DR406002

Overview
NameDR406002
Unique NameDR406002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: CDPKS_ARATH (Calcium-dependent protein kinase 28 OS=Arabidopsis thaliana GN=CPK28 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11
Identity = 42/154 (27.27%), Postives = 85/154 (55.19%), Query Frame = 3
Query:   15 RKMADQLTDDQTSEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN--LMARKMKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            R +A  L + + S+ ++ F   D D +G I+ +E+   + + L     ++ + +++  +D++ +G +DF EF+   L   ++++ DSE+     + AF  FD D++G+I+  ELR      G       +D ++ EAD+D DG+I+  EF +++
Sbjct:  356 RALASTLDEAEISDLRDQFDAIDVDKNGVISLEEMRQALAKDLPWKLKDSRVAEILEAIDSNTDGLVDFTEFVAAALHVHQLEEHDSEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLRGS------IDPLLDEADIDRDGKISLHEFRRLL 503          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: EFCB2_HUMAN (EF-hand calcium-binding domain-containing protein 2 OS=Homo sapiens GN=EFCAB2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 40/105 (38.10%), Postives = 60/105 (57.14%), Query Frame = 3
Query:   54 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGTIDFPEFLNLMARKMKDTD----SEEELKEAFRVFDKDQNGFISAAELRHVMT 353
            + KEAF +FD + +  +  +E+GT++RSLG  PTE EL D+I EV + +  G I F +FL +M   + +       E+ L  AF V D  + GF++  EL   MT
Sbjct:  154 KIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMT 258          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: SCMC2_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11
Identity = 35/126 (27.78%), Postives = 70/126 (55.56%), Query Frame = 3
Query:   69 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 446
            F   D + DG I   +L   ++ LG + TE EL+ ++   D D +G +DF EF++ +       D E++L+  F+  DK  +G I A E+   + +LG  +++++ +++++  D +G   I++ E+
Sbjct:   65 FQELDVNKDGAICINDLAVGLKRLGVHRTELELRKIVKAGDKDQDGQLDFDEFVHYL------RDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVNISEQQAEKILKSMDKNGTMTIDWNEW 184          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: EFH52_TRYCR (EF-hand protein 5 variant 2 OS=Trypanosoma cruzi PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11
Identity = 38/126 (30.16%), Postives = 74/126 (58.73%), Query Frame = 3
Query:  102 ITTKELGTVMRSLGQNPTEAELQD---MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD-GDGQINYEEFVKVMMAK 467
            I +K++  +M+++G + TE E  D   +I + +      + F +FL LM R++ DT ++E L+ AF  +DK + G+++  +   +   L E+ T EE++E++  A+VD  D +I+Y  FV  + ++
Sbjct:   80 IPSKDVYALMQNVGMHLTEEEFHDALRVIGQSEPQNADELSFSDFLLLMTREVDDTMADE-LRSAFFHYDKHKTGYVTRKQFTELFATLAERSTPEELEELLAVAEVDETDDKIDYNRFVNELTSR 204          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: CDPK1_ORYSJ (Calcium-dependent protein kinase isoform 1 OS=Oryza sativa subsp. japonica GN=SPK PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11
Identity = 45/148 (30.41%), Postives = 77/148 (52.03%), Query Frame = 3
Query:   21 MADQLTDDQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 464
            +A++L++++    +E F   D      +T  EL  + R       + E+ D++   D D   TI++ EF+   A  +   + E+ L  AF  FDKD +GFI+  +L+     +   + D  ++EMI E D + DGQI+Y EFV +M +
Sbjct:  367 IAERLSEEEIVGLREMFKAMDTKNRSVVTFGELKGLKR-YSSVFKDTEINDLMEAAD-DTTSTINWEEFI-AAAVSLNKIEREKHLMAAFTYFDKDGSGFITVDKLQKAC--MERNMEDTFLEEMILEVDQNNDGQIDYAEFVTMMQS 509          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 35/135 (25.93%), Postives = 74/135 (54.81%), Query Frame = 3
Query:   42 DQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 446
            +Q + ++  F   D++GDG +   EL   +R+LG    +   + +    D + +G +DF EF+  +       D E+++K AF+  DK+ +G I A+E+   +  LG  +++++ + +++  DVDG   +++ E+
Sbjct:   19 EQPTRYETLFQALDRNGDGVVDIGELQEGLRNLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLK------DHEKKMKLAFKSLDKNNDGKIEASEIVQSLQTLGLTISEQQAELILQSIDVDGTMTVDWNEW 147          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 35/126 (27.78%), Postives = 70/126 (55.56%), Query Frame = 3
Query:   69 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 446
            F   D + DG I   +L   ++ LG + TE EL+ ++   D D +G +DF EF++ +       D E++L+  F+  DK  +G I A E+   + +LG  +++++ +++++  D +G   I++ E+
Sbjct:   64 FQELDVNKDGGICINDLAVGLKRLGVHRTELELRKIVKAGDKDQDGQLDFEEFVHYL------RDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVNISEQQAEKILKSMDKNGTMTIDWNEW 183          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: CDPKI_ARATH (Calcium-dependent protein kinase 18 OS=Arabidopsis thaliana GN=CPK18 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 43/154 (27.92%), Postives = 85/154 (55.19%), Query Frame = 3
Query:   15 RKMADQLTDDQTSEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTIDFPEFL--NLMARKMKDTDSE---EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 458
            R +A  + +D+  + ++ F   D D +G I+ +E+   + + +     +A + +++   D++ +G +DF EF+   L   ++++ DSE   +  + AF  FD D +GFI+  ELR + T L        ++ ++ EADVD DG+I+  EF +++
Sbjct:  365 RALAKTINEDELDDLRDQFDAIDIDKNGSISLEEMRQALAKDVPWKLKDARVAEILQANDSNTDGLVDFTEFVVAALHVNQLEEHDSEKWQQRSRAAFDKFDIDGDGFITPEELR-LQTGL-----KGSIEPLLEEADVDEDGRISINEFRRLL 512          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: ACTN2_HUMAN (Alpha-actinin-2 OS=Homo sapiens GN=ACTN2 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 35/106 (33.02%), Postives = 63/106 (59.43%), Query Frame = 3
Query:   24 ADQLTDDQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 341
            A  +T +Q +EF+ +F+ FD+  +G +  ++    + S+G +  EAE   ++  VD +G GT+ F  F++ M R+  DTD+ E++  +FR+   D+  +I A ELR
Sbjct:  747 AKGITQEQMNEFRASFNHFDRRKNGLMDHEDFRACLISMGYDLGEAEFARIMTLVDPNGQGTVTFQSFIDFMTRETADTDTAEQVIASFRILASDK-PYILAEELR 851          
BLAST of DR406002 vs. ExPASy Swiss-Prot
Match: ACTN2_BOVIN (Alpha-actinin-2 OS=Bos taurus GN=ACTN2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 35/106 (33.02%), Postives = 63/106 (59.43%), Query Frame = 3
Query:   24 ADQLTDDQTSEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 341
            A  +T +Q +EF+ +F+ FD+  +G +  ++    + S+G +  EAE   ++  VD +G GT+ F  F++ M R+  DTD+ E++  +FR+   D+  +I A ELR
Sbjct:  747 AKGITQEQMNEFRASFNHFDRRKNGLMDHEDFRACLISMGYDLGEAEFARIMTLVDPNGQGTVTFQSFIDFMTRETADTDTAEQVIASFRILASDK-PYILAEELR 851          
The following BLAST results are available for this feature:
BLAST of DR406002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
CDPKS_ARATH2.287e-1127.27Calcium-dependent protein kinase 28 OS=Arabidopsis... [more]
EFCB2_HUMAN2.987e-1138.10EF-hand calcium-binding domain-containing protein ... [more]
SCMC2_XENLA3.901e-1127.78Calcium-binding mitochondrial carrier protein SCaM... [more]
EFH52_TRYCR3.901e-1130.16EF-hand protein 5 variant 2 OS=Trypanosoma cruzi P... [more]
CDPK1_ORYSJ3.901e-1130.41Calcium-dependent protein kinase isoform 1 OS=Oryz... [more]
SCMC1_HUMAN6.655e-1125.93Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC2_XENTR8.691e-1127.78Calcium-binding mitochondrial carrier protein SCaM... [more]
CDPKI_ARATH8.691e-1127.92Calcium-dependent protein kinase 18 OS=Arabidopsis... [more]
ACTN2_HUMAN8.691e-1133.02Alpha-actinin-2 OS=Homo sapiens GN=ACTN2 PE=1 SV=1[more]
ACTN2_BOVIN8.691e-1133.02Alpha-actinin-2 OS=Bos taurus GN=ACTN2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248G21 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248G21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406002 ID=DR406002; Name=DR406002; organism=Citrus sinensis; type=EST; length=718bp
GGGGAAACGGAAGAAGAAAAATGGCGGATCAGCTCACGGACGATCAGACC
TCTGAGTTCAAAGAGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTG
CATTACCACCAAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACC
CCACTGAGGCTGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGT
AATGGAACTATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGAT
GAAGGATACCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCG
ACAAGGATCAGAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATG
ACAAACCTAGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAG
GGAAGCTGATGTTGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCA
AGGTTATGATGGCCAAGTAATGACCCCAACCCACCAATACTTATAAAATG
GGTTGACTAAATTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTA
ATTTGATAGTCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGG
TGATGGGCCTGATGGTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTC
TTGTGACTCGCAAAACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCTGT
TCTGCAAAAAAAAAAAAA
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