DR405646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405646 vs. ExPASy Swiss-Prot
Match: RS103_ARATH (40S ribosomal protein S10-3 OS=Arabidopsis thaliana GN=RPS10C PE=2 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 2.598e-44 Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 3 Query: 249 IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKP 536 II E NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTNEGIEFLR YLNLPS++VPATLKK AKP Sbjct: 2 IISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP 97
BLAST of DR405646 vs. ExPASy Swiss-Prot
Match: RS101_ARATH (40S ribosomal protein S10-1 OS=Arabidopsis thaliana GN=RPS10A PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.393e-44 Identity = 83/96 (86.46%), Postives = 89/96 (92.71%), Query Frame = 3 Query: 249 IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKP 536 II E NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTNEGIEFLR YLNLPS++VPATLKK AKP Sbjct: 2 IISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP 97
BLAST of DR405646 vs. ExPASy Swiss-Prot
Match: RS10_ORYSJ (40S ribosomal protein S10 OS=Oryza sativa subsp. japonica GN=RPS10 PE=2 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 4.432e-44 Identity = 83/96 (86.46%), Postives = 89/96 (92.71%), Query Frame = 3 Query: 249 IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKP 536 IIP+KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTN+GIE LR YLNLPSEIVPATLKK A+P Sbjct: 2 IIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARP 97
BLAST of DR405646 vs. ExPASy Swiss-Prot
Match: RS102_ARATH (40S ribosomal protein S10-2 OS=Arabidopsis thaliana GN=RPS10B PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.689e-41 Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 3 Query: 249 IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKP 536 II E NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTNEGI+FLR YLNLPSEIVPATLKKQ KP Sbjct: 2 IISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKP 98
BLAST of DR405646 vs. ExPASy Swiss-Prot
Match: RS10_SPOFR (40S ribosomal protein S10 OS=Spodoptera frugiperda GN=RpS10 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.642e-30 Identity = 60/96 (62.50%), Postives = 79/96 (82.29%), Query Frame = 3 Query: 249 IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAK 533 ++P++NR I +YLF+EGV AKKDY+ KHP+++ +PNLQVIK MQS KS+ YV+E FAW H+YWYLTNEGIE+LR +L+LP EIVPATLK+ + Sbjct: 2 LMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 97
BLAST of DR405646 vs. ExPASy Swiss-Prot
Match: RS10_LUMRU (40S ribosomal protein S10 OS=Lumbricus rubellus GN=RPS10 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.642e-30 Identity = 60/96 (62.50%), Postives = 76/96 (79.17%), Query Frame = 3 Query: 249 IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKP 536 ++ +KNR I +YLF+EGV AKKD++L KH EIDVPNL VI+ MQS S+ YV+E F W HYYWYL NEGI++LR +L+LP EIVPATLK+Q +P Sbjct: 2 LMSKKNRVMIYEYLFKEGVLVAKKDFHLPKHGEIDVPNLHVIRAMQSLVSRGYVKEQFCWRHYYWYLQNEGIQYLRDFLHLPPEIVPATLKRQTRP 97
BLAST of DR405646 vs. ExPASy Swiss-Prot
Match: RS10_ICTPU (40S ribosomal protein S10 OS=Ictalurus punctatus GN=rps10 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.384e-29 Identity = 61/99 (61.62%), Postives = 79/99 (79.80%), Query Frame = 3 Query: 249 IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKP 536 ++P+KNR I + LF+EGV AKKD +LAKHPE+ +VPNL V+K MQS KS YV+E FAW H+YWYLTNEGI++LR +L+LP EIVPATL++Q +P Sbjct: 2 LMPKKNRIAIYELLFKEGVMVAKKDVHLAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRP 100
BLAST of DR405646 vs. ExPASy Swiss-Prot
Match: RS10_RAT (40S ribosomal protein S10 OS=Rattus norvegicus GN=Rps10 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.409e-28 Identity = 58/95 (61.05%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 249 IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKK 524 ++P+KNR I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KS+ YV+E FAW H+YWYLTNEGI++LR YL+LP EIVPATL++ Sbjct: 2 LMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRR 96
BLAST of DR405646 vs. ExPASy Swiss-Prot
Match: RS10_MOUSE (40S ribosomal protein S10 OS=Mus musculus GN=Rps10 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.409e-28 Identity = 58/95 (61.05%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 249 IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKK 524 ++P+KNR I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KS+ YV+E FAW H+YWYLTNEGI++LR YL+LP EIVPATL++ Sbjct: 2 LMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRR 96
BLAST of DR405646 vs. ExPASy Swiss-Prot
Match: RS10_HUMAN (40S ribosomal protein S10 OS=Homo sapiens GN=RPS10 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.409e-28 Identity = 58/95 (61.05%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 249 IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKK 524 ++P+KNR I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KS+ YV+E FAW H+YWYLTNEGI++LR YL+LP EIVPATL++ Sbjct: 2 LMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRR 96 The following BLAST results are available for this feature:
BLAST of DR405646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR405646 ID=DR405646; Name=DR405646; organism=Citrus sinensis; type=EST; length=609bpback to top |