DR406011

Overview
NameDR406011
Unique NameDR406011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length387
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.115e-17
Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = 3
Query:   12 GFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            GF++EAI+REH+PE   D+LA+ CGPPPMIQFAVQPNLEKM YD K+ LLVF
Sbjct:  839 GFITEAIMREHLPEASSDSLAMTCGPPPMIQFAVQPNLEKMGYDIKNDLLVF 890          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA1_SOYBN (Inducible nitrate reductase [NADH] 1 OS=Glycine max GN=INR1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.115e-17
Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++E+IL EH+P    DTLAL CGPPPMIQFAVQPNLEK+ YDT+++LLVF
Sbjct:  833 SVGFITESILTEHIPNASPDTLALTCGPPPMIQFAVQPNLEKLGYDTQNNLLVF 886          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA_LOTJA (Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.374e-17
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++E ++REH+PE   D LALACGPPPMIQFAV PNLEKM YD K+ LLVF
Sbjct:  847 SVGFVTEGVMREHLPEAGDDALALACGPPPMIQFAVNPNLEKMGYDVKNDLLVF 900          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA2_BRANA (Nitrate reductase [NADH], clone PBNBR1412 OS=Brassica napus GN=NIA2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.167e-17
Identity = 39/55 (70.91%), Postives = 48/55 (87.27%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXX-DTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            STGF++E +LREHVPEG   ++LALACGPPPMIQFA+QPNLEKM Y+ K+ LL+F
Sbjct:  857 STGFITEPVLREHVPEGLEGESLALACGPPPMIQFALQPNLEKMGYNVKEDLLIF 911          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.167e-17
Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++E+ILREHVP    DTLAL CGPPPMIQFAVQPNLEK+ YD ++ LLVF
Sbjct:  828 SVGFITESILREHVPLASPDTLALTCGPPPMIQFAVQPNLEKLGYDIQNDLLVF 881          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA1_ORYSJ (Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. japonica GN=NIA1 PE=2 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 9.167e-17
Identity = 38/52 (73.08%), Postives = 44/52 (84.62%), Query Frame = 3
Query:   12 GFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            GF++E +LREHVPEG  DTLALACGPPPMI+FAV PNLEKM YD  +S +VF
Sbjct:  865 GFVTEEVLREHVPEGGDDTLALACGPPPMIKFAVSPNLEKMKYDMANSFIVF 916          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA2_ARATH (Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana GN=NIA2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.667e-16
Identity = 38/55 (69.09%), Postives = 47/55 (85.45%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDT-LALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            STGF+SEAI+REH+P+G   + LA+ACGPPPMIQFAVQPNLEKM Y+ K+  L+F
Sbjct:  863 STGFISEAIMREHIPDGLDGSALAMACGPPPMIQFAVQPNLEKMQYNIKEDFLIF 917          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA_SPIOL (Nitrate reductase [NADH] OS=Spinacia oleracea GN=NIA PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.942e-16
Identity = 37/53 (69.81%), Postives = 43/53 (81.13%), Query Frame = 3
Query:    9 TGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            TGF+SE ILR+HVP    D LAL CGPPPMIQFAVQPNL+KM +D K+ LL+F
Sbjct:  874 TGFISEKILRDHVPAVGDDVLALTCGPPPMIQFAVQPNLDKMGFDIKEQLLIF 926          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA2_HORVU (Nitrate reductase [NADH] (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.014e-15
Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++E ILR HVPEG  DTLALACGPPPMI+FA+ PNLEKM YD  +S + F
Sbjct:  859 SVGFVTEDILRAHVPEGGDDTLALACGPPPMIKFAISPNLEKMKYDMANSFISF 912          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.014e-15
Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++E ILR HVPEG  DTLALACGPPPMI+FA+ PNLEKM YD  +S + F
Sbjct:  862 SVGFVTEDILRAHVPEGGDDTLALACGPPPMIKFAISPNLEKMKYDMANSFISF 915          
The following BLAST results are available for this feature:
BLAST of DR406011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
NIA2_PHAVU4.115e-1773.08Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]
NIA1_SOYBN4.115e-1770.37Inducible nitrate reductase [NADH] 1 OS=Glycine ma... [more]
NIA_LOTJA5.374e-1770.37Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA... [more]
NIA2_BRANA9.167e-1770.91Nitrate reductase [NADH], clone PBNBR1412 OS=Brass... [more]
NIA1_PHAVU9.167e-1772.22Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
NIA1_ORYSJ9.167e-1773.08Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. ... [more]
NIA2_ARATH2.667e-1669.09Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana... [more]
NIA_SPIOL5.942e-1669.81Nitrate reductase [NADH] OS=Spinacia oleracea GN=N... [more]
NIA2_HORVU1.014e-1568.52Nitrate reductase [NADH] (Fragment) OS=Hordeum vul... [more]
NIA1_HORVU1.014e-1568.52Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248H07 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406011 ID=DR406011; Name=DR406011; organism=Citrus sinensis; type=EST; length=387bp
GGGACAGTACGGGATTCCTTTCAGAAGCAATCCTCAGGGAGCACGTCCCA
GAAGGNNNNNNNGATACTCTTGCATTGGCGTGTGGGCCTCCTCCGATGAT
TCAATTTGCCGTGCAGCCGAATTTGGAGAAAATGAACTACGATACCAAGG
ATTCGTTGCTGGTGTTTTAAATTAAACGCTGGGGGCAAGCACAGACGACG
ATACCAGCCGAGGTTGTACATATTTAAACGTCGAAGTTTTCAGCAGCAGT
TAAGTACTGCGTCACTCTATAGAGTCTATAAATAAATTCTCCCCGATCAA
TAACAAAAAAAAAAAAAATAAAAAATTAAAAATAAAAAAAAAAAAAAAAA
AAAAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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