DR405880

Overview
NameDR405880
Unique NameDR405880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 6.096e-39
Identity = 83/209 (39.71%), Postives = 122/209 (58.37%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYN-GDCSNDPYYIDHAVLIVGYGSE----NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            V++QG CGSCW F+  GAIEG     TG+L  LS Q L+DC  +  + GC  G    AF +V+ N G++ E+ YPY G DG C    E     +I G+ ++ P++  L  A     P+S  +  S   F+ Y+ G+Y+  +CS+  Y ++HAVL+VGYG E    +G +YW++KNSWG  WGI+G+  I +D +     C I + AS+P
Sbjct:  129 VRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKDGPCRYHSENAS-ANITGFVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSS--YVVNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEWGINGFMKIAKDRN---NHCGIASQASFP 331          

HSP 2 Score: 24.6386 bits (52), Expect = 6.096e-39
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P+  DWRK G VTP
Sbjct:  115 PNFKDWRKEGYVTP 128          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 1.754e-38
Identity = 86/221 (38.91%), Postives = 130/221 (58.82%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCD---------TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ-PISVGMVGSASDFQLYTSGIYNGDCSNDPYY----IDHAVLIVGYGSE-------NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMAS 661
            VK+QGSCGSCW FSTTGA+EG + L TG L+SLSEQ+LVDCD         +   GC+GG M+ AFE+ +  GG+  E DYPYTG D G+C + + +  V S+  +  V  ++  +    ++  P++V +  +A+  Q Y  G+      + PY     ++H VL+VGYGS          + YWI+KNSWG SWG +G++ I +  ++    C ++++ S
Sbjct:  147 VKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKI-VASVSNFSVVSINEDQIAANLIKNGPLAVAI--NAAYMQTYIGGV------SCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNI----CGVDSLVS 354          

HSP 2 Score: 25.409 bits (54), Expect = 1.754e-38
Identity = 9/14 (64.29%), Postives = 9/14 (64.29%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P   DWR RG VTP
Sbjct:  133 PEEFDWRDRGAVTP 146          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 2.287e-38
Identity = 78/207 (37.68%), Postives = 123/207 (59.42%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSA-LLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSE-NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIEES 679
            VK+QG CGSCW F++   +E I  +  G+L+SLSEQ+++DC   SYGC GG+++ A+ ++I+N G+ + + YPY    GTC  T        I  Y  V+ ++   ++ A   QPI+  +  ++ +FQ Y  G++ G C      ++HA++I+GYG + +G+ +WIV+NSWG  WG  GY  + RD S  +G C I     YP  +S
Sbjct:  138 VKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC-AVSYGCKGGWINKAYSFIISNKGVASAAIYPYKAAKGTCK-TNGVPNSAYITRYTYVQRNNERNMMYAVSNQPIAAAL-DASGNFQHYKRGVFTGPCGT---RLNHAIVIIGYGQDSSGKKFWIVRNSWGAGWGEGGYIRLARDVSSSFGLCGIAMDPLYPTLQS 338          

HSP 2 Score: 23.0978 bits (48), Expect = 2.287e-38
Identity = 9/19 (47.37%), Postives = 10/19 (52.63%), Query Frame = 1
Query:    4 VQSCEAPSSLDWRKRGIVT 60
            V     P S+DWR  G VT
Sbjct:  118 VDISSVPQSIDWRDSGAVT 136          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 2.288e-38
Identity = 87/210 (41.43%), Postives = 118/210 (56.19%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSE----NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPI 670
            VK+QG C S W FS TG++EG     TG L+ LSEQ L+DC     ++ C GG+M  AF++V +NGG+ TE  YPY G    C     E    ++  +  +   + AL+ A  +  PISV +  S   FQ Y SGI Y   C     +++HAVL+VGYG E    +G  YW+VKNSWG  WG+ GY  I +D +     C I  +A+YPI
Sbjct:  129 VKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDCMGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGPGRKCRY-HAENSAANVRDFVQIPGREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKR--VHLNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGMKGYIKIAKDWN---NHCGIATLATYPI 332          

HSP 2 Score: 22.3274 bits (46), Expect = 2.288e-38
Identity = 8/14 (57.14%), Postives = 9/14 (64.29%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P  +DWR  G VTP
Sbjct:  115 PKYVDWRMLGYVTP 128          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.059e-38
Identity = 85/209 (40.67%), Postives = 118/209 (56.46%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIYN-GDCSNDPYYIDHAVLIVGYG----SENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            V+ QG C +CW F+ TGAIE      TG L  LS Q LVDC     + GC GG    AF++V++NGG+++E+ YPY G DG C    + +K   I G+  +  S+  L+ A A   PI+ G+  S   F+ Y  GIY+  +CS+D   + H VL+VGYG      +G  YW++KNSWG  WGI GY  + +D +     C I + A YP
Sbjct:  130 VRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPCRYNPKNSK-AEITGFVSLPQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDT--VTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKDKN---NHCGIASYAHYP 332          

HSP 2 Score: 26.1794 bits (56), Expect = 5.059e-38
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P  +DWRK+G VTP
Sbjct:  116 PKFVDWRKKGYVTP 129          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.582e-38
Identity = 87/221 (39.37%), Postives = 127/221 (57.47%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDC---------DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDG-TCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ-PISVGMVGSASDFQLYTSGIYNGDCSNDPYY----IDHAVLIVGYGSE-------NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMAS 661
            VK+QGSCGSCW FS TGA+EG N L TG L+SLSEQ+LVDC         D+   GC+GG M+ AFE+ +  GG+  E DYPYTG DG TC + K +  V S+  +  +   +  +    V+  P++V +  +A   Q Y  G+      + PY     ++H VL+VGYG+          + YWI+KNSWG +WG +G++ I +  ++    C +++M S
Sbjct:  150 VKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKI-VASVSNFSVISIDEEQIAANLVKNGPLAVAI--NAGYMQTYIGGV------SCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNI----CGVDSMVS 357          

HSP 2 Score: 23.483 bits (49), Expect = 6.582e-38
Identity = 8/14 (57.14%), Postives = 8/14 (57.14%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P   DWR  G VTP
Sbjct:  136 PEDFDWRDHGAVTP 149          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.835e-38
Identity = 85/220 (38.64%), Postives = 128/220 (58.18%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDC---------DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ-PISVGMVGSASDFQLYTSGIYNGDCSNDPY----YIDHAVLIVGYGSE-------NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMAS 661
            VK+QGSCGSCW FS +GA+EG + L TG L  LSEQ+ VDC         D+   GC+GG M  AF ++   GG+++E DYPYTG DG C   K +  V S+  +  V   ++ +    ++  P+++G+  +A+  Q Y  G+      + PY    ++DH VL+VGYG+          + YWI+KNSWG +WG +GY+ I R +++   KC +++M S
Sbjct:  152 VKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKCKFDKSKI-VASVQNFSVVSVDEAQISANLIKHGPLAIGI--NAAYMQTYIGGV------SCPYICGRHLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVR-NKCGVDSMVS 361          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.337e-37
Identity = 83/205 (40.49%), Postives = 117/205 (57.07%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            VK QGSCG+CW FS  GA+E    L TG L+SLS Q LVDC     + GC+GG+M  AF+++I+N GID+E+ YPY   D  C    +  +  +   Y ++      +L  AV    P+ VG+  S   F LY SG+Y          ++H VL++GYG  NG++YW+VKNSWG+++G  GY  + R+       C I +  SYP
Sbjct:  130 VKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQYDSKY-RAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQK--VNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARNKG---NHCGIASYPSYP 328          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 3.221e-37
Identity = 79/199 (39.70%), Postives = 107/199 (53.77%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCD----------TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGT-CNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSEN-----GEDYWIVKNSWGTSWGIDGYFYITR 613
            VK+QG CGSCW FSTTG +EG + +    L+SLSEQ LVDCD              GC+GG    A+ ++I NGGI TES YPYT   GT CN          I  +  + P +  ++   +     + +   A ++Q Y  G+++  C  +P  +DH +LIVGY ++N        YWIVKNSWG  WG  GY Y+ R
Sbjct:  133 VKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIG-AKISNFTMI-PKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPC--NPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRR 327          

HSP 2 Score: 26.1794 bits (56), Expect = 3.221e-37
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P++ DWR RG VTP
Sbjct:  119 PTAFDWRTRGAVTP 132          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.889e-37
Identity = 85/209 (40.67%), Postives = 122/209 (58.37%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIYN-GDCSNDPYYIDHAVLIVGYGSE----NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            V+ QG C SCW F  TGAIEG     TG LI LS Q L+DC     + GC  G    AF++V++NGG++ E+ YPY   +G C    + +    I G+  +  S+  L+ A A + PI+ G+   +S F+ Y  G+Y+   CS+   Y++HAVL+VGYG E    +G +YW++KNSWG  WG+ GY  I +D +     CAI ++A YP
Sbjct:  140 VRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKEGVCRYNPKNSS-AKITGFVVLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSS---YVNHAVLVVGYGFEGNETDGNNYWLIKNSWGKRWGLRGYMKIAKDRN---NHCAIASLAQYP 341          
The following BLAST results are available for this feature:
BLAST of DR405880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
CATJ_RAT6.096e-3939.71Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
A494_ARATH1.754e-3838.91Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
ANAN_ANACO2.287e-3837.68Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
TEST2_MOUSE2.288e-3841.43Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATR_MOUSE5.059e-3840.67Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
RD19A_ARATH6.582e-3839.37Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CYSP1_MAIZE7.835e-3838.64Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CATS_SAIBB1.337e-3740.49Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CYSP1_DICDI3.221e-3739.70Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATQ_RAT3.889e-3740.67Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248B01 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405880 ID=DR405880; Name=DR405880; organism=Citrus sinensis; type=EST; length=688bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTAGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGNNG
TTCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGA
CCTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCT
ATGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAAC
AACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGG
TACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTT
ATAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAA
CAACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATA
TACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTG
ATCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTAT
TGGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTT
TTACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATG
CTATGGCTTCTTATCCAATCGAAGAATCCTATGCACCA
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