CX070097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG1_BOVIN (Tubulin gamma-1 chain OS=Bos taurus GN=TUBG1 PE=2 SV=1) HSP 1 Score: 357.836 bits (917), Expect = 4.274e-98 Identity = 180/237 (75.95%), Postives = 207/237 (87.34%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 Q E SDVVVQPYNSLLTLKRLT NADCVVVLDNTALNRIA +RLH+QNP+F+Q N LVST+MSASTTTLRYPGYMNNDL+GL+ASLIPTPR HFLMTGYTPLT ++ +RKTTVLDVMRRLLQ KN+MVS+ R ++ + YI+ILNIIQGEVDPTQVH+SLQRIRERKL NFI WGPASIQVALSRKSPY+ +AHRVSGLM+A+HTSI LF + QY+KLRK++AFL+ +R Sbjct: 175 QDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVST-GRDRQTNHC-YIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFR 409
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG2_BOVIN (Tubulin gamma-2 chain OS=Bos taurus GN=TUBG2 PE=2 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 5.582e-98 Identity = 180/237 (75.95%), Postives = 206/237 (86.92%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 Q E SDVVVQPYNSLLTLKRLT NADCVVVLDNTALNRIA +RLH+QNP+F+Q N LVST+MSASTTTLRYPGYMNNDL+GL+ASLIPTPR HFLMTGYTPLT ++ +RKTTVLDVMRRLLQ KN+MVS+ R ++ + YI+ILNIIQGEVDPTQVH+SLQRIRERKL NFI WGPASIQVALSRKSPY+ +AHRVSGLM+A+HTSI LF QY+KLRK++AFL+ +R Sbjct: 175 QDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVST-GRDRQTNHC-YIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQYDKLRKREAFLEQFR 409
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG2_HUMAN (Tubulin gamma-2 chain OS=Homo sapiens GN=TUBG2 PE=1 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 2.770e-97 Identity = 179/237 (75.53%), Postives = 205/237 (86.50%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 Q E SDVVVQPYNSLLTLKRLT NADCVVVLDNTALNRIA +RLH+QNP+F+Q N LVST+MSASTTTLRYPGYMNNDL+GL+ASLIPTPR HFLMTGYTPLT ++ +RKTTVLDVMRRLLQ KN+MVS+ R ++ + YI+ILNIIQGEVDPTQVH+SLQRIRERKL NFI WGPASIQVALSRKSPY+ +AHRVSGLM+A+HTSI LF Q++KLRK+ AFL+ +R Sbjct: 175 QDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVST-GRDRQTNHC-YIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFR 409
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG1_CANFA (Tubulin gamma-1 chain OS=Canis familiaris GN=TUBG1 PE=2 SV=1) HSP 1 Score: 354.369 bits (908), Expect = 4.725e-97 Identity = 179/237 (75.53%), Postives = 204/237 (86.08%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 Q E SDVVVQPYNSLLTLKRLT NADCVVVLDNT LNRIA RLH+QNP+F Q N LVST+MSASTTTLRYPGYMNNDL+GL+ASLIPTPR HFLMTGYTPLT ++ +RKTTVLDVMRRLLQ KN+MVS+ R ++ + YI+ILNIIQGEVDPTQVH+SLQRIRERKL NFI WGPASIQVALSRKSPY+ +AHRVSGLM+A+HTSI LF + QY+KLRK++AFL+ +R Sbjct: 175 QDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTTLNRIATNRLHIQNPSFFQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVST-GRDRQTNHC-YIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFR 409
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG1_XENLA (Tubulin gamma-1 chain OS=Xenopus laevis GN=tubg1 PE=2 SV=1) HSP 1 Score: 353.984 bits (907), Expect = 6.171e-97 Identity = 178/237 (75.11%), Postives = 206/237 (86.92%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 Q E S VVVQPYNSLLTLKRLT NADCVVVLDNTALNRIA +RLH+QNP+F+Q N LVST+MSASTTTLRYPGYMNNDL+GL+ASLIPTPR HFLMTGYTPLT ++ +RKTTVLDVMRRLLQ KN+MVS+ R ++ + YI+ILNIIQGEVDPTQVH+SLQRIRERKL NFI WGPASIQVALSRKSPY+ +AHRVSGLM+A+HT+I LF + QY+KLRK++AFL+ +R Sbjct: 175 QDEMSHVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVST-GRDRQTNHC-YIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTNISSLFERTCRQYDKLRKREAFLEQFR 409
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG2_MOUSE (Tubulin gamma-2 chain OS=Mus musculus GN=Tubg2 PE=2 SV=1) HSP 1 Score: 352.829 bits (904), Expect = 1.375e-96 Identity = 179/237 (75.53%), Postives = 204/237 (86.08%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 Q E SDVVVQPYNSLLTLKRLT NADCVVVLDNTALNRIA +RLH+QNP+F+Q N LVST+MSASTTTLRYPGYMNNDL+GL+ASLIPTPR HFLMTGYTPLT ++ +RKTTVLDVMRRLLQ KN+MVS+ R ++ + YI+ILNIIQGEVDPTQVH+SLQRIRERKL NFI WGPASIQVALSRKSPY+ +AHRVSGLM+A+HTSI LF QY+KL K+ AFL+ +R Sbjct: 175 QDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVST-GRDRQTNHC-YIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQYDKLWKRGAFLEQFR 409
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG1_RAT (Tubulin gamma-1 chain OS=Rattus norvegicus GN=Tubg1 PE=2 SV=1) HSP 1 Score: 352.829 bits (904), Expect = 1.375e-96 Identity = 177/237 (74.68%), Postives = 206/237 (86.92%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 Q E SDVVVQPYNSLLTLKRLT NADCVVVLDNTALN IA +RLH+QNP+F+Q N LVST+MSASTTTLRYPGYMNNDL+GL+ASLIPTPR HFLMTGYTPLT ++ +RKTTVLDVMRRLLQ KN+MVS+ R ++ + YI+ILNIIQGEVDPTQVH+SLQRIRERKL NFI WGPASIQVALSRKSPY+ +AHRVSGLM+A+HTSI LF + Q++KLRK++AF++ +R Sbjct: 175 QDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNLIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVST-GRDRQTNHC-YIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQFDKLRKREAFMEQFR 409
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG1_MOUSE (Tubulin gamma-1 chain OS=Mus musculus GN=Tubg1 PE=1 SV=1) HSP 1 Score: 352.829 bits (904), Expect = 1.375e-96 Identity = 177/237 (74.68%), Postives = 206/237 (86.92%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 Q E SDVVVQPYNSLLTLKRLT NADCVVVLDNTALN IA +RLH+QNP+F+Q N LVST+MSASTTTLRYPGYMNNDL+GL+ASLIPTPR HFLMTGYTPLT ++ +RKTTVLDVMRRLLQ KN+MVS+ R ++ + YI+ILNIIQGEVDPTQVH+SLQRIRERKL NFI WGPASIQVALSRKSPY+ +AHRVSGLM+A+HTSI LF + Q++KLRK++AF++ +R Sbjct: 175 QDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNLIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVST-GRDRQTNHC-YIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQFDKLRKREAFMEQFR 409
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG2_DROME (Tubulin gamma-2 chain OS=Drosophila melanogaster GN=gammaTub37C PE=1 SV=3) HSP 1 Score: 337.421 bits (864), Expect = 5.977e-92 Identity = 174/238 (73.11%), Postives = 200/238 (84.03%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANV-IRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 Q E SDVVVQPYNS+LTLKRLT AD VVVLDNTALNRIA ERLH+Q PTF Q N+LVST+MS STTTLRYP YMNN+L+GL ASLIPTP+ HFLMTGYTPL + + +RKTTVLDVMRRLLQ KN+MVS A T + S+ ++SILNIIQGEVDP+QVH+SLQRIRERKL NFI WGPASIQVAL R SPYVQ+AH+VSGLM+A+HT I LF + L+QY+KLRK+ AFLDN+R Sbjct: 175 QDEISDVVVQPYNSILTLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVS--ALTDKQSRQCFVSILNIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGLMMANHTGISSLFKRALAQYDKLRKRNAFLDNFR 410
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_DICDI (Tubulin gamma chain OS=Dictyostelium discoideum GN=tubC PE=1 SV=1) HSP 1 Score: 335.109 bits (858), Expect = 2.967e-91 Identity = 165/234 (70.51%), Postives = 198/234 (84.62%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + S VVVQ YNS+LTLKRL NAD VVLDN AL+RI E L + PT QTNSLVSTVMSASTTTLRYPGYMNNDLVG+LASLIPTP+CHFL+TGYTPL+++RQ +RKT+VLDVMRRLLQ +NIMVS+ +T KYISILNIIQG+VDPTQ+H SLQRIRE+++ FI+WGPASIQ+ALS+KSPY++++H+VSGLMLA+HTS+ HLFS + QY+K+RKKQAFL NY Sbjct: 174 DDSSVVVQQYNSVLTLKRLIENADSTVVLDNNALHRIVGENLRIDQPTMDQTNSLVSTVMSASTTTLRYPGYMNNDLVGMLASLIPTPKCHFLITGYTPLSIDRQTESVRKTSVLDVMRRLLQPQNIMVSAPTKT-----GKYISILNIIQGDVDPTQIHNSLQRIREKRMATFIDWGPASIQIALSKKSPYIKSSHKVSGLMLANHTSVNHLFSHIIQQYDKVRKKQAFLANY 402 The following BLAST results are available for this feature:
BLAST of CX070097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 417
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070097 ID=CX070097; Name=CX070097; organism=Citrus sinensis; type=EST; length=848bpback to top |