DR405880

Overview
NameDR405880
Unique NameDR405880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.633e-37
Identity = 88/209 (42.11%), Postives = 123/209 (58.85%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT----SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL--CAAVQQPISVGM-VGSASDFQLYTSGIYNG-DCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            VK QGSCGSCW FS  GA+EG   L TG L+SLS Q LVDC T     + GC GG+M  AF+++I+   ID+E+ YPY  +D  C +   + +  +   Y ++   D   L    A + P+SVG+   S S F LY SG+Y+   C+ +   ++H VL+VGYG+ +G+DYW+VKNSWG  +G  GY  + R+       C I +  SYP
Sbjct:  128 VKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQYIIDT-SIDSEASYPYKAMDEKC-LYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTEN---MNHGVLVVGYGTLDGKDYWLVKNSWGLHFGDQGYIRMARNNK---NHCGIASYCSYP 328          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.661e-36
Identity = 80/204 (39.22%), Postives = 104/204 (50.98%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINN--GGIDTESDYPYTGVDG---TCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMAS 661
            VK QG CGSCW FST G IEG   +    L+SLSEQ LV CDT   GC+GG MD AF W++N+  G + TE+ YPY   +G    C +   E      D     +  D+     A   P+++ +   A  F  Y  GI     S     +DH VL+VGY   +   YWI+KNSW   WG DGY  I + T+    +C +N   S
Sbjct:  141 VKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAV--DAESFMDYNGGILTSCTSKQ---LDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTN----QCLMNQAVS 335          

HSP 2 Score: 28.1054 bits (61), Expect = 2.661e-36
Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 1
Query:    4 VQSCEAPSSLDWRKRGIVTP 63
            V +  AP+++DWR++G VTP
Sbjct:  121 VTTGRAPAAVDWREKGAVTP 140          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.299e-36
Identity = 79/195 (40.51%), Postives = 112/195 (57.44%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAIN 649
            VKDQG+CGSCW  +  G +E + A+    LI+LSEQ+L+DCD+ +  CDGG M  AFE ++N GG+  E DYPY G  G C I  ++   +S+   K     +   L   +     + M   A+    Y+ GI +  C N    ++HAVL+VGYG+E G  YW +KNSWG+ WG DGYF + R+ +     C +N
Sbjct:  141 VKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDSANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTKGVCKIDNKKF-ALSVSSCKRYIFQNEENLKKELITMGPIAMAIDAASISTYSKGIIH-FCEN--LGLNHAVLLVGYGTEGGVSYWTLKNSWGSDWGEDGYFRVKRNIN----ACGLN 327          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.878e-36
Identity = 85/206 (41.26%), Postives = 111/206 (53.88%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVI--NNGGIDTESDYPYT---GVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA--AVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMAS 661
            VKDQG CGSCW FS  G +E    L    L +LSEQ LV CD T  GC GG M+ AFEW++  NNG + TE  YPY    G+   C  T   T   +I G+ ++ P D A + A  AV  P++V +   AS +  YT G+     S     +DH VL+VGY       YWI+KNSW T WG +GY  I + ++    +C +   AS
Sbjct:  138 VKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCT-TSGHTVGATITGHVEL-PQDEAQIAAWLAVNGPVAVAV--DASSWMTYTGGVMTSCVSEQ---LDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSN----QCLVKEEAS 332          

HSP 2 Score: 25.7942 bits (55), Expect = 5.878e-36
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1
Query:    4 VQSCEAPSSLDWRKRGIVT 60
            V+   AP+++DWR RG VT
Sbjct:  118 VEVVGAPAAVDWRARGAVT 136          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.334e-36
Identity = 80/190 (42.11%), Postives = 105/190 (55.26%), Query Frame = 2
Query:   53 SLLLVKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTS 622
            S+  VK Q  CGSCW FS    IE +  +     + LSEQ+LVDCD  + GC+GG M +AFE +I  GGI  E+ YPYTGVDG C   K  T+ V + G    +      L   + +   V +     D   Y SG+    CS D + ++H VL+VGYG EN   YW +KNSWG+ WG  G+F I RD +
Sbjct:  144 SVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCDKVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVC---KNTTRYVQLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVDLTNYKSGVAK-HCSVD-HGLNHGVLLVGYGQENDVKYWTLKNSWGSDWGEQGFFRIKRDVN 328          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.634e-35
Identity = 82/215 (38.14%), Postives = 123/215 (57.21%), Query Frame = 2
Query:   50 ESLLLVKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL--CAAVQQPISVGMVGSASDFQLYTSGI---YNGDCSNDPYYIDHAVLIVGYGSENGED------YWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMAS 661
            +++  VK+QGSCGSCW FS TG IEG+ A+ TG+L   SEQEL+DCDTT   C+GG MD A++ + + GG++ E++YPY      C+  +  +  V + G+ D+   +   +        PIS+G+  +A+  Q Y  G+   +   CS     +DH VL+VGYG  +  +      YWIVKNSWG  WG  GY+ + R  +     C ++ MA+
Sbjct:  404 DAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFNRTLSH-VQVAGFVDLPKGNETAMQEWLLANGPISIGI--NANAMQFYRGGVSHPWKALCSKK--NLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDN----TCGVSEMAT 609          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.787e-35
Identity = 90/204 (44.12%), Postives = 117/204 (57.35%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNG---DCSNDPYYIDHAVLIVGYG-SENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMAS 661
            VK+QG CGSCW FSTTG +E      TG L+SLSEQ+LVDCD    GC+GG    A+E +I  GG+  E +YPY   +  C++ K +   V I+   ++   ++ L         ISVGM  +A   Q Y  GI +     CS   Y +DHAVL+VGYG SE  E +WIVKNSWG  WG +GYF + R      G C IN +A+
Sbjct:  120 VKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNEKCHL-KTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGM--NALLLQFYQHGISHPWWIFCSK--YLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRMYRGD----GSCGINTVAT 314          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.885e-35
Identity = 86/209 (41.15%), Postives = 115/209 (55.02%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYG----SENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            V+ QG C SCW FS TGAIEG     TG LI LS Q LVDC     ++GC  G    A  +V+ NGG+++E+ YPY   DG+C  + E +   +I G++ V  ++ AL+ A     PISV +    + F  Y  GI Y  +CS+    + H++L+VGYG      +G  YW+VKNS GT WG  GY  I+RD       C I   A YP
Sbjct:  129 VQTQGRCNSCWAFSVTGAIEGQMFRKTGQLIPLSVQNLVDCSRPQGNWGCYLGNTYLALHYVMENGGLESEATYPYEEKDGSCRYSPENS-TANITGFEFVPKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSS--CVVTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDKG---NHCGIATYALYP 331          

HSP 2 Score: 25.409 bits (54), Expect = 2.885e-35
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 1
Query:   10 SCEAPSSLDWRKRGIVTP 63
            S   P  ++W+KRG VTP
Sbjct:  111 SVNLPKFINWKKRGYVTP 128          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.640e-35
Identity = 76/189 (40.21%), Postives = 115/189 (60.85%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDG-YKDVEPSDSAL--LCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTS 622
            +K+QG+CG+CW F+T  ++E   A+    LI LSEQ+L+DCD+   GC+GG +  AFE ++  GG+ TE DYP+ G +  C + +    VVS+ G Y+ V  ++  L  L  AV     + M   A+D   Y  G+ +  C N+   ++HAVL+VGYG ENG  YW+ KN+WG  WG +GYF + ++ +
Sbjct:  159 IKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCDSVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVG---PIPMAIDAADIVNYYRGVIS-SCENNG--LNHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQNVN 341          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.753e-35
Identity = 78/187 (41.71%), Postives = 111/187 (59.36%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV---EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD 616
            VK+QG+CG+CW F+T G++E   A+    LI+LSEQ+L+DCD    GCDGG +  A+E V+N GGI  E+DYPY   +G C +   +  V     Y+ V   E     LL      P+++     ASD   Y  G+    C+N  + ++HAVL+VGY  ENG  +WI+KN+WGT WG  GYF + ++
Sbjct:  128 VKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGDCRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAI----DASDIVNYKRGVIR-YCAN--HGLNHAVLLVGYAVENGVPFWILKNTWGTDWGEQGYFRVQQN 307          
The following BLAST results are available for this feature:
BLAST of DR405880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
CATS_RAT6.633e-3742.11Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CYSP_TRYBB2.661e-3639.22Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATV_NPVAH4.299e-3640.51Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CYSP_TRYCR5.878e-3641.26Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATV_GVXN7.334e-3642.11Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CPR1_DROME1.634e-3538.14Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATL_SCHMA2.787e-3544.12Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATM_MOUSE2.885e-3541.15Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATV_NPVLD3.640e-3540.21Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATV_NPVCD4.753e-3541.71Viral cathepsin OS=Choristoneura fumiferana defect... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248B01 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405880 ID=DR405880; Name=DR405880; organism=Citrus sinensis; type=EST; length=688bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTAGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGNNG
TTCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGA
CCTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCT
ATGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAAC
AACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGG
TACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTT
ATAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAA
CAACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATA
TACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTG
ATCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTAT
TGGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTT
TTACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATG
CTATGGCTTCTTATCCAATCGAAGAATCCTATGCACCA
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