DR406002

Overview
NameDR406002
Unique NameDR406002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: CABP7_HUMAN (Calcium-binding protein 7 OS=Homo sapiens GN=CABP7 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15
Identity = 44/125 (35.20%), Postives = 75/125 (60.00%), Query Frame = 3
Query:   33 LTDDQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEEL--KEAFRVFDKDQNGFISAAELRHVM-TNLGEKLTDEEVDEMI 398
            + +D+  E +EAF +FD+DG+G I+ +ELGT MRSLG  P E EL+ +I  +D DG+G +DF EF+ L+  K+  +   E+    +   VF K     ++  EL+ ++     E L+ ++++ +I
Sbjct:   30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLSMKDIENII 154          

HSP 2 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 33/69 (47.83%), Postives = 49/69 (71.01%), Query Frame = 3
Query:  261 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 467
            D  EE++EAF+VFD+D NGFIS  EL   M +LG    + E++ +I+  D+DGDGQ+++EEFV ++  K
Sbjct:   33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPK 101          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: MLRA_PATYE (Myosin regulatory light chain A, smooth adductor muscle OS=Patinopecten yessoensis PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 43/135 (31.85%), Postives = 78/135 (57.78%), Query Frame = 3
Query:   54 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            E KEAF++ D++ DG I   +L  +  SLG+ P + EL  M+ E      G ++F  FL++ + K+  TD+EE L+ AF +FD+     ++   ++ ++ N+G+  T +E+    +EA V G G+ +Y +F  ++
Sbjct:   24 EMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP----GPLNFTMFLSIFSDKLSGTDTEETLRNAFAMFDELDTKKLNIEYIKDLLENMGDNFTKDEMRMTFKEAPVTG-GKFDYVKFTAMI 153          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: MLRA_HUMAN (Myosin regulatory light chain 2, atrial isoform OS=Homo sapiens GN=MYL7 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 3
Query:   45 QTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            Q  EFKEAFS  D++ DG I   +L      LG+ +  E EL  M+ E    G G I+F  FL L   K+  TD EE +  AFR+FD    G ++  E + ++    +K +  EV++M     +D  G I+Y+    ++
Sbjct:   33 QIQEFKEAFSCIDQNRDGIICKADLRETYSQLGKVSVPEEELDAMLQE----GKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKGVVNKDEFKQLLLTQADKFSPAEVEQMFALTPMDLAGNIDYKSLCYII 167          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: CANB_SCHPO (Calcineurin subunit B OS=Schizosaccharomyces pombe GN=cnb1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 49/146 (33.56%), Postives = 81/146 (55.48%), Query Frame = 3
Query:   36 TDDQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            ++++    ++ F   D +  G I   E  ++  S+  NP  + L    + VD DG G +DF EF+N ++      + EE+LK AF+++D D++G+IS  EL  V+     TNL E    + VD+ I E D D DG+I++EEF  ++
Sbjct:   19 SNEEIERIRKRFIKIDANQSGSIDRNEFLSIP-SVASNPLASRL---FSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEFKDIV 160          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: CANB_KLULA (Calcineurin subunit B OS=Kluyveromyces lactis GN=CNB1 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 51/161 (31.68%), Postives = 85/161 (52.80%), Query Frame = 3
Query:    3 GNGRRKMADQLTDD------QTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 452
            G    ++ D L DD      +    K+ F   DKD  G I   E  ++   +  NP    + ++ +E   D +G +DF EF+  ++      +++ +L+ AFR++D D++G+IS  EL  V+     TNL ++   + VD  I E DVDGDG++++EEF K
Sbjct:    2 GAAPSRIVDNLLDDTNFDRAEIERLKKRFMKLDKDSSGSIDKTEFMSIP-GVSANPLAKRIIEVFDE---DNSGDVDFQEFITSLSIFSGRGETDAKLRFAFRIYDIDKDGYISNGELFIVLKIMVGTNLEDEQLQQIVDRTIMENDVDGDGKLSFEEFKK 158          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: MLRA_MOUSE (Myosin regulatory light chain 2, atrial isoform OS=Mus musculus GN=Myl7 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 3
Query:   45 QTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            Q  EFKEAFS  D++ DG I   +L      LG+ +  E EL  M+ E    G G I+F  FL L   K+  TD EE +  AFR+FD    G ++  E + ++    +K +  EV+++     +D  G I+Y+    ++
Sbjct:   33 QIQEFKEAFSCIDQNRDGIICKSDLKETYSQLGRVSVPEEELDAMLQE----GKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGQGVVNKEEFKQLLMTQADKFSPAEVEQLFALTPMDLAGNIDYKSLCYII 167          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: MLRA_CHICK (Myosin regulatory light chain 2A, cardiac muscle isoform OS=Gallus gallus PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 49/139 (35.25%), Postives = 73/139 (52.52%), Query Frame = 3
Query:   45 QTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            Q  EFKEAF++ D++ DG I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G  SA     +MT  G + + EE+D+M      D  G ++Y+  V V+
Sbjct:   25 QIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGLKSAYIKEMLMTQEG-RFSQEEIDQMFAAFPPDVSGNLDYKNLVHVI 158          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: CANB_YARLI (Calcineurin subunit B OS=Yarrowia lipolytica GN=CNB1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 47/142 (33.10%), Postives = 80/142 (56.34%), Query Frame = 3
Query:   36 TDDQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEF 446
            + D+    ++ F   D D  G + T E  + +  +  NP  + L D+ +E   + +G +DF EF+N ++      + +E+L+ AF+V+D D++G+IS  EL  V+      NL +    + VD+ I EAD DGDG+I++EEF
Sbjct:   18 SSDEIDRLRKRFMKLDTDASGILETNEFLS-LPGVAANPLASRLMDVFDE---NHSGDVDFQEFINGLSTFSTKGNKKEKLRFAFKVYDIDRDGYISNGELFIVLKMMVGNNLKDAQLQQIVDKTIMEADKDGDGKISFEEF 155          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: CANB2_RAT (Calcineurin subunit B type 2 OS=Rattus norvegicus GN=Ppp3r2 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 51/152 (33.55%), Postives = 78/152 (51.32%), Query Frame = 3
Query:   18 KMADQLTDDQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            +M      D+      +F   D D  G ++  E  + +  L QNP    + D+    D DGNG +DF EF+   ++     D E++L+ AFR++D D +GFIS  EL  V+      NL +    + VD+ I   D DGDG+I++EEF  V+
Sbjct:   10 EMGTHFDHDEIKRLGRSFKKMDLDKSGSLSVDEFMS-LPELQQNPLVGRVIDIF---DTDGNGEVDFREFIVGTSQFSVKGDEEQKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDWQLQQLVDKSILVLDKDGDGRISFEEFRDVV 157          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: MLR_DROME (Myosin regulatory light chain 2 OS=Drosophila melanogaster GN=Mlc2 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 48/144 (33.33%), Postives = 75/144 (52.08%), Query Frame = 3
Query:   45 QTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 467
            Q +EFKEAF L D D DG I   +L     S+G+   + EL  M+ E     +G I+F + L L A +M  +   D +E +  AF+ FD D  G I   + R ++ N G+K T +EVD+   +  +D   QI+    ++++  K
Sbjct:   76 QIAEFKEAFQLMDADKDGIIGKNDLRAAFDSVGKIANDKELDAMLGE----ASGPINFTQLLTLFANRMATSGANDEDEVVIAAFKTFDND--GLIDGDKFREMLMNFGDKFTMKEVDDAYDQMVIDDKNQIDTAALIEMLTGK 213          
The following BLAST results are available for this feature:
BLAST of DR406002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
CABP7_HUMAN5.816e-1535.20Calcium-binding protein 7 OS=Homo sapiens GN=CABP7... [more]
MLRA_PATYE7.596e-1531.85Myosin regulatory light chain A, smooth adductor m... [more]
MLRA_HUMAN7.596e-1533.81Myosin regulatory light chain 2, atrial isoform OS... [more]
CANB_SCHPO7.596e-1533.56Calcineurin subunit B OS=Schizosaccharomyces pombe... [more]
CANB_KLULA7.596e-1531.68Calcineurin subunit B OS=Kluyveromyces lactis GN=C... [more]
MLRA_MOUSE9.921e-1533.09Myosin regulatory light chain 2, atrial isoform OS... [more]
MLRA_CHICK9.921e-1535.25Myosin regulatory light chain 2A, cardiac muscle i... [more]
CANB_YARLI9.921e-1533.10Calcineurin subunit B OS=Yarrowia lipolytica GN=CN... [more]
CANB2_RAT9.921e-1533.55Calcineurin subunit B type 2 OS=Rattus norvegicus ... [more]
MLR_DROME1.296e-1433.33Myosin regulatory light chain 2 OS=Drosophila mela... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248G21 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248G21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406002 ID=DR406002; Name=DR406002; organism=Citrus sinensis; type=EST; length=718bp
GGGGAAACGGAAGAAGAAAAATGGCGGATCAGCTCACGGACGATCAGACC
TCTGAGTTCAAAGAGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTG
CATTACCACCAAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACC
CCACTGAGGCTGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGT
AATGGAACTATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGAT
GAAGGATACCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCG
ACAAGGATCAGAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATG
ACAAACCTAGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAG
GGAAGCTGATGTTGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCA
AGGTTATGATGGCCAAGTAATGACCCCAACCCACCAATACTTATAAAATG
GGTTGACTAAATTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTA
ATTTGATAGTCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGG
TGATGGGCCTGATGGTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTC
TTGTGACTCGCAAAACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCTGT
TCTGCAAAAAAAAAAAAA
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