DR406020

Overview
NameDR406020
Unique NameDR406020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATC_RAT (Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Ctsc PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 5.637e-29
Identity = 87/233 (37.34%), Postives = 124/233 (53.22%), Query Frame = 1
Query:    7 QSCEAPSSLDWRK-RGI--VTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLIS--LSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKD---VEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPY----YIDHAVLIVGYGSE--NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            Q    P S DWR  RGI  V+PV++Q SCGSC+SF++ G +E    ++T +  +  LS QE+V C   + GCDGG+          + G+  E+ +PYT  D  C   +   +  S + Y         + AL+   + +  P++V       DF  Y SGIY+    +DP+      +HAVL+VGYG +   G DYWIVKNSWG+ WG  GYF I R T     +CAI ++A
Sbjct:  226 QILSLPESWDWRNVRGINFVSPVRNQESCGSCYSFASLGMLEARIRILTNNSQTPILSPQEVVSCSPYAQGCDGGFPYLIAGKYAQDFGVVEENCFPYTATDAPCKPKENCLRYYSSEYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVH-DDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIVKNSWGSQWGESGYFRIRRGTD----ECAIESIA 453          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.616e-29
Identity = 76/224 (33.93%), Postives = 114/224 (50.89%), Query Frame = 1
Query:   22 PSSLDWRK-RGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTG-VDGTCNITKEETKVVSIDGYKDVEPSDSALL-CAAVQQPISVGMVGSASDFQLYTSGIYNGDCSN-DPYYIDHAVLIVGYGSENGED--------------------YWIVKNSWGTSWGIDGYFYITRDTS 621
            P S DWRK    ++P+KDQ +C  CW+ +  G IE +  +   D + +S QEL+DC     GC GG++  AF  V+NN G+ +E DYP+ G V       K+  KV  I  +  ++ ++  +    A   PI+V +  +    QLY  G+     +  DP  +DH+VL+VG+GS   E+                    YWI+KNSWG  WG  GYF + R ++
Sbjct:  129 PFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTI--NMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSN 350          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28
Identity = 76/193 (39.38%), Postives = 107/193 (55.44%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDG 594
            E   ++DWR     T VK+QG C S W+FS + ++E   A+     I+ S Q++VDCD  + GC GGY  YA E+V+   G+ + ++YPY   + TC  ++  T    I+GY  V  S S L       PISVG+   AS++Q Y SG+++   SN     +H  L VG+ S N    WIV+NSWGT WG  G
Sbjct:  110 EGLGAVDWRN---YTTVKEQGQCASGWAFSVSNSLEAWYAIRGFQKINASTQQIVDCDYNNTGCSGGYNAYAMEYVL-RVGLVSSTNYPYVAKNQTCKQSRNGT--YFINGYSFVGGSQSNLQYYLNNYPISVGV--EASNWQFYRSGLFSNCSSNG---TNHYALAVGFDSANN---WIVQNSWGTQWGESG 288          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.142e-28
Identity = 85/233 (36.48%), Postives = 125/233 (53.65%), Query Frame = 1
Query:    7 QSCEAPSSLDWRK-RGI--VTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLIS--LSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKD---VEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPY----YIDHAVLIVGYGSE--NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            Q    P S DWR  +G+  V+PV++Q SCGSC+SF++ G +E    ++T +  +  LS QE+V C   + GCDGG+          + G+  ES +PYT  D  C   +   +  S D Y         + AL+   + +  P++V       DF  Y SGIY+    +DP+      +HAVL+VGYG +   G +YWI+KNSWG++WG  GYF I R T     +CAI ++A
Sbjct:  226 QILNLPESWDWRNVQGVNYVSPVRNQESCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSPYAQGCDGGFPYLIAGKYAQDFGVVEESCFPYTAKDSPCKPRENCLRYYSSDYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVH-DDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGRDPVTGIEYWIIKNSWGSNWGESGYFRIRRGTD----ECAIESIA 453          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 8.140e-28
Identity = 75/214 (35.05%), Postives = 108/214 (50.47%), Query Frame = 1
Query:    4 VQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQP-ISVGMVGSASDFQLYTSGIYNG------DCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSL 624
            + S   PS LD R    VTP++ QG CGSCW+FS   + E          + L+EQELVDC + + GC G  +    E++  NG +  E  YPY   + +C+  +   +   +  Y  + P DS  +  A+ Q   +V ++    D   +    Y+G      D    P Y  HAV IVGYG+  G DYWIV+NSW T+WG +GY Y   + +L
Sbjct:  104 INSVSLPSELDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDCASQN-GCHGDTIPRGIEYIQQNGVVQ-EHYYPYVAREQSCH--RPNAQRYGLKNYCQISPPDSNKIRQALTQTHTAVAVIIGIKDLNAFRH--YDGRTIMQHDNGYQPNY--HAVNIVGYGNTQGVDYWIVRNSWDTTWGDNGYGYFAANINL 309          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.140e-28
Identity = 81/227 (35.68%), Postives = 118/227 (51.98%), Query Frame = 1
Query:   22 PSSLDWRK-RG--IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLIS--LSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCN----ITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPY----YIDHAVLIVGYGSEN--GEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            P+S DWR  RG   V+PV++Q SCGSC++F++T  +E    ++T +  +  LS QE+V C   + GC+GG+          + G+  E+ +PY G D  C          ++   + G+          L      P++V       DF  Y  GIY      DP+      +HAVL+VGYG+++  G DYWIVKNSWG+ WG DGYF I R T     +CAI ++A
Sbjct:  205 PTSWDWRNVRGTNFVSPVRNQASCGSCYAFASTAMLEARIRILTNNTQTPILSPQEIVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYAGSDSPCKPNDCFRYYSSEYYYVGGFYGACNEALMKLELVRHGPMAVAFE-VYDDFFHYQKGIYYHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGSRWGEDGYFRIRRGTD----ECAIESIA 426          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.063e-27
Identity = 73/219 (33.33%), Postives = 115/219 (52.51%), Query Frame = 1
Query:   22 PSSLDWRK-RGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTG--VDGTCNITKEETKVVSIDGYKDVEPSDSALL-CAAVQQPISVGMVGSASDFQLYTSGIYNGDCSN-DPYYIDHAVLIVGYGSE-----------------NGEDYWIVKNSWGTSWGIDGYFYITR 612
            P + DWRK + I++ VK+QGSC  CW+ +    I+ +  +     + +S QEL+DC+    GC+GG++  A+  V+NN G+ +E DYP+ G      C + K+  KV  I  +  +  ++ A+    AV  PI+V +  +    Q Y  G+     S+ DP  +DH+VL+VG+G +                 +   YWI+KNSWG  WG  GYF + R
Sbjct:  127 PRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCERCGNGCNGGFVWDAYLTVLNNSGLASEKDYPFQGDRKPHRC-LAKKYKKVAWIQDFTMLSNNEQAIAHYLAVHGPITVTI--NMKLLQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQTGTVLSHSRKRRHSSPYWILKNSWGAHWGEKGYFRLYR 342          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.000e-27
Identity = 67/205 (32.68%), Postives = 99/205 (48.29%), Query Frame = 1
Query:    4 VQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNG-GIDTESDYPYTGVDGTCNITKEETKVVSI---DGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYI 606
            + +   P   DWR + +V PV++Q  CG CW+FS   AIE   A+    L  LS Q+++DC   + GC GG    A  W+      +  +S YP+  V+G C    +    VS+     Y      D          P+ V  +  A  +Q Y  GI    CS+     +HAVLI G+       YW+V+NSWG+SWG++GY ++
Sbjct:   94 IPNVSLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFNNSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVV--IVDAMSWQDYLGGIIQHHCSSGE--ANHAVLITGFDRTGNTPYWMVRNSWGSSWGVEGYAHV 294          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.467e-26
Identity = 71/207 (34.30%), Postives = 103/207 (49.76%), Query Frame = 1
Query:   19 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPIS-VGMVGSASDFQLYT----SGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSL 624
            AP+ +D R+   VTP++ QG CGSCW+FS   A E          + L+EQELVDC  + +GC G  +    E++ +NG +  ES Y Y   + +C   +   +   I  Y  + P +   +  A+ Q  S + ++    D   +       I   D    P Y  HAV IVGY +  G DYWIV+NSW T+WG +GY Y   +  L
Sbjct:  108 APAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDC-ASQHGCHGDTIPRGIEYIQHNGVVQ-ESYYRYVAREQSCR--RPNAQRFGISNYCQIYPPNVNKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPNY--HAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDL 308          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.217e-25
Identity = 80/233 (34.33%), Postives = 109/233 (46.78%), Query Frame = 1
Query:   22 PSSLDWRK-----RGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTG--DLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCNITKEETKVVSID-----GYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYY-------IDHAVLIVGYGSE--NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAM 654
            P   DW       R  VTP+++QG CGSC++  +  A+E    LV+   +   LS Q +VDC   S GC+GG+          + G+  +   PYTG D G C ++K  T+  + D     GY          L      P  VG      DFQ Y  GIY+       +Y        +HAVL+VGYG +  +GE YW VKNSWG  WG  GYF I R T     +C + ++
Sbjct:  219 PLEFDWTSPPDGSRSPVTPIRNQGICGSCYASPSAAALEARIRLVSNFSEQPILSPQTVVDCSPYSEGCNGGFPFLIAGKYGEDFGLPQKIVIPYTGEDTGKCTVSKNCTRYYTTDYSYIGGYYGATNEKLMQLELISNGPFPVGFE-VYEDFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVDKLSGEPYWKVKNSWGVEWGEQGYFRILRGTD----ECGVESL 446          
The following BLAST results are available for this feature:
BLAST of DR406020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CATC_RAT5.637e-2937.34Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Cts... [more]
CATW_HUMAN9.616e-2933.93Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
CATL3_PARTE1.640e-2839.38Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]
CATC_MOUSE2.142e-2836.48Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
PEPT1_EURMA8.140e-2835.05Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]
CATC_CANFA8.140e-2835.68Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
CATW_MOUSE1.063e-2733.33Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATO_MOUSE9.000e-2732.68Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
PEPT1_DERPT4.467e-2634.30Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
CATC_SCHMA2.217e-2534.33Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248H16 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248H16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406020 ID=DR406020; Name=DR406020; organism=Citrus sinensis; type=EST; length=731bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGT
TCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGAC
CTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTA
TGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACA
ACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGGT
ACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTA
TAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAAC
AACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATAT
ACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTGA
TCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTATT
GGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTTT
TACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATGC
TATGGCTTCTTATCCAATCGAAGAATCCTATGCACCATCTCCCTATTCAC
CACCATCCGAGCCACCCCCGCTACCGTCACC
back to top