CX070097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB7_MAIZE (Tubulin beta-7 chain OS=Zea mays GN=TUBB7 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.641e-31 Identity = 77/234 (32.91%), Postives = 130/234 (55.56%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L NAD +VLDN AL I L L PTF N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R TV ++ +++ +KN+M ++ R +Y++ + +G++ +V E + ++ + F+EW P +++ ++ P ++S + + TSI+ +F + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDSKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP---IGLKMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB7_ARATH (Tubulin beta-7 chain OS=Arabidopsis thaliana GN=TUBB7 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.641e-31 Identity = 76/234 (32.48%), Postives = 129/234 (55.13%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L NAD +VLDN AL I L L P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R TV ++ +++ KN+M ++ R +Y++ + +G++ +V E + ++ + F+EW P +++ + P T +++ + + TSI+ +F + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRNLTVPELTQQMWDAKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPP---TGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB6_BOVIN (Tubulin beta-6 chain OS=Bos taurus GN=TUBB6 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.641e-31 Identity = 75/231 (32.47%), Postives = 126/231 (54.55%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFL 836 + SD VV+PYN+ L++ +L N D +DN AL I L L PT+ N LVS MS TT+LR+PG +N DL L +++P PR HF M G+ PLT R + R TV ++ +++ KN+M + R +Y+++ + +G + +V E + I+ + F+EW P +++VA+ P ++S + + T+I+ LF + Q+ + +++AFL Sbjct: 174 KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA-RGSQQYRALTVPELTQQMFDAKNMMAACDPR-----HGRYLTVAAVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPP---RGLKMSATFIGNSTAIQELFKRISEQFSAMFRRKAFL 395
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB4_ARATH (Tubulin beta-4 chain OS=Arabidopsis thaliana GN=TUBB4 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 2.641e-31 Identity = 76/234 (32.48%), Postives = 130/234 (55.56%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L NAD +VLDN AL I L L NPTF N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + +V ++ +++ KN+M ++ R +Y++ + +G++ +V E + I+ + F+EW P +++ ++ +P +++ + + TSI+ +F + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYSALSVPELTQQMWDAKNMMCAADPR-----HGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVCDIAP---KGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB2_ARATH (Tubulin beta-2/beta-3 chain OS=Arabidopsis thaliana GN=TUBB2 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.641e-31 Identity = 76/234 (32.48%), Postives = 130/234 (55.56%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L NAD +VLDN AL I L L P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R TV ++ +++ +KN+M ++ R +Y++ + +G++ +V E + ++ + F+EW P +++ + P T +++ + + TSI+ +F + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRSLTVPELTQQMWDSKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPP---TGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB1_HOMAM (Tubulin beta-1 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.641e-31 Identity = 76/234 (32.48%), Postives = 125/234 (53.42%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N D +DN AL I L LQNPT+ N LVS MS TT R+PG +N DL L +++P PR HF M G+ PLT R + R TV ++ +++ KN+M + R +Y+++ I +G + +V E + I+ + F+EW P +++ A+ P +++ + + T+I LF + Q+ + +++AFL Y Sbjct: 178 KVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLQNPTYGDLNHLVSLTMSGVTTCFRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA-RGSQQYRALTVPELTQQMFDAKNMMAACDPR-----HGRYLTVAAIFRGRMSMKEVDEQMYNIQNKNSSFFVEWIPNNVKTAVCDIPP---RGIKMASTFIGNSTAIHELFKRVGEQFTAMFRRKAFLHWY 402
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_NAEGR (Tubulin beta chain OS=Naegleria gruberi PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.450e-31 Identity = 77/234 (32.91%), Postives = 129/234 (55.13%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L NAD V+ +DN AL I L L PTF N LVS VMS T LR+PG +N+DL L +LIP PR HF + G+ PLT R + R TV ++ +++ KN+M +S R +Y++ + +G + +V E + ++ + F+EW P +I+ ++ P +++ + + T+I+ +F + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDICFRTLKLTTPTFGDLNHLVSIVMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFLIGFAPLT-SRGSQQYRALTVPELTQQMFDAKNMMAASDPR-----HGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPP---RGLKMAATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_EUPCR (Tubulin beta chain OS=Euplotes crassus PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.450e-31 Identity = 76/234 (32.48%), Postives = 130/234 (55.56%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L NAD V+V+DN AL I L L PT+ N LVS +S T+ LR+PG +N+DL L +LIP PR HF M G+ PLT R + R TV ++ +++ KN+M +S R +Y++ + +G + +V E + ++ + F+EW P +I+ ++ P +++ + + T+I+ +F + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTSCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMFDAKNMMCASDPR-----HGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPP---KGLKLASTFIGNSTAIQEMFKRVAEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB7_GOSHI (Tubulin beta-7 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.450e-31 Identity = 75/234 (32.05%), Postives = 130/234 (55.56%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N D +VLDN AL I L L NP+F N L+ST MS +T LR+PG +N+DL L +LIP PR HF M G+ PLT + R T+ ++ +++ +N+M ++ R +Y++ + +G++ +V E + ++ + F+EW P +++ ++ P T +S + + TSI+ +F + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENGDECMVLDNEALYDICFRTLKLTNPSFGDLNRLISTTMSGATCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SSSSQQYRALTIPELTQQMWDARNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---TGLTMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB6_MOUSE (Tubulin beta-6 chain OS=Mus musculus GN=Tubb6 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.450e-31 Identity = 74/231 (32.03%), Postives = 126/231 (54.55%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFL 836 + SD VV+PYN+ L++ +L N D +DN AL I L L PT+ N LVS MS TT+LR+PG +N DL L +++P PR HF M G+ PLT R + R TV ++ +++ KN+M + R +Y+++ + +G + +V E + I+ + F+EW P +++VA+ P +++ + + T+I+ LF + Q+ + +++AFL Sbjct: 174 KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA-RGSQQYRALTVPELTQQMFDAKNMMAACDPR-----HGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPP---RGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFL 395 The following BLAST results are available for this feature:
BLAST of CX070097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 417
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070097 ID=CX070097; Name=CX070097; organism=Citrus sinensis; type=EST; length=848bpback to top |