DR405999

Overview
NameDR405999
Unique NameDR405999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405999 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15
Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = 2
Query:  248 SLSSRFPRETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 547
            S +  + R+  A+  T  D KE P A+ F VD+ GL   D+++Q+ED+RVL ++ +R  E  + +  + R+ER  GKF+R+F LP+N  +D+V A   DG
Sbjct:   40 SATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDG 139          
BLAST of DR405999 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15
Identity = 41/101 (40.59%), Postives = 61/101 (60.40%), Query Frame = 2
Query:  266 PRETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQI-------TADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 547
            P   SA     MDW ETP +HV ++++ GL K+DVK+Q+ED  VL +        A++  ERE K+  WH  ER R +F R   LP   +++Q+RAS+++G
Sbjct:   21 PDWASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKERERE-KDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNG 120          
BLAST of DR405999 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 40/98 (40.82%), Postives = 60/98 (61.22%), Query Frame = 2
Query:  254 SSRFPRETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 547
            S  + R+  A+  T  D KE P ++VF VD+ GL   D+K+Q+E D VL I+  RN E E +   + R+ER  GKF+++F LPE+   D++ A  +DG
Sbjct:   38 SRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDG 135          
BLAST of DR405999 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 38/88 (43.18%), Postives = 56/88 (63.64%), Query Frame = 2
Query:  299 MDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSR-----GKFLRRFRLPENGKIDQVRASIEDG 547
            +DW E+  +H+FK+++ G  KED+K+QIE+  VL I  +   E + +N  WH  ER        +FLRR  LPEN K+DQV+A +E+G
Sbjct:   24 IDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENG 111          
BLAST of DR405999 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14
Identity = 37/95 (38.95%), Postives = 58/95 (61.05%), Query Frame = 2
Query:  263 FPRETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 547
            + R+  A+  T  D KE P ++VF++D+ GL   D+K+Q+EDD +L I  +R  + E +   + R+ER  GK +R+F LPEN   D + A  +DG
Sbjct:   40 YVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDG 134          
BLAST of DR405999 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 37/95 (38.95%), Postives = 59/95 (62.11%), Query Frame = 2
Query:  263 FPRETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 547
            + R+  A+  T  D KE P ++VF VD+ G+   D+K+Q+ED+ VL I+ +R  E E +   + ++ER  GK +R+F LPEN  I+ + A  +DG
Sbjct:   33 YVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDG 127          
BLAST of DR405999 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 2
Query:  224 PFKDFAFPSLSSRFPRETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 547
            P  D A    +  + R+  A+  T  D KE   A+ F VD+ GL+  D+++Q+ED+RVL I+ +R  E E ++  + R+ER  GKF+R+F LP+N  +D+V A   DG
Sbjct:   23 PDGDKAGGGATRTYVRDARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRRE-EREDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDG 129          
BLAST of DR405999 vs. ExPASy Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.743e-13
Identity = 36/96 (37.50%), Postives = 62/96 (64.58%), Query Frame = 2
Query:  263 FPRETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVE-REDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 547
            + R+  A+  T  D  E P A+ F VD+ G+  +++K+Q+E+D VL ++ +R  E +E++   + R+ER  GKF+R+F+LPEN  +D++ A   DG
Sbjct:   35 YMRDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDG 130          
BLAST of DR405999 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 35/97 (36.08%), Postives = 60/97 (61.86%), Query Frame = 2
Query:  263 FPRETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNE--TWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 547
            + R+  A+  T  D KE P ++VF  D+ G+   ++K+Q+EDD VL ++ +R    +D+ +   + R+ER  GKF+R+F LPEN  ++ + A  +DG
Sbjct:   46 YVRDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDG 142          
BLAST of DR405999 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 39/92 (42.39%), Postives = 59/92 (64.13%), Query Frame = 2
Query:  272 ETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 547
            +  A+  T  D KE P A+ F VD+ GL   D+K+Q+ED+RVL I+ +R  E E ++  + R+ER  GKF+R+F LP+N  +D++ A   DG
Sbjct:   46 DARAMAVTPADVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERRRE-EREDAKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDG 136          
The following BLAST results are available for this feature:
BLAST of DR405999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HSP22_MAIZE4.148e-1539.0017.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP16_ORYSJ4.148e-1540.5916.0 kDa heat shock protein, peroxisomal OS=Oryza ... [more]
HSP21_HELAN5.417e-1540.8217.9 kDa class II heat shock protein OS=Helianthus... [more]
HS157_ARATH5.417e-1543.1815.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP21_SOYBN2.058e-1438.9517.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP21_PEA5.989e-1438.9517.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP23_MAIZE1.334e-1338.8917.0 kDa class II heat shock protein OS=Zea mays G... [more]
HS176_ARATH1.743e-1337.5017.6 kDa class II heat shock protein OS=Arabidopsi... [more]
HSP22_IPONI3.882e-1336.0818.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_MAIZE3.882e-1342.3917.5 kDa class II heat shock protein OS=Zea mays P... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248G18 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248G18 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405999 ID=DR405999; Name=DR405999; organism=Citrus sinensis; type=EST; length=685bp
GGGGGGCGCTAAAGTACCAGAGAACCTCCAATGCTTATTATAAATACCCG
GCACTTGCATAGCAATCAATAACAAGCAGCAATACACAATACACAGCAAC
CAATCTAGTATCAAAACCTCACATTCTGTAAGCATTTATCAAGAAGAAAT
GGCGATGATTCCAAGCTTCTTCGGTAGCCAGCATGACAGCATTTTGGATC
CCTTCTCTTTCGATGTTTGGAACCCGTTCAAGGACTTTGCTTTCCCCTCA
CTTTCCTCTCGATTCCCTCGAGAAACCTCCGCTATTGTTAACACTCGCAT
GGACTGGAAGGAAACCCCAGAAGCTCACGTATTCAAGGTGGATCTTGCAG
GTCTTACGAAAGAGGACGTGAAGCTCCAGATTGAAGACGACAGGGTGCTT
CAGATAACAGCAGACAGGAATGTTGAGAGGGAAGACAAGAATGAGACATG
GCATCGTGTAGAGCGCAGCAGAGGCAAGTTCTTGAGGAGGTTCAGGTTGC
CGGAGAATGGGAAGATTGATCAGGTTAGGGCTTCTATTGAGGACGGAGTT
CTTACTGTTACAGTTCCTAAGGAAGAAGTGAAAAAACCTGAACTCAAGGC
CATTGAAATCTCTGGTTGAAGCAGTATATGTTTATGTACTAAGCATCGTG
TTCTATATGTAATACGTGAAAAGACAATATAGATA
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