DR406002

Overview
NameDR406002
Unique NameDR406002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: MLRV_RAT (Myosin regulatory light chain 2, ventricular/cardiac muscle isoform OS=Rattus norvegicus GN=Myl2 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 48/151 (31.79%), Postives = 77/151 (50.99%), Query Frame = 3
Query:    9 GRRKMADQLTDDQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            G   +       Q  EFKEAF++ D++ DG I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G + A  +R ++T   E+ + EE+D+M      D  G ++Y+  V ++
Sbjct:   13 GSSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGSLKADYVREMLTTQAERFSKEEIDQMFAAFPPDVTGNLDYKNLVHII 159          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: MLRV_MOUSE (Myosin regulatory light chain 2, ventricular/cardiac muscle isoform OS=Mus musculus GN=Myl2 PE=2 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 48/151 (31.79%), Postives = 77/151 (50.99%), Query Frame = 3
Query:    9 GRRKMADQLTDDQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            G   +       Q  EFKEAF++ D++ DG I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G + A  +R ++T   E+ + EE+D+M      D  G ++Y+  V ++
Sbjct:   13 GSSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGSLKADYVREMLTTQAERFSKEEIDQMFAAFPPDVTGNLDYKNLVHII 159          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: CML21_ORYSJ (Probable calcium-binding protein CML21 OS=Oryza sativa subsp. japonica GN=CML21 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 58/158 (36.71%), Postives = 83/158 (52.53%), Query Frame = 3
Query:   45 QTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQN----PTEAELQDMINEVDADGNGTIDFPEFLNL------------MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 464
            +T   +  F +FD+DGDG IT  EL   +  LG      P  A L  ++    A G   + F EF  L            +A    + + E +++EAF VFD+D +G+ISAAEL+ V++ +G  E      V +MI  AD D DG+++YEEF K MMA
Sbjct:   38 ETLRLRRVFEMFDRDGDGVITPAELSGALCRLGARGEAPPAAAALDAVVAAYIAPGMAGLRFAEFEALHAELAGLGGRQAVAAAEAEEEKEADMREAFGVFDEDGDGYISAAELQAVLSRMGLPEAACMARVRDMIAAADRDSDGRVDYEEF-KAMMA 194          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: MLR_AEQIR (Myosin regulatory light chain, striated adductor muscle OS=Aequipecten irradians PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16
Identity = 43/143 (30.07%), Postives = 82/143 (57.34%), Query Frame = 3
Query:   30 QLTDDQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            +L   Q  E KEAFS+ D D DG ++ +++  +   LG+ P + EL  M+ E      G ++F  FL++ + K+  TDSEE ++ AF +FD+ +   ++   ++ ++ N+G+    +E+    +EA V+G G+ +Y +F  ++
Sbjct:   12 KLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 149          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: MLRV_RABIT (Myosin regulatory light chain 2, ventricular/cardiac muscle isoform OS=Oryctolagus cuniculus GN=MYL2 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16
Identity = 46/139 (33.09%), Postives = 75/139 (53.96%), Query Frame = 3
Query:   45 QTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            Q  EFKEAF++ D++ DG I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G + A  +R ++T   E+ + +E+D+M      D  G ++Y+  V ++
Sbjct:   25 QIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVREMLTTQAERFSKDEIDQMFAAFPPDVTGNLDYKNLVHII 159          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: CML34_ARATH (Probable calcium-binding protein CML34 OS=Arabidopsis thaliana GN=CML34 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16
Identity = 48/134 (35.82%), Postives = 74/134 (55.22%), Query Frame = 3
Query:   60 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 461
            K  F  FDK+ DG ++  E   V  +     T+ ++     E+D DGNG ++  EF + +         E+ LKE F   D D +G I A+E    MT+LG+K T+E   E +R ADVDGDG +N++EF+ +++
Sbjct:    4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI---------EKMLKEVFVFCDVDGDGKIPASESYVTMTSLGKKFTEETSAEKVRAADVDGDGYLNFDEFMALVI 128          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: SPE2D_STRPU (Calcium-binding protein SPEC 2D OS=Strongylocentrotus purpuratus GN=SPEC2D PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.361e-16
Identity = 49/143 (34.27%), Postives = 81/143 (56.64%), Query Frame = 3
Query:   36 TDDQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKD-QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 461
            ++DQ  E+K  F  FD++ DG   T  LG  M+S+G   T AEL++          GT  FP+FL ++  K        + ++ F+  DKD ++  +SA E+R  M +   ++T++++ EMI +AD   DG+ + EEFVK++M
Sbjct:    8 SEDQIKEYKTKFDAFDRNNDGNFPTMFLGNAMKSVGHVLTAAELENSRRV----RKGTTTFPQFLAMILDK--------KCRKVFKAMDKDDKDKLLSADEVRQAMLSFDRQITEDKIKEMIEKADFPNDGKCSLEEFVKMVM 138          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: MLR_CHLNI (Myosin regulatory light chain, striated adductor muscle OS=Chlamys nipponensis akazara PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.361e-16
Identity = 45/143 (31.47%), Postives = 80/143 (55.94%), Query Frame = 3
Query:   30 QLTDDQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            +L   Q  E KEAFS+ D D DG +   +L  +   LG+ P + EL  M+ E      G ++F  FL++ + K+  TDSEE ++ AF +FD+ +   ++   ++ ++ N+G+  T +E+    +EA V G G+ +Y +F  ++
Sbjct:   11 KLPQKQIQEMKEAFSMLDVDRDGFVNKDDLKAISEQLGRTPDDKELTAMLKEAP----GPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDELETKKLNIEYIKDLLENMGDNFTKDEMRMTFKEAPVTG-GKFDYVKFTAMI 148          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: MLRV_BOVIN (Myosin regulatory light chain 2, ventricular/cardiac muscle isoform OS=Bos taurus GN=MYL2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.361e-16
Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 3
Query:   45 QTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            Q  EFKEAF++ D++ DG I   +L     +LG+ N    E+ +M+ E      G I+F  FL +   K+K  D EE +  AF+VFD +  G + A  ++ ++T   E+ + EE+D+M      D  G ++Y+  V ++
Sbjct:   25 QIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMLKEAP----GPINFTVFLQMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYIKEMLTTQAERFSKEEIDQMFAAFPPDVTGNLDYKNLVHII 159          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: CDPKM_ARATH (Calcium-dependent protein kinase 22 OS=Arabidopsis thaliana GN=CPK22 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.361e-16
Identity = 50/147 (34.01%), Postives = 82/147 (55.78%), Query Frame = 3
Query:   21 MADQLTDDQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE-EVDEMIREADVDGDGQINYEEFVKVM 458
            +A+ L++++    K  F   D D  G IT +EL   +   G   +E E++ ++   D DGNGTID+ EF++    + +  + +E L +AF+ FDKD +G I+  E+   M   G  + DE    ++I E D + DG+I+YEEF  +M
Sbjct:  339 IAEGLSEEEIKGLKTMFENMDMDKSGSITYEELKMGLNRHGSKLSETEVKQLMEAADVDGNGTIDYIEFISATMHRHR-LERDEHLYKAFQYFDKDGSGHITKEEVEIAMKEHG--MGDEANAKDLISEFDKNNDGKIDYEEFCTMM 482          
The following BLAST results are available for this feature:
BLAST of DR406002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
MLRV_RAT8.116e-1731.79Myosin regulatory light chain 2, ventricular/cardi... [more]
MLRV_MOUSE8.116e-1731.79Myosin regulatory light chain 2, ventricular/cardi... [more]
CML21_ORYSJ8.116e-1736.71Probable calcium-binding protein CML21 OS=Oryza sa... [more]
MLR_AEQIR1.808e-1630.07Myosin regulatory light chain, striated adductor m... [more]
MLRV_RABIT1.808e-1633.09Myosin regulatory light chain 2, ventricular/cardi... [more]
CML34_ARATH1.808e-1635.82Probable calcium-binding protein CML34 OS=Arabidop... [more]
SPE2D_STRPU2.361e-1634.27Calcium-binding protein SPEC 2D OS=Strongylocentro... [more]
MLR_CHLNI2.361e-1631.47Myosin regulatory light chain, striated adductor m... [more]
MLRV_BOVIN2.361e-1632.37Myosin regulatory light chain 2, ventricular/cardi... [more]
CDPKM_ARATH2.361e-1634.01Calcium-dependent protein kinase 22 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248G21 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248G21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406002 ID=DR406002; Name=DR406002; organism=Citrus sinensis; type=EST; length=718bp
GGGGAAACGGAAGAAGAAAAATGGCGGATCAGCTCACGGACGATCAGACC
TCTGAGTTCAAAGAGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTG
CATTACCACCAAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACC
CCACTGAGGCTGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGT
AATGGAACTATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGAT
GAAGGATACCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCG
ACAAGGATCAGAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATG
ACAAACCTAGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAG
GGAAGCTGATGTTGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCA
AGGTTATGATGGCCAAGTAATGACCCCAACCCACCAATACTTATAAAATG
GGTTGACTAAATTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTA
ATTTGATAGTCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGG
TGATGGGCCTGATGGTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTC
TTGTGACTCGCAAAACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCTGT
TCTGCAAAAAAAAAAAAA
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