DR406020

Overview
NameDR406020
Unique NameDR406020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.636e-36
Identity = 79/201 (39.30%), Postives = 114/201 (56.72%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL-CAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD 615
            + P   DWR+   VT VK+QG CG+CW+F+T  ++E   A+    LI+LSEQ+++DCD    GC+GG +  AFE +I  GG+  ESDYPY   +  C +   +  V   D Y+ +   +  L     +  PI + +   A+D   Y  GI    C N    ++HAVL+VGYG EN   YW  KN+WGT WG DG+F + ++
Sbjct:  111 KGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAI--DAADIVNYKQGIIK-YCFNSG--LNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQN 306          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.137e-36
Identity = 82/204 (40.20%), Postives = 119/204 (58.33%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDG-YKDV---EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD 615
            + P + DWR++  VT +K+Q +CG+CW+F+T  +IE   A+     I LSEQ+++DCD    GCDGG +  AFE +I  G +  E +YPY GV+  C +  +ET VV + G Y+ V   E     LL A    P+++     AS    Y  GI +  C N  Y ++HAVL+VGYG EN   +W  KN+WG  WG +GYF + ++
Sbjct:  115 KGPLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDYVDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFREEKLKDLLRAVGPIPMAI----DASGIVNYHHGIIH-YCEN--YGLNHAVLLVGYGVENNVPFWTFKNTWGKDWGEEGYFRVRQN 311          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.791e-36
Identity = 83/209 (39.71%), Postives = 117/209 (55.98%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV-EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            P S+DWR  G VT VK+Q  CG+CW+F+    +E I  +  G L  LSEQ+++DC    YGC GG+   AFE++I+N G+ + + YPY    GTC  T        I GY  V   ++S+++ A  +QPI+V  V + ++FQ Y SG++NG C      ++HAV  +GY    G+D  I    WG  WG  GY  + RD S   G C I
Sbjct:    3 PQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDC-AKGYGCKGGWEFRAFEFIISNKGVASGAIYPYKAAKGTCK-TDGVPNSAYITGYARVPRNNESSMMYAVSKQPITVA-VDANANFQYYKSGVFNGPCGTS---LNHAVTAIGY----GQDSIIYPKKWGAKWGEAGYIRMARDVSSSSGICGI 201          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.218e-36
Identity = 78/201 (38.81%), Postives = 114/201 (56.72%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL-CAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD 615
            + P   DWR+   VT VK+QG CG+CW+F+T  ++E   A+    LI+LSEQ+++DCD    GC+GG +  AFE +I  GG+  ESDYPY   +  C +   +  V   D Y+ +   +  L     +  PI + +   A+D   Y  GI    C N    ++HAVL+VGYG EN   YW  KN+WGT WG +G+F + ++
Sbjct:  111 KGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAI--DAADIVNYKQGIIK-YCFNSG--LNHAVLLVGYGVENNIPYWTFKNTWGTDWGEEGFFRVQQN 306          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.086e-35
Identity = 83/201 (41.29%), Postives = 118/201 (58.71%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSAL--LCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITR 612
            + P++ DWR    VT VKDQG CG+CW+F+  GA+E   A+    LI L+EQ+LVDCD    GCDGG +  A+E +++ GG++ E DYPY  V   C +   +  V   + Y+ V  S+  L  L   V  PI++ +   A D   Y  G+ +  C N+   ++HAVL+VGYG EN   YW +KNSWG+ +G +GY  I R
Sbjct:  125 QRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDFVDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAVRLPCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHV-GPIAIAV--DAVDLTDYYGGVIS-FCENNG--LNHAVLLVGYGIENNVPYWTIKNSWGSDYGENGYVRIRR 319          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.532e-34
Identity = 80/200 (40.00%), Postives = 112/200 (56.00%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL-CAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITR 612
            + P S DWR    +T VKDQG CG+CW F++ GA+E   A+    LI LSEQ+LVDCD    GCDGG +  A+E ++  GG++ E DY Y      C +   +      + Y+ V  ++  L        PI++ +   A D   Y  GI +  C N+   ++HAVL+VGYG EN   YWI+KNSWG+ +G DGY  + R
Sbjct:  125 QRPVSFDWRSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDCDFVDMGCDGGLIHTAYEQIMKMGGVEQEFDYSYKAERQPCALKPHKFATGVRNCYRYVILNEERLEDLLRYVGPIAIAV--DAVDLTDYYGGIVS-FCENNG--LNHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRR 319          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.297e-33
Identity = 84/247 (34.01%), Postives = 135/247 (54.66%), Query Frame = 1
Query:    7 QSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDL-ISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYG-----------------------SEN--GED------YWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINA 651
            +S + P S D+R +    P KDQG+CGSCW+F+  G  E +      ++ IS SEQ++VDC T +YGCDGG   YAF ++INN G+    +YPY G +    +    + +  +    DV+P++  ++      P+++  VG++ DF LY+ G+++G+C+ +   ++H+VL+VGYG                        EN  G+D      YWIV+NSWG +WG  GY  I R+ + + G C + +
Sbjct:  259 KSKDFPDSRDYRSKFNFLPPKDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDCSTENYGCDGGNPFYAFLYMINN-GVCLGDEYPYKGHEDFFCLNYRCSLLGRVHFIGDVKPNE-LIMALNYVGPVTIA-VGASEDFVLYSGGVFDGECNPE---LNHSVLLVGYGQVKKSLAFEDSHSNVDSNLIKKYKENIKGDDDDDIIYYWIVRNSWGPNWGEGGYIRIKRNKAGDDGFCGVGS 499          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.404e-33
Identity = 82/235 (34.89%), Postives = 124/235 (52.77%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYG------------------SENGED-------YWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            + P  LD+R++GIV   KDQG CGSCW+F++ G IE + A    +++S SEQE+VDC   ++GCDGG+  Y+F +V+ N  +    +Y Y   D    +     + VS+     V+ +   L    V  P+SV  VG  +DF  Y+ G+YNG CS +   ++H+VL+VGYG                   EN          YWI+KNSW   WG +G+  ++R+ + +   C I
Sbjct:  332 KVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNIESVFAKKNKNILSFSEQEVVDCSKDNFGCDGGHPFYSFLYVLQN-ELCLGDEYKYKAKDDMFCLNYRCKRKVSLSSIGAVKENQLILALNEV-GPLSVN-VGVNNDFVAYSEGVYNGTCSEE---LNHSVLLVGYGQVEKTKLNYNNKIQTYNTKENSNQPDDNIIYYWIIKNSWSKKWGENGFMRLSRNKNGDNVFCGI 560          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.434e-32
Identity = 82/210 (39.05%), Postives = 119/210 (56.67%), Query Frame = 1
Query:   28 SLDWRKRGIVTPVKDQGS-CGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNIT-KEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYG--SENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            +L+W +   V+P+KDQG  CGSCW+FS+  ++E +  L       LSEQELV+CD +S GC GG    A E+ I++ G+  ES+ PYTG+   C  + K +  + SI   K  +  + +L    V  P  VG +    + +LY+ GI+ G C  +   ++HAVL+VG G   E G  YWI+KNSWG  WG +G+  + R T     KC I
Sbjct:  230 NLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCDKSSMGCAGGLPITALEY-IHSKGVSFESEVPYTGIVSPCKPSIKNKVFIDSISILKGNDVVNKSL----VISPTVVG-IAVTKELKLYSGGIFTGKCGGE---LNHAVLLVGEGVDHETGMRYWIIKNSWGEDWGENGFLRLQR-TKKGLDKCGI 429          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 4.171e-32
Identity = 76/208 (36.54%), Postives = 114/208 (54.81%), Query Frame = 1
Query:   28 SLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIV--GYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            +LDWR+   VT VKDQ +CG CW+FST G++EG           LS QEL+DCD+ S GC GG ++ A+E+V    G+ +  D P+      C++ K   K VS+  Y  V      +  +    P SV  +  + +   Y SG++ G+C      ++HAV++V  GY     + YW+V+NSWGT WG +GY  + R T++   KC +
Sbjct:  232 NLDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCDSFSNGCQGGLLESAYEYV-RKYGLVSAKDLPFVDKARRCSVPK--AKKVSVPSY-HVFKGKEVMTRSLTSSPCSV-YLSVSPELAKYKSGVFTGECGKS---LNHAVVLVGEGYDEVTKKRYWVVQNSWGTDWGENGYMRLER-TNMGTDKCGV 430          
The following BLAST results are available for this feature:
BLAST of DR406020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CATV_NPVAC1.636e-3639.30Viral cathepsin OS=Autographa californica nuclear ... [more]
CATV_NPVBS2.137e-3640.20Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
BROM2_ANACO2.791e-3639.71Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
CATV_NPVRO6.218e-3638.81Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVMC3.086e-3541.29Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATV_NPVSE1.532e-3440.00Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CYSP_PLAVN1.297e-3334.01Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
CYSP_PLAFA8.404e-3334.89Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
CYSP_THEAN1.434e-3239.05Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
CYSP_THEPA4.171e-3236.54Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248H16 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248H16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406020 ID=DR406020; Name=DR406020; organism=Citrus sinensis; type=EST; length=731bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGT
TCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGAC
CTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTA
TGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACA
ACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGGT
ACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTA
TAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAAC
AACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATAT
ACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTGA
TCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTATT
GGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTTT
TACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATGC
TATGGCTTCTTATCCAATCGAAGAATCCTATGCACCATCTCCCTATTCAC
CACCATCCGAGCCACCCCCGCTACCGTCACC
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