DR406020

Overview
NameDR406020
Unique NameDR406020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.424e-25
Identity = 73/218 (33.49%), Postives = 107/218 (49.08%), Query Frame = 1
Query:    1 GVQSCEA-----PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL---CAAVQQPISVGM-VGSASDFQLYTSG-IYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSL 624
            G Q+C+      P+ +D R  G VT +K+Q +CGSCW+FS    +E          + LSEQELVDC  + +GC G  +     ++  NG ++ +S YPY   +G C   +   K   I     + P +   +    A  Q  +SV + +     F+ Y    I   D      +  HA+ IVGYGS+ G  YWI++NSW T+WG  GY Y   D +L
Sbjct:   99 GAQACQIGAVNIPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDC-ASQHGCGGDTVLNGLRYIQKNGVVEEQS-YPYKAREGRCQ--RPNAKRYGIKDLCQIYPPNGDKIRTYLATKQAALSVIIGIRDLDSFRHYDGRTILQSDNGGKRNF--HAINIVGYGSKQGVRYWIIRNSWDTTWGDKGYGYFVADKNL 310          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 8.424e-25
Identity = 79/226 (34.96%), Postives = 108/226 (47.79%), Query Frame = 1
Query:    4 VQSCEAPSSLDWRKR--GIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGD--LISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPY----TGVDGTCNITKEETKVVSIDG------YKDVEPSDSALLCAAVQQPISVG-----MVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSEN-GEDYWIVKNSWGTSWGIDGYFYITRDTS 621
            V + +AP S D+R+     +  V DQG CGSCW+FS+  ++         D   +  S Q +V CD     CDGG++   + ++   G   T+   PY    TG  GTC      TK    DG      YK  +  D  L   A+ + ++ G          SDF  Y SG+Y            HAV +VGYG+++ G DYWI+KNSWG  WG DGYF I R T+
Sbjct:   69 VSATQAPDSFDFREEYPHCIPEVVDQGGCGSCWAFSSVASVGDRRCFAGLDKKAVKYSPQYVVSCDRGDMACDGGWLPSVWRFLTKTG-TTTDECVPYQSGSTGARGTC-----PTKCA--DGSDLPHLYKATKAVDYGLDAPAIMKALATGGPLQTAFTVYSDFMYYESGVYQHTYGRVEG--GHAVDMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRIIRMTN 284          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: GMSA_DICDI (Gamete and mating-type specific protein A OS=Dictyostelium discoideum GN=gmsA PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.201e-24
Identity = 75/204 (36.76%), Postives = 104/204 (50.98%), Query Frame = 1
Query:   19 APSS---LDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTG----DLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYIT 609
            AP+S   +DW      TP++DQG CGSCW+F+++ A+E    +  G      + LS Q  V+C   + GC+GG+    F +     GI  E D PY  V GT  IT           Y   E + +ALL    + P+++  V   S FQ Y SGIYN   +     I+H VL+VGY  +   D + +KNSWG+ WG  GY  IT
Sbjct:  237 APTSTLTVDWTS--YQTPIRDQGQCGSCWAFASSAALESRYLIKYGTAQKSTLQLSNQNAVNC--IASGCNGGWSGNYFNF-FKTPGIAYEKDDPYKAVTGTSCITTSSVARFKYTNYGYTEKTKAALLAELKKGPVTIA-VYVDSAFQNYKSGIYNS--ATKYTGINHLVLLVGY--DQATDAYKIKNSWGSWWGESGYMRIT 430          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.216e-23
Identity = 56/141 (39.72%), Postives = 83/141 (58.87%), Query Frame = 1
Query:  211 GGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENGE----DYWIVKNSWGTSWGIDGYFYITRD 615
            GG +D AF++V +NGG+D+E  YPY     +C   + E  V ++  Y D+   ++ L+   A   PIS  +  S   F+ Y  GI Y+  CS++   +DH VL+VGYG++  E     YWI+KNSWGT WG+DGY  + +D
Sbjct:    1 GGLIDDAFQYVKDNGGLDSEESYPYHAQGDSCKY-RPENSVANVTDYWDIPSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSED--VDHGVLVVGYGADGTETENKKYWIIKNSWGTDWGMDGYIKMAKD 138          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATB1_GIALA (Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=2 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 2.710e-23
Identity = 70/209 (33.49%), Postives = 98/209 (46.89%), Query Frame = 1
Query:   22 PSSLDWRKR--GIVTPVKDQGSCGSCWSFSTTGAIEGINAL--VTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTES----DYPYTGVDGTCNITKEETKVVSI---DGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGS-ENGEDYWIVKNSWGTSWGIDGYFYITR 612
            P   D+R      V P  DQGSCGSCW+FS  G          +  + +S S+Q L+ C   ++GCDGG     + ++   G    E     DY +T V   C    ++   + +    GY  V  S  A++   V       M+   +D   Y SG+Y            HA+ IVGYG+ ++G DYWI+KNSWG  WG +GYF I R
Sbjct:   80 PPQFDFRDEYPQCVKPALDQGSCGSCWAFSAIGVFGDRRCAMGIDKEAVSYSQQHLISCSLENFGCDGGDFQPTWSFLTFTGATTAECVKYVDYGHT-VASPCPAVCDDGSPIQLYKAHGYGQVSKSVPAIMGMLVAGGPLQTMIVVYADLSYYESGVYKHTYGTINLGF-HALEIVGYGTTDDGTDYWIIKNSWGPDWGENGYFRIVR 286          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATB2_GIALA (Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.884e-23
Identity = 76/224 (33.93%), Postives = 111/224 (49.55%), Query Frame = 1
Query:   16 EAPSSLDWRKR--GIVTPVKDQGSCGSCWSFSTTGAIEGINALVTG---DLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPY----TGVDGTCNIT----KEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYID--HAVLIVGYGSEN-GEDYWIVKNSWGTSWGIDGYFYITR---DTSLE 627
            + P S D+R+     +  V DQG CGSCW+FS+     G    V G     +  S Q +V CD     C+GG++   ++++   G   T+   PY    T + GTC         +  + +   YKD      A++ A +   P+ V  +   SDF  Y SG+Y         Y++  HAV +VGYG+++ G DYWI+KNSWG  WG DGYF + R   D S+E
Sbjct:   74 DVPESFDFREEYPHCIPEVVDQGGCGSCWAFSSVATF-GDRRCVAGLDKKPVKYSPQYVVSCDHGDMACNGGWLPNVWKFLTKTG-TTTDECVPYKSGSTTLRGTCPTKCADGSSKVHLATATSYKDYGLDIPAMMKALSTSGPLQVAFLVH-SDFMYYESGVYQHTYG----YMEGGHAVEMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRMIRGINDCSIE 290          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CTSB_DICDI (Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.049e-19
Identity = 66/228 (28.95%), Postives = 102/228 (44.74%), Query Frame = 1
Query:   34 DWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTE-----------SDYPYTGVDGTCNITKE----ETKVVSIDGYKDVE----PSDSALLCAAVQQPISVGMVGSA----SDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAIN 648
            +W     ++ +++Q  CGSCW+F  T +      +   + + LS  ++V CD T  GC+GG    A+ W+   G +  E           +  P      T + TKE     + + S D +K  +     SD A++    Q+ ++ G V +      DF  Y SG+Y      D     H V +VG+G+ NG DY+   N W TSWG +G F I R      G C I+
Sbjct:   88 NWPNCTTISQIQNQARCGSCWAFGATESATDRLCIHNNENVQLSFMDMVTCDETDNGCEGGDAFSAWNWLRKQGAVSEECLPYTIPTCPPAQQPCLNFVNTPSCTKECQSNSSLIYSQDKHKMAKIYSFDSDEAIM----QEIVTNGPVEACFTVFEDFLAYKSGVYVHTTGKD--LGGHCVKLVGFGTLNGVDYYAANNQWTTSWGDNGTFLIKR------GDCGIS 303          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CPR1_CAEEL (Gut-specific cysteine proteinase OS=Caenorhabditis elegans GN=cpr-1 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18
Identity = 64/224 (28.57%), Postives = 95/224 (42.41%), Query Frame = 1
Query:   25 SSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLIS--LSEQELVDCDTTSYG--CDGGYMDYAFEWVINNGGIDTESDYPYTG---------VDGTCNITKEETKVVSID-GYKDVEPSDSALLCAAVQQPISVGMVGSA--------------SDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITR 612
            S   W +   +  ++DQ +CGSCW+F     I     + T       +S  +L+ C  +S G  C+GGY   A  W  ++ G+ T  DY   G           G C  +K  +  +S   GY      D     +A   P +   + +                DF  Y SG+Y        Y   HA+ I+G+G+E+G  YW+V NSWG +WG  G+F I R
Sbjct:   91 SRTQWSECKSIKLIRDQATCGSCWAFGAAEMISDRTCIETKGAQQPIISPDDLLSCCGSSCGNGCEGGYPIQALRWW-DSKGVVTGGDYHGAGCKPYPIAPCTSGNCPESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSVYEDFYKYKSGVYKHTAGK--YLGGHAIKIIGWGTESGSPYWLVANSWGVNWGESGFFKIYR 311          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: YCF2E_CAEEL (Uncharacterized peptidase C1-like protein F26E4.3 OS=Caenorhabditis elegans GN=F26E4.3 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18
Identity = 72/236 (30.51%), Postives = 100/236 (42.37%), Query Frame = 1
Query:   16 EAPSSLDWRKRG--IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLIS--LSEQELVDCDT-TSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD----GTCNITKEE----------------TKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYN--------GDCSNDPYYIDHAVLIVGYGSENGED----YWIVKNSWGTSWGIDGYFYITR 612
            E P   D R +   ++ PV DQG CGS WS STT       A+++   I+  LS Q+L+ C+     GC+GGY+D A+ W I   G+  +  YPY        G C I K +                T       YK     +          P+    V    DF +Y  G+Y         G  S    Y  H+V ++G+G ++       YW+  NSWGT WG DGYF + R
Sbjct:  183 ELPEHFDARDKWGPLIHPVADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLSSQQLLSCNQHRQKGCEGGYLDRAW-WYIRKLGVVGDHCYPYVSGQSREPGHCLIPKRDYTNRQGLRCPSGSQDSTAFKMTPPYKVSSREEDIQTELMTNGPVQATFVVH-EDFFMYAGGVYQHSDLAAQKGASSVAEGY--HSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLR 414          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CATB_MACFA (Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 70/245 (28.57%), Postives = 106/245 (43.27%), Query Frame = 1
Query:    7 QSCEAPSSLD----WRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISL--SEQELVDCD--TTSYGCDGGYMDYAFEW-----VINNGGIDTE-----------------SDYPYTGVDGTCNITK----------EETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYN---GDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITR 612
            +  + P S D    W +   +  ++DQGSCGSCW+F    AI     + T   +S+  S ++L+ C       GC+GGY   A+ +     +++ G  D+                  S  P TG   T   +K          ++ K    + Y  V  S+  ++    +     G     SDF LY SG+Y    G+         HA+ I+G+G ENG  YW+V NSW T WG +G+F I R
Sbjct:   76 EDLKLPESFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGIMCGDGCNGGYPAGAWNFWTRKGLVSGGLYDSHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYS-VSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGG-----HAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILR 314          
The following BLAST results are available for this feature:
BLAST of DR406020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
PEPT1_PSOOV8.424e-2533.49Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
CATB3_GIALA8.424e-2534.96Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
GMSA_DICDI3.201e-2436.76Gamete and mating-type specific protein A OS=Dicty... [more]
CATL1_FELCA1.216e-2339.72Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE... [more]
CATB1_GIALA2.710e-2333.49Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=... [more]
CATB2_GIALA7.884e-2333.93Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=... [more]
CTSB_DICDI4.049e-1928.95Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE... [more]
CPR1_CAEEL1.178e-1828.57Gut-specific cysteine proteinase OS=Caenorhabditis... [more]
YCF2E_CAEEL5.847e-1830.51Uncharacterized peptidase C1-like protein F26E4.3 ... [more]
CATB_MACFA3.790e-1728.57Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248H16 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248H16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406020 ID=DR406020; Name=DR406020; organism=Citrus sinensis; type=EST; length=731bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGT
TCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGAC
CTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTA
TGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACA
ACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGGT
ACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTA
TAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAAC
AACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATAT
ACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTGA
TCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTATT
GGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTTT
TACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATGC
TATGGCTTCTTATCCAATCGAAGAATCCTATGCACCATCTCCCTATTCAC
CACCATCCGAGCCACCCCCGCTACCGTCACC
back to top