CX070097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG1_ARATH (Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=TUBG1 PE=2 SV=1) HSP 1 Score: 454.136 bits (1167), Expect = 4.382e-127 Identity = 232/237 (97.89%), Postives = 234/237 (98.73%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTAL RIAVERLHL NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYAR KEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS+KSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQY+KLRKKQAFLDNYR Sbjct: 175 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYDKLRKKQAFLDNYR 411
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1) HSP 1 Score: 452.981 bits (1164), Expect = 9.762e-127 Identity = 230/237 (97.05%), Postives = 235/237 (99.16%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHL NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYAR KEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFI+WGPASIQVALS+KSPYVQT+HRVSGLMLASHTSIRHLFS+CLSQY+KLRKKQAFLDNYR Sbjct: 175 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGLMLASHTSIRHLFSRCLSQYDKLRKKQAFLDNYR 411
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG2_ORYSJ (Tubulin gamma-2 chain OS=Oryza sativa subsp. japonica GN=TUBG2 PE=2 SV=1) HSP 1 Score: 451.825 bits (1161), Expect = 2.175e-126 Identity = 230/237 (97.05%), Postives = 232/237 (97.89%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHL NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQ N+IRKTTVLDVMRRLLQTKNIMVSSYAR KEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQT HRVSGLMLA+HTSIRHLFSKCL QYEKLRKKQAFLDNYR Sbjct: 175 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYR 411
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_PHYPA (Tubulin gamma chain OS=Physcomitrella patens GN=TUBG1 PE=3 SV=1) HSP 1 Score: 450.284 bits (1157), Expect = 6.327e-126 Identity = 228/237 (96.20%), Postives = 233/237 (98.31%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAV+RLH+ NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGL+ASLIPTPRCHFLMTGYTPLTVERQAN IRKTTVLDVMRRLLQ KNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVH+SLQRIRERKL NFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKC+SQYEKLRKKQAFLDNYR Sbjct: 175 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLHIPNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTVERQANAIRKTTVLDVMRRLLQAKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHKSLQRIRERKLANFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCISQYEKLRKKQAFLDNYR 411
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG3_MAIZE (Tubulin gamma-3 chain (Fragment) OS=Zea mays GN=TUBG3 PE=2 SV=1) HSP 1 Score: 449.129 bits (1154), Expect = 1.410e-125 Identity = 228/237 (96.20%), Postives = 232/237 (97.89%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 Q+ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHL NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQ N+IRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFI+W PASIQVALSRKSPYVQT HRVSGLMLA+HTSIRHLFSKCL QYEKLRKKQAFLDNYR Sbjct: 127 QVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWAPASIQVALSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYR 363
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG2_MAIZE (Tubulin gamma-2 chain OS=Zea mays GN=TUBG2 PE=2 SV=1) HSP 1 Score: 448.743 bits (1153), Expect = 1.841e-125 Identity = 227/237 (95.78%), Postives = 231/237 (97.47%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHL NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQ N+IRKTTVLDVMRRLLQTKN+MVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFI+W PASIQVALSRKSPYVQT HRVSGLMLA+HTSIRHLF KCL QYEKLRKKQAFLDNYR Sbjct: 175 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNVMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWAPASIQVALSRKSPYVQTTHRVSGLMLANHTSIRHLFGKCLGQYEKLRKKQAFLDNYR 411
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG1_MAIZE (Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV=1) HSP 1 Score: 447.588 bits (1150), Expect = 4.101e-125 Identity = 228/237 (96.20%), Postives = 231/237 (97.47%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 Q+ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHL NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQ N+IRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFI W PASIQVALSRKSPYVQT HRVSGLMLA+HTSIRHLFSKCL QYEKLRKKQAFLDNYR Sbjct: 175 QVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIYWAPASIQVALSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYR 411
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_ANEPH (Tubulin gamma chain OS=Anemia phyllitidis GN=TUBG PE=2 SV=1) HSP 1 Score: 443.736 bits (1140), Expect = 5.922e-124 Identity = 226/238 (94.96%), Postives = 233/238 (97.90%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTL-KRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 QMETSDVVVQPYNSLLTL KRLT+NADCVVVLDNTALNRIAV+RLH+ NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGL+ASLIPTPRCHFLMTGYTPLTVERQAN IRKTTVLDVMRRLLQ KNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVH+SLQRIRERKL NFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKC++QYEKLRKKQAFLDNYR Sbjct: 175 QMETSDVVVQPYNSLLTLNKRLTINADCVVVLDNTALNRIAVDRLHIPNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTVERQANAIRKTTVLDVMRRLLQAKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHKSLQRIRERKLANFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCINQYEKLRKKQAFLDNYR 412
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_CHLRE (Tubulin gamma chain OS=Chlamydomonas reinhardtii GN=TUBG PE=3 SV=1) HSP 1 Score: 365.54 bits (937), Expect = 2.050e-100 Identity = 188/245 (76.73%), Postives = 213/245 (86.94%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANV----IRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKL----RKKQAFLDNYR 848 Q E+SDVVVQPYNSLLTLKRLTL+AD VVVLDNTAL++IAVERLHL P Q NSL++TVM+ASTTTLRYPGYMNNDLVGL+ASLIPTPRCHFLMTGYTPLT E A IRKTTVLDVMRRLLQ KNIMVS++ ++++ + AKYISILNIIQGEVDP+QVH+SLQRIRERK NFIEWGPASIQVALS+KSPYVQTAHRVSGLMLA+HTS+RHLF+K L YEKL +++QAF+ YR Sbjct: 175 QSESSDVVVQPYNSLLTLKRLTLHADAVVVLDNTALDKIAVERLHLHKPDVQQINSLIATVMAASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTAENAAGQVTSNIRKTTVLDVMRRLLQPKNIMVSTHTKSRDIANAKYISILNIIQGEVDPSQVHKSLQRIRERKQANFIEWGPASIQVALSKKSPYVQTAHRVSGLMLANHTSVRHLFNKVLRDYEKLMGPKQERQAFMQAYR 419
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG1_HUMAN (Tubulin gamma-1 chain OS=Homo sapiens GN=TUBG1 PE=1 SV=2) HSP 1 Score: 357.836 bits (917), Expect = 4.274e-98 Identity = 180/237 (75.95%), Postives = 207/237 (87.34%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 Q E SDVVVQPYNSLLTLKRLT NADCVVVLDNTALNRIA +RLH+QNP+F+Q N LVST+MSASTTTLRYPGYMNNDL+GL+ASLIPTPR HFLMTGYTPLT ++ +RKTTVLDVMRRLLQ KN+MVS+ R ++ + YI+ILNIIQGEVDPTQVH+SLQRIRERKL NFI WGPASIQVALSRKSPY+ +AHRVSGLM+A+HTSI LF + QY+KLRK++AFL+ +R Sbjct: 175 QDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVST-GRDRQTNHC-YIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFR 409 The following BLAST results are available for this feature:
BLAST of CX070097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 417
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070097 ID=CX070097; Name=CX070097; organism=Citrus sinensis; type=EST; length=848bpback to top |