DR406000

Overview
NameDR406000
Unique NameDR406000
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length387
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR406000 vs. ExPASy Swiss-Prot
Match: NIA_BETVE (Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN=NIA1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.760e-13
Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 3 
Query:    6 STGFLIEAILREHVPXXXGDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S G++ E+ILREH+P    D LALACG P MI+ AV+ NLEKMNYDTK+SL++F
Sbjct:  845 SVGYIRESILREHIPEGSDDVLALACGAPSMIEEAVRLNLEKMNYDTKNSLIIF 898
The following BLAST results are available for this feature:
BLAST of DR406000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
NIA_BETVE2.760e-1362.96Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248G19 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248G19 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406000 ID=DR406000; Name=DR406000; organism=Citrus sinensis; type=EST; length=387bp
GGGACAGTACGGGATTCCTTATAGAAGCAATCCTCAGGGAGCACGTCCCA
NNNGNNNCAGGCGATACTCTTGCATTGGCGTGTGGGCCTCCTCCGATGAT
TCAATTTGCCGTGCAGCCGAATTTGGAGAAAATGAACTACGATACCAAGG
ATTCGTTGCTGGTGTTTTAAATTAAACGCTGGGGGCAAGCACAGACGACG
ATACCAGCCGAGGTTGTACATATTTAAACGTCGAAGTTTTCAGCAGCAGT
TAAGTACTGCGTCACTCTATAGAGTCTATAAATAAATTCTCCCCGATCAA
TAACAAAAAAAAAAAAAATAAAAAATTAAAAATAAAAAAAAAAAAAAAAA
AAAAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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