CX070097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_SCHJP (Tubulin gamma chain OS=Schizosaccharomyces japonicus GN=tug1 PE=3 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 2.511e-90 Identity = 173/235 (73.62%), Postives = 190/235 (80.85%), Query Frame = 3 Query: 150 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVER--QANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 SDVVVQPYNSLLTLKRLTLNAD VVVLDN AL IA +RLH+QNPTF Q N LVSTVMSASTTTLRYPGYMNNDLV ++ASLIPTPRCHFL T YTP T ++ A IRKTTVLDVMRRLLQ KN MVS Q+ +ISILNIIQGE DP VH+SL RIRERKL FI WGPASIQVALS+KSPY++T HRVSGLMLA+HTSI LF + L QY++LRK+ AFLD YR Sbjct: 179 SDVVVQPYNSLLTLKRLTLNADAVVVLDNAALAHIAADRLHIQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPTPRCHFLSTSYTPFTSQQVEDARTIRKTTVLDVMRRLLQPKNRMVS----VNPGKQSCFISILNIIQGEADPNDVHKSLLRIRERKLATFIPWGPASIQVALSKKSPYIKTNHRVSGLMLANHTSIASLFKRTLDQYDRLRKRNAFLDQYR 409
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG1_EUPOC (Tubulin gamma-1 chain OS=Euplotes octocarinatus PE=2 SV=2) HSP 1 Score: 331.643 bits (849), Expect = 3.280e-90 Identity = 162/233 (69.53%), Postives = 196/233 (84.12%), Query Frame = 3 Query: 150 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 +DVVVQPYN LL++KRLTLNADCVVVLDN AL IAV+RL + PTF+Q NS+VSTVM+ASTTTLRYPGYMNND+VGL+ASL+PTPRCHFLMTGYTPL+++++ N +RKTTVLDVMRRLLQTKNIMV T + Y+SILN+IQG+VDPTQVH+SLQRIRERKL NFI WGPASIQVALS+KSPY+ + H+VSGLMLA+HT IR +F QY RK+ A+++ ++ Sbjct: 176 NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQKFNSVRKTTVLDVMRRLLQTKNIMV-----TGAVKKGAYMSILNVIQGDVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSKKSPYIDSGHKVSGLMLANHTGIRSIFKVLYDQYRTFRKRDAYMNIFK 403
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG2_EUPOC (Tubulin gamma-2 chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 329.331 bits (843), Expect = 1.628e-89 Identity = 161/233 (69.10%), Postives = 195/233 (83.69%), Query Frame = 3 Query: 150 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 +DVVVQPYN LL++KRLTLNADCVVVLDN AL IAV+RL + PTF+Q NS+VSTVM+ASTTTLRYPGYMNND+VGL+ASL+PTPRCHFLMTGYTPL+++++ +RKTTVLDVMRRLLQTKNIMV T + Y+SILN+IQG+VDPTQVH+SLQRIRERKL NFI WGPASIQVALS+KSPY+ + H+VSGLMLA+HT IR +F QY RK+ A+++ ++ Sbjct: 176 NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQKFTSVRKTTVLDVMRRLLQTKNIMV-----TGAVKKGAYMSILNVIQGDVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSKKSPYIDSGHKVSGLMLANHTGIRSIFKVLYDQYRTFRKRDAYMNIFK 403
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG1_DROME (Tubulin gamma-1 chain OS=Drosophila melanogaster GN=gammaTub23C PE=1 SV=2) HSP 1 Score: 329.331 bits (843), Expect = 1.628e-89 Identity = 172/242 (71.07%), Postives = 200/242 (82.64%), Query Frame = 3 Query: 138 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVE-----RQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 Q E SDVVVQPYNS+LTLKRLT AD VVVLDNTALNRIA +RLH+QNP+F+Q N+LVST+MS STTTLRYP YMNN+L+GL A LIPTP+ HFLMTGYTPLT + +Q +RKTTVLDVMRRLLQ KN+MVS+ +++ YISILNIIQGEVDPTQVH+SLQRIR+RK+ FI WGP SIQVALSR SPYVQ+ HRVSGLMLA+HTSI LF + L+QY+KLRK+ AFLD +R Sbjct: 175 QDEISDVVVQPYNSMLTLKRLTTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLIPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVST--GPDKSNHHCYISILNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGLMLANHTSICSLFERALNQYDKLRKRGAFLDQFR 414
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_EUPAE (Tubulin gamma chain OS=Euplotes aediculatus PE=2 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 3.070e-88 Identity = 158/233 (67.81%), Postives = 194/233 (83.26%), Query Frame = 3 Query: 150 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 +DVVVQPYN LL++KRLTLNADCVVVLDN AL IAV+RL + PTF+Q NS+VSTVM+ASTTTLRYPGYMNND+VGL+ASL+PTPRCHFLMTGYTPL+++++ +RKTT LDVMRRLLQTKNIMV T + Y+SILN+IQG+VDPTQVH+SLQRI+ERKL NFI WGPASIQVAL++KSPY+ + H+VSGLMLA+HT IR +F QY RK+ A+++ ++ Sbjct: 176 NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQKYTSVRKTTFLDVMRRLLQTKNIMV-----TGAVKKGAYMSILNVIQGDVDPTQVHKSLQRIKERKLANFIPWGPASIQVALAKKSPYIDSGHKVSGLMLANHTGIRSIFKVLYDQYRTFRKRDAYMNIFK 403
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG1_EUPCR (Tubulin gamma-1 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 3.070e-88 Identity = 163/234 (69.66%), Postives = 194/234 (82.91%), Query Frame = 3 Query: 150 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLT-VERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 +DVVVQPYN LL++KRL LNADCVVVLDNTAL IAV+RL L PTF Q NS+VSTVM+ASTTTLRYPGYMNNDLVGL+ASL+PTPRCHFLMTGYTPL+ ++++ +RKTTVLDVMRRLLQTKNIM T + Y+SILNIIQG+VDPTQVH+SLQRIRERKL NFI WGPASIQVALS+KSPY+++ H+VSGLMLA+HT IR +F QY RK+ A+++ ++ Sbjct: 176 NDVVVQPYNCLLSMKRLILNADCVVVLDNTALTSIAVDRLKLLQPTFPQINSIVSTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPLSLIDQKVTSVRKTTVLDVMRRLLQTKNIMA-----TGAIKKGAYMSILNIIQGDVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSKKSPYMESGHKVSGLMLANHTGIRSIFKVIYDQYRTFRKRDAYMNIFK 404
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG2_EUPCR (Tubulin gamma-2 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 322.398 bits (825), Expect = 1.990e-87 Identity = 160/234 (68.38%), Postives = 196/234 (83.76%), Query Frame = 3 Query: 150 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTV-ERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 +D+VVQPYN +L++KRL LNADCVVVLDNTA+ IAV+RL L +PT +Q NS+VSTVM+ASTTTLRYPGYMNNDLVGL+ASL+PTPRCHFLMTGYTPL++ +++ + IRKTTVLDVMRRLLQT+NIM S + + Y+SILNIIQG+VDPTQVH+SLQRIRER + NFI WGPASIQVALS+KSPY+++ ++VSGLMLA+HT IR +F QY + RK+ AFL YR Sbjct: 176 NDIVVQPYNCILSMKRLVLNADCVVVLDNTAITSIAVDRLKLLHPTISQVNSIVSTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPLSLNDQKVSSIRKTTVLDVMRRLLQTRNIMTSGAIK-----KGAYMSILNIIQGDVDPTQVHKSLQRIRERNVANFIPWGPASIQVALSKKSPYIESDNKVSGLMLANHTGIRSIFQVLYGQYRQFRKRDAFLGTYR 404
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_SCHPO (Tubulin gamma chain OS=Schizosaccharomyces pombe GN=tug1 PE=2 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 6.401e-86 Identity = 164/235 (69.79%), Postives = 190/235 (80.85%), Query Frame = 3 Query: 150 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVER--QANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 SDVVVQPYNSLL LKRLTLNAD VVVLDN AL IA +RLH QNPTF Q N LVSTVMSASTTTLRYPGYMNNDLV ++ASLIP+PRCHFL+T YTP T ++ +A IRKTTVLDVMRRLL KN MVS + ++ +ISIL+IIQGE DP VH+SL RIRER+ +FI WGPASIQVALS+KSPY++T HRVSGLMLA+HTSI LF + L QY++LRK+ AFL+ Y+ Sbjct: 179 SDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVS----VNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGLMLANHTSIASLFKRTLDQYDRLRKRNAFLEQYK 409
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_EMENI (Tubulin gamma chain OS=Emericella nidulans GN=mipA PE=2 SV=2) HSP 1 Score: 316.62 bits (810), Expect = 1.092e-85 Identity = 160/237 (67.51%), Postives = 191/237 (80.59%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVER--QANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 + +DVVV PYNSLL ++RLT NAD VVVLDN AL+RI +RLH+Q P+F QTN LVSTVMSASTTTLRYPGYM+NDLVG++ASLIPTPR HFL+T YTP T + QA +RKTTVLDVMRRLLQ KN MVS + + YISILNIIQGE DPT VH+SL RIRER+L +FI WGPASIQVAL++KSPY+Q HRVSGLMLA+HTS+ LF + + QY++LRK+ AFL+ Y+ Sbjct: 176 QAADVVVNPYNSLLAMRRLTQNADSVVVLDNAALSRIVADRLHVQEPSFQQTNRLVSTVMSASTTTLRYPGYMHNDLVGIIASLIPTPRSHFLLTSYTPFTGDNIDQAKTVRKTTVLDVMRRLLQPKNRMVS----INPSKSSCYISILNIIQGEADPTDVHKSLLRIRERRLASFIPWGPASIQVALTKKSPYIQNTHRVSGLMLANHTSVATLFKRIVQQYDRLRKRNAFLEQYK 408
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 2.432e-85 Identity = 162/237 (68.35%), Postives = 192/237 (81.01%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVER--QANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 + DVVVQPYNSLL LKRL +AD VVVLDN AL RI+ +RLH+Q P+F QTN LVSTV++AST TLRYPGYMNNDLVG++ASLIPTPRCHFLMT YTP T ++ +A IR+TTVLDVMRRLLQ KN MV T + A YISILNIIQGEVDPT VH+SL RIRER+L NFI WGPASIQVAL+++SPYV T HRVSGLMLA+HTS+ LF + L Q+++LRK+ AF++ Y+ Sbjct: 176 QEGDVVVQPYNSLLALKRLVNHADSVVVLDNGALARISADRLHVQTPSFDQTNQLVSTVIAASTQTLRYPGYMNNDLVGIIASLIPTPRCHFLMTSYTPFTSDQIDKAKTIRRTTVLDVMRRLLQPKNRMV----LTTPSKTACYISILNIIQGEVDPTDVHQSLLRIRERQLANFIPWGPASIQVALTKRSPYVTTNHRVSGLMLANHTSVASLFKRMLDQFDRLRKRNAFIEQYK 408 The following BLAST results are available for this feature:
BLAST of CX070097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 417
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070097 ID=CX070097; Name=CX070097; organism=Citrus sinensis; type=EST; length=848bpback to top |