DR405880

Overview
NameDR405880
Unique NameDR405880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5704 contig Csv1_Contig5704:54..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.203e-40
Identity = 88/208 (42.31%), Postives = 122/208 (58.65%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT----SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL--CAAVQQPISVGMVGSASDFQLYTSGIYNG-DCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            VK QGSCG+CW FS  GA+EG   L TG LISLS Q LVDC       + GC GGYM  AF+++I+NGGI+ ++ YPY   D  C+    + +  +   Y  +   D   L    A + P+SVG+  S S F  Y SG+Y+   C+ +   ++H VL+VGYG+ +G+DYW+VKNSWG ++G  GY  + R+       C I +  SYP
Sbjct:  138 VKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHY-NSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGN---VNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNK---NHCGIASYCSYP 338          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.877e-40
Identity = 91/213 (42.72%), Postives = 121/213 (56.81%), Query Frame = 2
Query:   32 WIGGKGESLLLVKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGI---YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMAS 661
            W   K  ++  VK+QG CGSCW FS TG +EG   L  G L+SLSEQEL+DCD     C GG    A+  + N GG++TE DY Y G   TCN + +  KV   D  +     +      A + PISV +  +A   Q Y  GI   +   CS  P++IDHAVL+VGYG+ +   YW +KNSWG+ WG +GY+Y+ R +    G C +N MAS
Sbjct:  253 WDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAI--NAFGMQFYRHGIAHPFRPLCS--PWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGS----GACGVNTMAS 457          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.877e-40
Identity = 84/202 (41.58%), Postives = 112/202 (55.45%), Query Frame = 2
Query:   68 KDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            KDQG CGSCW F TT  +EG      G L S SEQ+LVDCD +  GC+GG+   + +++  N G+  ESDYPY  V GTC   K+   V ++ G + V       L   + +  P++VGM  S   FQLY  G    D       ++H V  VGYGS +   YWI++NSWGTSWG  GYF + RD++     C I   ++YP
Sbjct:  107 KDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCDASDNGCEGGHPSNSLKFIQENNGLGLESDYPYKAVAGTC---KKVKNVATVTGSRRVTDGSETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMMNHCVTAVGYGSNSNGKYWIIRNSWGTSWGDAGYFLLARDSN---NMCGIGRDSNYP 302          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.316e-40
Identity = 89/208 (42.79%), Postives = 125/208 (60.10%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYN-GDCSNDPYYIDHAVLIVGYGSE-NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPI 670
            V++QG CGSC+ F+T  A+E  +  +TG L+ LS Q +VDC  +  + GC GGYM  AF++  +  GI  ES YPY G +  C   ++   VV+ +G+ +++P D   L  AV +  P+ VG+ GS   F+ Y  G+Y+ G+C       DHAVL VGYG+  +  DYWIVKNSWGT WG DGY Y+ R+       C I + AS+PI
Sbjct:  197 VRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLGNNGCSGGYMPTAFQYA-SRYGIAMESRYPYVGTEQRCR-WQQSIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCGRP----DHAVLAVGYGTHPSYGDYWIVKNSWGTDWGKDGYVYMARNRG---NMCHIASAASFPI 395          

HSP 2 Score: 24.6386 bits (52), Expect = 4.316e-40
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P  +DWR +G VTP
Sbjct:  183 PDQVDWRTKGAVTP 196          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 4.337e-40
Identity = 93/209 (44.50%), Postives = 118/209 (56.46%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCD--TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGED----YWIVKN-SWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            VKDQG CGSCW FS TGA+EG     TG LISL+EQ LVDC     + GC+GG+MD  F +V  NGG+D+E+ YPY G   TC    + +   +  G+ D+   +  L  A A   PISV    S   FQ Y  GIY  +   DP  +DHA+L+VGY  E  +     YW+VKN S G +WG+DGY  + +D       C I   ASYP
Sbjct:   72 VKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEGKVKTCRYNPKYS-AANDTGFVDIPSQEKDLAKAVATVGPISVAAGASHVSFQFYKKGIY-FEPRCDPEGLDHAMLLVGYSYEGADSDNNKYWLVKNSSEGKNWGMDGYIKMAKD---RRNNCGIATAASYP 275          

HSP 2 Score: 27.7202 bits (60), Expect = 4.337e-40
Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTP 63
            E P+S+DWR++G +TP
Sbjct:   56 EIPTSVDWREKGYMTP 71          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.410e-40
Identity = 93/207 (44.93%), Postives = 120/207 (57.97%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL--CAAVQQPISVGMVGSASDFQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPI 670
            VKDQG+CGSCW FSTTG +EG         IS SEQ+LVDC     + GC GG M+ A+++ +   G++TES YPYT V+G C   K+   V  + GY  V       L      ++P +V  V   SDF +Y SGIY    CS  P  ++HAVL VGYG++ G DYWIVKNSWGT WG  GY  + R+       C I ++AS P+
Sbjct:  123 VKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQY-LKQFGLETESSYPYTAVEGQCRYNKQ-LGVAKVTGYYTVHSGSEVELKNLVGARRPAAVA-VDVESDFMMYRSGIYQSQTCS--PLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGYIRMARNRG---NMCGIASLASLPM 321          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.334e-40
Identity = 90/221 (40.72%), Postives = 128/221 (57.92%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCD---------TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ-PISVGMVGSASDFQLYTSGIYNGDCSNDPYY-----IDHAVLIVGYGSE-------NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMAS 661
            VKDQGSCGSCW FSTTGA+EG + L TG L+SLSEQ+LVDCD         +   GC+GG M+ AFE+++ +GG+  E DY YTG DG+C   K +  V S+  +  V   +  +    V+  P++V +  +A+  Q Y SG+      + PY      +DH VL+VG+G           + YWI+KNSWG +WG  GY+ I R  ++    C +++M S
Sbjct:  147 VKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDKSKV-VASVSNFSVVTLDEDQIAANLVKNGPLAVAI--NAAWMQTYMSGV------SCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNV----CGVDSMVS 354          

HSP 2 Score: 25.0238 bits (53), Expect = 7.334e-40
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P   DWR++G VTP
Sbjct:  133 PEDFDWREKGAVTP 146          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.371e-40
Identity = 90/202 (44.55%), Postives = 115/202 (56.93%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGI---YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMAS 661
            VKDQG CGSCW FS TG +EG   L  G L+SLSEQEL+DCD     C GG    A+  + N GG++TE DY Y G   +CN + E+ KV   D  +  +         A + PISV +  +A   Q Y  GI       CS  P+ IDHAVL+VGYG+ +   +W +KNSWGT WG  GY+Y+ R +    G C +N MAS
Sbjct:  286 VKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAI--NAFGMQFYRHGISRPLRPLCS--PWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGS----GACGVNTMAS 479          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 2.756e-39
Identity = 88/210 (41.90%), Postives = 119/210 (56.67%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSE----NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPI 670
            VK+QG C S W FS TG++EG     T  LI LSEQ L+DC     ++GC GG+M YAF++V +NGG+ TE  YPY G    C     E    ++  +  +  S+ AL+ A  +  PISV +  S   FQ Y SGI Y   C     +++HAVL+VGYG E    +G  +W+VKNSWG  WG+ GY  + +D S     C I   ++YPI
Sbjct:  129 VKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRY-HAENSAANVRDFVQIPGSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKR--VHLNHAVLVVGYGFEGEESDGNSFWLVKNSWGEEWGMKGYMKLAKDWS---NHCGIATYSTYPI 332          

HSP 2 Score: 23.483 bits (49), Expect = 2.756e-39
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P  +DWR+ G VTP
Sbjct:  115 PKRVDWRQLGYVTP 128          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 161.77 bits (408), Expect = 3.181e-39
Identity = 86/207 (41.55%), Postives = 123/207 (59.42%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSY---GCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV--QQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            VK QGSCG+CW FS  GA+E    L TG L+SLS Q LVDC T  Y   GC+GG+M  AF+++I+N GID+++ YPY  +D  C     + +  +   Y ++      +L  AV  + P+SVG+      F LY SG+ Y   C+ +   ++H VL+VGYG  NG++YW+VKNSWG ++G +GY  + R+       C I +  SYP
Sbjct:  130 VKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQY-DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQN---VNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYP 329          
The following BLAST results are available for this feature:
BLAST of DR405880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
CATS_MOUSE2.203e-4042.31Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATF_MOUSE2.877e-4042.72Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
ACP1_ENTHI2.877e-4041.58Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CATL_BRUPA4.316e-4042.79Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CATL6_HUMAN4.337e-4044.50Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATLL_FASHE6.410e-4044.93Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CYSP_PEA7.334e-4040.72Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CATF_HUMAN8.371e-4044.55Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
TEST2_RAT2.756e-3941.90Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATS_HUMAN3.181e-3941.55Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248B01 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405880 ID=DR405880; Name=DR405880; organism=Citrus sinensis; type=EST; length=688bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTAGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGNNG
TTCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGA
CCTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCT
ATGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAAC
AACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGG
TACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTT
ATAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAA
CAACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATA
TACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTG
ATCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTAT
TGGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTT
TTACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATG
CTATGGCTTCTTATCCAATCGAAGAATCCTATGCACCA
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