DR405880

Overview
NameDR405880
Unique NameDR405880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATC_RAT (Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Ctsc PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25
Identity = 79/217 (36.41%), Postives = 114/217 (52.53%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLIS--LSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKD---VEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPY----YIDHAVLIVGYGSE--NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAIN--AMASYPI 670
            V++Q SCGSC+ F++ G +E    ++T +  +  LS QE+V C   + GCDGG+          + G+  E+ +PYT  D  C   +   +  S + Y         + AL+   + +  P++V       DF  Y SGIY+    +DP+      +HAVL+VGYG +   G DYWIVKNSWG+ WG  GYF I R T     +CAI   AMA+ PI
Sbjct:  248 VRNQESCGSCYSFASLGMLEARIRILTNNSQTPILSPQEVVSCSPYAQGCDGGFPYLIAGKYAQDFGVVEENCFPYTATDAPCKPKENCLRYYSSEYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVH-DDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIVKNSWGSQWGESGYFRIRRGTD----ECAIESIAMAAIPI 459          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25
Identity = 70/192 (36.46%), Postives = 95/192 (49.48%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQP-ISVGMVGSASD---FQLYTSG-IYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSL 625
            ++ QG CGSCW FS   A E          + LSEQELVDC  + +GC G  +    E++  NG ++ E  YPY   +  C   +  ++   I  Y  + P D   +  A+ Q   ++ ++    D   FQ Y    I   D    P Y  HAV IVGYGS  G+DYWIV+NSW T+WG  GY Y     +L
Sbjct:  124 IRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDC-ASQHGCHGDTIPRGIEYIQQNGVVE-ERSYPYVAREQRCR--RPNSQHYGISNYCQIYPPDVKQIREALTQTHTAIAVIIGIKDLRAFQHYDGRTIIQHDNGYQPNY--HAVNIVGYGSTQGDDYWIVRNSWDTTWGDSGYGYFQAGNNL 309          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25
Identity = 69/209 (33.01%), Postives = 104/209 (49.76%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTG-VDGTCNITKEETKVVSIDGYKDVEPSDSALL-CAAVQQPISVGMVGSASDFQLYTSGIYNGDCSN-DPYYIDHAVLIVGYGSENGED--------------------YWIVKNSWGTSWGIDGYFYITRDTS 622
            +KDQ +C  CW  +  G IE +  +   D + +S QEL+DC     GC GG++  AF  V+NN G+ +E DYP+ G V       K+  KV  I  +  ++ ++  +    A   PI+V +  +    QLY  G+     +  DP  +DH+VL+VG+GS   E+                    YWI+KNSWG  WG  GYF + R ++
Sbjct:  144 IKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTI--NMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSN 350          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.298e-24
Identity = 78/217 (35.94%), Postives = 115/217 (53.00%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLIS--LSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKD---VEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPY----YIDHAVLIVGYGSE--NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAIN--AMASYPI 670
            V++Q SCGSC+ F++ G +E    ++T +  +  LS QE+V C   + GCDGG+          + G+  ES +PYT  D  C   +   +  S D Y         + AL+   + +  P++V       DF  Y SGIY+    +DP+      +HAVL+VGYG +   G +YWI+KNSWG++WG  GYF I R T     +CAI   A+A+ PI
Sbjct:  248 VRNQESCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSPYAQGCDGGFPYLIAGKYAQDFGVVEESCFPYTAKDSPCKPRENCLRYYSSDYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVH-DDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGRDPVTGIEYWIIKNSWGSNWGESGYFRIRRGTD----ECAIESIAVAAIPI 459          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24
Identity = 70/227 (30.84%), Postives = 113/227 (49.78%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTG--VDGTCNITKEETKVVSIDGYKDVEPSDSALL-CAAVQQPISVGMVGSASDFQLYTSGIYNGDCSN-DPYYIDHAVLIVGYGSE-----------------NGEDYWIVKNSWGTSWGIDGYFYITR-DTSLEYGKCAINAMASYPIEES 679
            VK+QGSC  CW  +    I+ +  +     + +S QEL+DC+    GC+GG++  A+  V+NN G+ +E DYP+ G      C + K+  KV  I  +  +  ++ A+    AV  PI+V +  +    Q Y  G+     S+ DP  +DH+VL+VG+G +                 +   YWI+KNSWG  WG  GYF + R + +    K    A    P++++
Sbjct:  142 VKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCERCGNGCNGGFVWDAYLTVLNNSGLASEKDYPFQGDRKPHRC-LAKKYKKVAWIQDFTMLSNNEQAIAHYLAVHGPITVTI--NMKLLQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQTGTVLSHSRKRRHSSPYWILKNSWGAHWGEKGYFRLYRGNNTCGVTKYPFTAQVDSPVKKA 365          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24
Identity = 72/210 (34.29%), Postives = 106/210 (50.48%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLIS--LSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCN----ITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPY----YIDHAVLIVGYGSEN--GEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 658
            V++Q SCGSC+ F++T  +E    ++T +  +  LS QE+V C   + GC+GG+          + G+  E+ +PY G D  C          ++   + G+          L      P++V       DF  Y  GIY      DP+      +HAVL+VGYG+++  G DYWIVKNSWG+ WG DGYF I R T     +CAI ++A
Sbjct:  222 VRNQASCGSCYAFASTAMLEARIRILTNNTQTPILSPQEIVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYAGSDSPCKPNDCFRYYSSEYYYVGGFYGACNEALMKLELVRHGPMAVAFE-VYDDFFHYQKGIYYHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGSRWGEDGYFRIRRGTD----ECAIESIA 426          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23
Identity = 56/141 (39.72%), Postives = 83/141 (58.87%), Query Frame = 2
Query:  212 GGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENGE----DYWIVKNSWGTSWGIDGYFYITRD 616
            GG +D AF++V +NGG+D+E  YPY     +C   + E  V ++  Y D+   ++ L+   A   PIS  +  S   F+ Y  GI Y+  CS++   +DH VL+VGYG++  E     YWI+KNSWGT WG+DGY  + +D
Sbjct:    1 GGLIDDAFQYVKDNGGLDSEESYPYHAQGDSCKY-RPENSVANVTDYWDIPSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSED--VDHGVLVVGYGADGTETENKKYWIIKNSWGTDWGMDGYIKMAKD 138          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 66/194 (34.02%), Postives = 97/194 (50.00%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQP-ISVGMVGSASDFQLYTSGIYNG------DCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSL 625
            ++ QG CGSCW FS   + E          + L+EQELVDC + + GC G  +    E++  NG +  E  YPY   + +C+  +   +   +  Y  + P DS  +  A+ Q   +V ++    D   +    Y+G      D    P Y  HAV IVGYG+  G DYWIV+NSW T+WG +GY Y   + +L
Sbjct:  124 IRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDCASQN-GCHGDTIPRGIEYIQQNGVVQ-EHYYPYVAREQSCH--RPNAQRYGLKNYCQISPPDSNKIRQALTQTHTAVAVIIGIKDLNAFRH--YDGRTIMQHDNGYQPNY--HAVNIVGYGNTQGVDYWIVRNSWDTTWGDNGYGYFAANINL 309          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 73/214 (34.11%), Postives = 101/214 (47.20%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTG--DLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCNITKEETKVVSID-----GYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYY-------IDHAVLIVGYGSE--NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAM 655
            +++QG CGSC+   +  A+E    LV+   +   LS Q +VDC   S GC+GG+          + G+  +   PYTG D G C ++K  T+  + D     GY          L      P  VG      DFQ Y  GIY+       +Y        +HAVL+VGYG +  +GE YW VKNSWG  WG  GYF I R T     +C + ++
Sbjct:  238 IRNQGICGSCYASPSAAALEARIRLVSNFSEQPILSPQTVVDCSPYSEGCNGGFPFLIAGKYGEDFGLPQKIVIPYTGEDTGKCTVSKNCTRYYTTDYSYIGGYYGATNEKLMQLELISNGPFPVGFE-VYEDFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVDKLSGEPYWKVKNSWGVEWGEQGYFRILRGTD----ECGVESL 446          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 73/204 (35.78%), Postives = 96/204 (47.06%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGD--LISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPY----TGVDGTCNITKEETKVVSIDG------YKDVEPSDSALLCAAVQQPISVG-----MVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSEN-GEDYWIVKNSWGTSWGIDGYFYITRDTS 622
            V DQG CGSCW FS+  ++         D   +  S Q +V CD     CDGG++   + ++   G   T+   PY    TG  GTC      TK    DG      YK  +  D  L   A+ + ++ G          SDF  Y SG+Y            HAV +VGYG+++ G DYWI+KNSWG  WG DGYF I R T+
Sbjct:   91 VVDQGGCGSCWAFSSVASVGDRRCFAGLDKKAVKYSPQYVVSCDRGDMACDGGWLPSVWRFLTKTG-TTTDECVPYQSGSTGARGTC-----PTKCA--DGSDLPHLYKATKAVDYGLDAPAIMKALATGGPLQTAFTVYSDFMYYESGVYQHTYGRVEG--GHAVDMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRIIRMTN 284          
The following BLAST results are available for this feature:
BLAST of DR405880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
CATC_RAT4.459e-2536.41Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Cts... [more]
PEPT1_DERFA5.824e-2536.46Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]
CATW_HUMAN7.607e-2533.01Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
CATC_MOUSE1.298e-2435.94Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
CATW_MOUSE3.775e-2430.84Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATC_CANFA3.775e-2434.29Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
CATL1_FELCA1.098e-2339.72Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE... [more]
PEPT1_EURMA5.451e-2334.02Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]
CATC_SCHMA1.586e-2234.11Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]
CATB3_GIALA2.071e-2235.78Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248B01 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405880 ID=DR405880; Name=DR405880; organism=Citrus sinensis; type=EST; length=688bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTAGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGNNG
TTCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGA
CCTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCT
ATGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAAC
AACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGG
TACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTT
ATAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAA
CAACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATA
TACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTG
ATCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTAT
TGGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTT
TTACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATG
CTATGGCTTCTTATCCAATCGAAGAATCCTATGCACCA
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