR-YCSN--YGFNHAVLLVGYGVENNVPYWILKNTWGEDWGEQGYFRVQQN 307          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.025e-38
Identity = 84/201 (41.79%), Postives = 122/201 (60.70%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTG---DLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQP-ISVGMVGSASDFQLYTSGIY-NGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGY 597
            +AP S+DWRK G VTP++DQ  CGSC++F +  A+EG   +  G   + + LSE+ +V C  D  + GC+GG     ++++I + G+  ESDYPYTG D TC    +      I GY  V  ++ A L AA+ Q  + V +  S++ FQLY SG Y +  C N+ + ++H V  VGYG  +G++ WIV+NSWGT WG  GY
Sbjct:   93 QAPESVDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEH-GVAKESDYPYTGSDSTCKTNVK--SFAKITGYTKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGY 290          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.339e-38
Identity = 87/181 (48.07%), Postives = 111/181 (61.33%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTG--DLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV-EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSENG 540
            +A + +DWR +G VTP+K+QG CG CWSFSTTGA EG   L  G  +L+SLSEQ L+DC  +  + GC+GG M  AFE++INN GIDTES YPYT  DG       +     +  Y +V   S+S L     Q P SV +  S   FQLY SGIYN   CS+    +DH VL VG+G+ +G
Sbjct:  109 DASAQVDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDCSGSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKKCKFNPKNVAAQLSSYVNVTSGSESDLAAKVTQGPTSVAIDASNQSFQLYVSGIYNEPACSST--QLDHGVLAVGFGTGSG 287          
The following BLAST results are available for this feature:
BLAST of DR406020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CATV_NPVLD2.697e-3940.00Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CPP3_ENTHI3.523e-3942.29Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CATM_MOUSE3.523e-3942.86Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATV_NPVCD4.601e-3941.38Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CYSP4_DICDI6.009e-3949.72Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CATV_NPVCF6.009e-3943.35Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVAP6.009e-3942.29Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATV_NPVHC7.848e-3941.79Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CPP2_ENTHI1.025e-3841.79Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CYSP7_DICDI1.339e-3848.07Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248H16 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248H16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406020 ID=DR406020; Name=DR406020; organism=Citrus sinensis; type=EST; length=731bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGT
TCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGAC
CTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTA
TGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACA
ACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGGT
ACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTA
TAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAAC
AACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATAT
ACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTGA
TCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTATT
GGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTTT
TACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATGC
TATGGCTTCTTATCCAATCGAAGAATCCTATGCACCATCTCCCTATTCAC
CACCATCCGAGCCACCCCCGCTACCGTCACC
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