CX070097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB6_CHICK (Tubulin beta-6 chain OS=Gallus gallus PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.186e-31 Identity = 75/234 (32.05%), Postives = 131/234 (55.98%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN++L++ +L N D +DN AL I L L NPT+ N LVS MS TT+LR+PG +N DL L +++P PR HF M G+ PLT R + R +V ++ +++ +N+M + R + +Y+++ I +G + +V E L ++ + F+EW P +++VA+ P +++ + ++T+I+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNAILSIHQLIENTDETFCIDNEALYDICFRTLKLTNPTYGDLNHLVSLTMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA-RGSQQYRALSVPELTQQMFDARNMMAACDPR-----RGRYLTVACIFRGRMSTREVDEQLLSVQTKNSSYFVEWIPNNVKVAVCDIPP---RGLKMAATFIGNNTAIQELFIRVSEQFSAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB4_WHEAT (Tubulin beta-4 chain OS=Triticum aestivum GN=TUBB4 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.186e-31 Identity = 76/234 (32.48%), Postives = 131/234 (55.98%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L NAD +VLDN AL I L L P+F + N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + + R TV ++ +++ KN+M ++ R +Y++ +G++ +V E + ++ + F+EW P +++ ++ P +++G + + TSI+ +F + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPSFGELNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQMYRALTVPELTQQMWDAKNMMCAADPR-----HGRYLTASACFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDMPP---RGLKMAGTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB3_WHEAT (Tubulin beta-3 chain OS=Triticum aestivum GN=TUBB3 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.186e-31 Identity = 78/234 (33.33%), Postives = 130/234 (55.56%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L NAD +VLDN AL I L L PTF N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R TV ++ +++ +KN+M ++ R +Y++ + +G++ +V E + ++ + F+EW P +++ ++ P T +S + + TSI+ +F + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDSKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP---TGLSMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB3_CHICK (Tubulin beta-3 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.186e-31 Identity = 75/234 (32.05%), Postives = 125/234 (53.42%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N D +DN AL I L L PT+ N LVS MS TT LR+PG +N DL L +++P PR HF M G+ PLT R + R TV D+ +++ KN+M + E +Y+++ + +G + +V E + ++ + F+EW P +++ A+ P ++S + + T+I+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT-SRGSQQYRALTVPDLTQQMFDAKNMMAAC-----EPGHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP---RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB2_PHYPO (Tubulin beta-2 chain OS=Physarum polycephalum GN=BETC PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.186e-31 Identity = 79/234 (33.76%), Postives = 130/234 (55.56%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L NAD V+ +DN AL I L L PT+ N LVS VMS T LR+PG +N+DL L +LIP PR HF + GY PLT R A R TV ++ +++ ++N+M +S R +Y++ +G++ +V E + ++ + F+EW P +I+ ++ P ++S + ++T I+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSIHQLVENADEVMCIDNEALYDICFRTLKLTTPTYGDLNHLVSGVMSGITACLRFPGQLNSDLRKLAVNLIPFPRLHFFLIGYAPLTA-RSAMGFRALTVPELTQQIFDSRNMMAASDPR-----HGRYLTASATFRGKMSTKEVDEQMHAVQTKNSSFFVEWIPNNIKSSVCDIPP---KGMKMSATFIGNNTCIQELFKRIGLQFSAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB3_ECHMU (Tubulin beta-3 chain OS=Echinococcus multilocularis GN=TUB-3 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 72/231 (31.17%), Postives = 129/231 (55.84%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFL 836 + SD VV+PYN+ L++ +L + D +DN AL I L L NP ++ N LVS MS TT+LR+PG +N+DL L +++P PR HF + G+ PL R + + T+L++ R++ KN+M + + S +Y+++ + +G V +V + + + R F+EW P +++ A+ P +V+G + + T+I+ LF++ Q+ + +++AFL Sbjct: 174 KVSDTVVEPYNATLSVHQLVESTDETFCIDNEALYDICFRTLKLPNPNYSDLNHLVSLTMSGVTTSLRFPGQLNSDLRKLAVNMVPFPRLHFFVPGFAPL-ASRTSQSYQSCTILELTRQMFDAKNMMAAC-----DPSHGRYLTVAAMYRGRVSMKEVEDRILETQTRNSTYFVEWIPNNVKTAVCDIPP---IDFKVAGTFIGNTTAIQELFTRVSDQFSAMFRRRAFL 395
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_AJECA (Tubulin beta chain OS=Ajellomyces capsulata GN=TUB2 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 77/234 (32.91%), Postives = 128/234 (54.70%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L+ +L N+D +DN AL I + L L P++ N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT R A R TV ++ +++ KN+M + +Y++ I +G+V +V + ++ ++ + F+EW P ++Q AL P ++S + + T+I+ LF + Q+ + +++AFL Y Sbjct: 175 KVSDTVVEPYNATLSNHQLVENSDETFCIDNEALYDICMRTLKLSEPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAYSFRVVTVPELTQKMYDPKNMMC-----LLDFRNGRYLTASAIFRGKVSMKEVEDQMRNVQNKNHTYFVEWIPNNVQTALCSIPP---RGLKMSSTFVENSTAIQELFKRVGDQFTAMFRRKAFLHWY 399
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB3_ELEIN (Tubulin beta-3 chain OS=Eleusine indica GN=TUBB3 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 78/234 (33.33%), Postives = 129/234 (55.13%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L NAD +VLDN AL I L L PTF N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R TV ++ +++ KN+M ++ R +Y++ + +G++ +V E + ++ + F+EW P +++ ++ P T +S + + TSI+ +F + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRSLTVPELTQQMWDAKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLT---MSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB2_PEA (Tubulin beta-2 chain (Fragment) OS=Pisum sativum GN=TUBB2 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 76/234 (32.48%), Postives = 130/234 (55.56%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L NAD +VLDN AL I L L P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R +V ++ +++ +KN+M ++ R +Y++ I +G++ +V E + ++ + F+EW P +++ + P T +++ + + TSI+ +F + Q+ + +++AFL Y Sbjct: 172 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMLGFAPLT-SRGSQQYRALSVPEITQQMWDSKNMMCAADPR-----HGRYLTASAIFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPP---TGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 396
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB1_BRUPA (Tubulin beta-1 chain OS=Brugia pahangi PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 74/234 (31.62%), Postives = 127/234 (54.27%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SDVV++PYN+ L++ +L N D +DN AL I L L NPT+ N LVS MS TT LR+PG +N DL L +++P PR HF M G+ PL+ R A R V ++ +++ KN+M + R +Y+++ + +G + +V E + +++ + F+EW P +++ A+ P ++S + + T+I+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDVVLEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLANPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSA-RDAAAYRALNVAELTQQMFDAKNMMAACDPR-----HGRYLTVAAMFRGRMSMREVDEQMMQVQNKNSSYFVEWIPNNVKTAVCDIPP---RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWY 398 The following BLAST results are available for this feature:
BLAST of CX070097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 417
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070097 ID=CX070097; Name=CX070097; organism=Citrus sinensis; type=EST; length=848bpback to top |