DR405938

Overview
NameDR405938
Unique NameDR405938
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405938 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.943e-15
Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 2
Query:  104 GERLTKSPPIKMPTLSKLYTMQEAAHHNTKDDCWIVVHNKVYDVTSYLDDHPGGDDVVLAATAKDATDEFEDAGHSKDARELLESFCIGELDTS 385
            G + + S P       K +TM E   H +K+  WIVVH  VYD T++L DHPGG D +L     D T+EF DA HS  A+ LL+++ IGEL T+
Sbjct:  523 GLKRSTSTPFMNTAGDKQFTMSEVRKHGSKESAWIVVHGHVYDCTAFLKDHPGGADSILINAGSDCTEEF-DAIHSDKAKALLDTYRIGELITT 615          
BLAST of DR405938 vs. ExPASy Swiss-Prot
Match: NIA1_MAIZE (Nitrate reductase [NADH] (Fragment) OS=Zea mays PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 2
Query:  107 ERLTKSPPIKMPTLSKLYTMQEAAHHNTKDDCWIVVHNKVYDVTSYLDDHPGGDDVVLAATAKDATDEFEDAGHSKDARELLESFCIGELDTS 385
            +R T +P +    + K +TM E   H +++  WIVVH  VYD T +L DHPGG D +L     D T+EF DA HS  A+ LL+++ IGEL T+
Sbjct:  235 KRSTSTPFMNTTDVGKEFTMSEVRKHASQESAWIVVHGHVYDCTKFLKDHPGGADSILINAGTDCTEEF-DAIHSDKAKALLDTYRIGELITT 326          
BLAST of DR405938 vs. ExPASy Swiss-Prot
Match: NIA3_MAIZE (Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = 2
Query:  143 TLSKLYTMQEAAHHNTKDDCWIVVHNKVYDVTSYLDDHPGGDDVVLAATAKDATDEFEDAGHSKDARELLESFCIGELDTS 385
            T ++ +TM E   H ++D  WIVVH  VYD T++L DHPGG D +L     D T+EF DA HS  A+ELL+++ IG+L T+
Sbjct:  518 TTNQQFTMSEVRKHASQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEF-DAIHSDKAKELLDTYRIGDLVTT 597          
BLAST of DR405938 vs. ExPASy Swiss-Prot
Match: NIA_PHYIN (Nitrate reductase [NADPH] OS=Phytophthora infestans GN=NIAA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.805e-14
Identity = 42/113 (37.17%), Postives = 60/113 (53.10%), Query Frame = 2
Query:  116 TKSPPIKMPTLSKLYTM--QEAAHHNTKDDCWIVVHNKVYDVTSYLDDHPGGDDVVLAATAKDATDEFEDAGHSKDARELLESFCIGELDTSSPLIPELEISSKRQPSDFALK 448
            T  P +    LS+L  +   E A HN+K  CW +  + VYD T +LD+HPGG   +L     D TDEFE   HS  A ++L+ +CIG   ++       + SS  + +D ALK
Sbjct:  524 TPKPGLTADELSELPLIFADEVAKHNSKKSCWFICRDLVYDATPFLDEHPGGATSILLCGGTDCTDEFESI-HSTKAWQMLKKYCIGRCSSTEDDTGTSDTSSDHEETDVALK 635          
BLAST of DR405938 vs. ExPASy Swiss-Prot
Match: CYB51_SCHPO (Probable cytochrome b5 1 OS=Schizosaccharomyces pombe GN=SPBC29A10.16c PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 2
Query:  152 KLYTMQEAAHHNTKDDCWIVVHNKVYDVTSYLDDHPGGDDVVLAATAKDATDEFEDAGHSKDARELLESFCIGELDTSSPLIPELEISSKRQPSDF 439
            K +  +E   HN   D ++V++ KVYDV+++ DDHPGG D++L    +DAT  ++D GHS  A ELLE   IG+L   +    E  +   ++P  F
Sbjct:    4 KYFEPEEIVEHNNSKDMYMVINGKVYDVSNFADDHPGGLDIMLDYAGQDATKAYQDIGHSIAADELLEEMYIGDLKPGT----EERLKELKKPRSF 95          
BLAST of DR405938 vs. ExPASy Swiss-Prot
Match: NIA_CHLVU (Nitrate reductase [NADH] (Fragment) OS=Chlorella vulgaris PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 41/88 (46.59%), Postives = 52/88 (59.09%), Query Frame = 2
Query:  113 LTKSPPIKMPTLSKLYTMQEAAHHNTKDDCWIVVHNKVYDVTSYLDDHPGGDDVVLAATAKDATDEFEDAGHSKDARELLESFCIGEL 376
            +T +PP   P  +K +TM E   H T +  W VV  KVYD T +L DHPGG D +L     DATDEF +A HS  A++ L  + IGEL
Sbjct:  205 VTVAPP-PAPAGAKSFTMAEVETHTTMESAWFVVDGKVYDATPFLKDHPGGADSILLVAGIDATDEF-NAIHSLKAKKQLLEYYIGEL 290          
BLAST of DR405938 vs. ExPASy Swiss-Prot
Match: FAD5A_DICDI (Delta(5) fatty acid desaturase A OS=Dictyostelium discoideum GN=fadA PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11
Identity = 40/111 (36.04%), Postives = 59/111 (53.15%), Query Frame = 2
Query:  152 KLYTMQEAAHHNTKDDCWIVVHNKVYDVTSYLDDHPGGDDVVLAATAKDATDEFEDAGHSKD-ARELLESFCIGELDTSSPLIPELEISSKRQPSDFALKLKNLTKQYWAA 481
            K Y+  E A HNT++DCW+ V  KVYD+T ++  HPGG +V+L A  +D T+ FE      D    +L+++ IG        I   E     Q SDF   LK   ++++ A
Sbjct:   14 KQYSWSELAKHNTENDCWVAVDGKVYDITRWVPLHPGGKEVLLLAAGRDVTNLFESYHPMSDKPTSILKNYEIG-------YISSYEHPKFVQKSDFYKTLKERVRKHFKA 117          
BLAST of DR405938 vs. ExPASy Swiss-Prot
Match: NIA_BEABA (Nitrate reductase [NADPH] OS=Beauveria bassiana GN=NIA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 36/116 (31.03%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  140 PTLSKLYTMQEAAHHNTKDDCWIVVHNKVYDVTSYLDDHPGGDDVVLAATAKDATDEFEDAGHSKDARELLESFCIGELDTSSPLIPELEISSKRQPSDFALKLKNLTKQYWAAPV 487
            P + ++ +++E   H  + + W VV+  VY+ T YLD+HPGG   ++ A A+DAT+EF    HS++A+ ++  + IG L+ ++     LE S++  P+    +   L  +YW+  +
Sbjct:  532 PKVVRIISLEELKAHEGEMEPWFVVNGHVYNGTPYLDNHPGGATSIINAAAQDATEEFMTI-HSENAKAMMPQYHIGTLNDAAR--KALEGSAEESPASDPTRAVFLQPKYWSKAI 644          
BLAST of DR405938 vs. ExPASy Swiss-Prot
Match: NIA_NEUCR (Nitrate reductase [NADPH] OS=Neurospora crassa GN=nit-3 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 38/114 (33.33%), Postives = 67/114 (58.77%), Query Frame = 2
Query:  107 ERLTKSPPIKMPTL-----SKLYTMQEAAHHNTKDDCWIVVHNKVYDVTSYLDDHPGGDDVVLAATAKDATDEFEDAGHSKDARELLESFCIGELDTSSPLIPELEISSKRQPS 433
            E + K  P+K  ++     ++L T++E   H+ +++ W VV+ +VY+ T +L+ HPGG   +  A  +D TDEF  A HS++A+ ++ ++ IG L  S+P    L+ SS   P+
Sbjct:  598 ENVVKEEPVKEISMVDEKVTRLITLEELRQHDGEEEPWFVVNGQVYNGTPFLEGHPGGAASITGAAGQDVTDEFL-AIHSENAKAMMPTYHIGTLTPSAP--AALKSSSTSDPA 708          
BLAST of DR405938 vs. ExPASy Swiss-Prot
Match: NIA_LEPMC (Nitrate reductase [NADPH] OS=Leptosphaeria maculans GN=NIAD PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 40/130 (30.77%), Postives = 72/130 (55.38%), Query Frame = 2
Query:   95 EREGERLTKSPPIKMPT--LSKLYTMQEAAHHNTKDDCWIVVHNKVYDVTSYLDDHPGGDDVVLAATAKDATDEFEDAGHSKDARELLESFCIGELDTSSPLIPELEISSKRQPSDFALKLKNLTKQYWA 478
            E E   + +   IKM    ++++  + E   H + +  W VV+++VYD TS+L+ HPGG   +++A   DA+DEF  A HS+ A+ ++ ++ IG L  ++     LE  + +Q S  +L+   L  + W+
Sbjct:  516 ELENTAVEEVKEIKMTKDGVNRIVELDELKWHESAEYPWFVVNDEVYDGTSFLEGHPGGAQSIISAAGLDASDEFM-AIHSETAKAMMPAYHIGTLSPTASKQLSLEEPTSKQASSSSLRPTFLDSRTWS 644          
The following BLAST results are available for this feature:
BLAST of DR405938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
NIA1_HORVU1.943e-1544.68Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]
NIA1_MAIZE3.314e-1544.09Nitrate reductase [NADH] (Fragment) OS=Zea mays PE... [more]
NIA3_MAIZE5.652e-1548.15Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1[more]
NIA_PHYIN2.805e-1437.17Nitrate reductase [NADPH] OS=Phytophthora infestan... [more]
CYB51_SCHPO1.818e-1338.54Probable cytochrome b5 1 OS=Schizosaccharomyces po... [more]
NIA_CHLVU3.102e-1346.59Nitrate reductase [NADH] (Fragment) OS=Chlorella v... [more]
FAD5A_DICDI1.303e-1136.04Delta(5) fatty acid desaturase A OS=Dictyostelium ... [more]
NIA_BEABA3.791e-1131.03Nitrate reductase [NADPH] OS=Beauveria bassiana GN... [more]
NIA_NEUCR4.952e-1133.33Nitrate reductase [NADPH] OS=Neurospora crassa GN=... [more]
NIA_LEPMC4.952e-1130.77Nitrate reductase [NADPH] OS=Leptosphaeria maculan... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248D21 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248D21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405938 ID=DR405938; Name=DR405938; organism=Citrus sinensis; type=EST; length=701bp
GGGGTTTAACCCGAGAGACAGAAAACGGGCCTGAGATGCCAAATCCCAAT
TCTCGAGCACAGGGTTGAAGGTGAGGATCTCAGAAAATCTTGTTGAGAGA
GAGGGAGAGCGGCTGACCAAAAGCCCACCAATAAAGATGCCGACTCTCTC
AAAGCTCTACACGATGCAAGAAGCTGCTCACCACAACACCAAAGACGATT
GCTGGATTGTCGTTCATAACAAGGTGTATGATGTCACTTCATATTTGGAC
GATCATCCTGGTGGAGATGATGTAGTTCTTGCTGCAACGGCAAAAGATGC
AACAGACGAATTTGAAGATGCTGGGCATAGCAAAGATGCAAGGGAACTCC
TGGAGAGCTTTTGTATCGGTGAACTTGACACTTCATCTCCATTGATCCCA
GAACTTGAGATTTCGTCTAAAAGGCAACCGTCAGATTTTGCACTAAAGCT
CAAGAACTTGACAAAGCAATACTGGGCTGCTCCTGTTGCTGTTGTTGGCA
TCTCCGTGATGGTTGGCTTCTTGTGCTTGCGCAAGAAGTGAACCAACGCA
TCTCCATTAAACTGTCTAGTATGCTTGCATGAAATTTTGGAATTGCAAAA
GCAGGCTATAATTTATAGAAAAACGGTGACGCACAATAATTTCTCTTTTC
TATTTTTATTTTTTTAAGAGTTCTACATAAAAAAAAAAAAAAAAAAAAAA
A
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